RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 TNNQ9UQP3 1299 aa28.62■■■□□ 2.17
CCDC61-207ENST00000599044 ARAP2Q8WZ64 1704 aa28.62■■■□□ 2.17
CCDC61-207ENST00000599044 USP2O75604 605 aaPredicted RBP28.61■■■□□ 2.17
CCDC61-207ENST00000599044 RGS19P49795 217 aa28.61■■■□□ 2.17
CCDC61-207ENST00000599044 SUPT20HL1Q3ZLR7 823 aa28.61■■■□□ 2.17
CCDC61-207ENST00000599044 PA2G4Q9UQ80 394 aaKnown RBP28.61■■■□□ 2.17
CCDC61-207ENST00000599044 LPIN2Q92539 896 aa28.6■■■□□ 2.17
CCDC61-207ENST00000599044 KIF16BQ96L93 1317 aa28.6■■■□□ 2.17
CCDC61-207ENST00000599044 TCP10L2B9ZVM9 353 aa28.59■■■□□ 2.17
CCDC61-207ENST00000599044 PPP1R12BO60237 982 aaPredicted RBP28.59■■■□□ 2.17
CCDC61-207ENST00000599044 INTS3Q68E01 1043 aaKnown RBP28.59■■■□□ 2.17
CCDC61-207ENST00000599044 TBC1D22AQ8WUA7 517 aa28.59■■■□□ 2.17
CCDC61-207ENST00000599044 ARHGAP45Q92619 1136 aa28.59■■■□□ 2.17
CCDC61-207ENST00000599044 SLC10A4Q96EP9 437 aa28.59■■■□□ 2.17
CCDC61-207ENST00000599044 TEPSINQ96N21 525 aa28.59■■■□□ 2.17
CCDC61-207ENST00000599044 LAMB1P07942 1786 aa28.58■■■□□ 2.17
CCDC61-207ENST00000599044 BCAR3O75815 825 aa28.58■■■□□ 2.17
CCDC61-207ENST00000599044 SLC5A1P13866 664 aa28.58■■■□□ 2.17
CCDC61-207ENST00000599044 PDE4DIPQ5VU43 2346 aa28.57■■■□□ 2.16
CCDC61-207ENST00000599044 CIAO1O76071 339 aa28.57■■■□□ 2.16
CCDC61-207ENST00000599044 CACNB3P54284 484 aa28.57■■■□□ 2.16
CCDC61-207ENST00000599044 TMEM39BQ9GZU3 492 aa28.57■■■□□ 2.16
CCDC61-207ENST00000599044 R3HDMLQ9H3Y0 253 aa28.57■■■□□ 2.16
CCDC61-207ENST00000599044 HDLBPQ00341 1268 aaKnown RBP28.56■■■□□ 2.16
CCDC61-207ENST00000599044 GJA5P36382 358 aa28.55■■■□□ 2.16
CCDC61-207ENST00000599044 TEKT1Q969V4 418 aa28.55■■■□□ 2.16
CCDC61-207ENST00000599044 WNK4Q96J92 1243 aa28.55■■■□□ 2.16
CCDC61-207ENST00000599044 CEP126Q9P2H0 1117 aa28.55■■■□□ 2.16
CCDC61-207ENST00000599044 FBXO3Q9UK99 471 aa28.55■■■□□ 2.16
CCDC61-207ENST00000599044 TNRC18O15417 2968 aaPredicted RBP28.54■■■□□ 2.16
CCDC61-207ENST00000599044 SREBF2Q12772 1141 aa28.54■■■□□ 2.16
CCDC61-207ENST00000599044 TNFAIP1Q13829 316 aa28.54■■■□□ 2.16
CCDC61-207ENST00000599044 ATP2B3Q16720 1220 aa28.54■■■□□ 2.16
CCDC61-207ENST00000599044 APOBEC3HQ6NTF7 200 aaKnown RBP28.54■■■□□ 2.16
CCDC61-207ENST00000599044 ZNF296Q8WUU4 475 aaPredicted RBP28.54■■■□□ 2.16
CCDC61-207ENST00000599044 TRIM27P14373 513 aa28.53■■■□□ 2.16
CCDC61-207ENST00000599044 MLLT1Q03111 559 aaPredicted RBP28.53■■■□□ 2.16
CCDC61-207ENST00000599044 ZDHHC15Q96MV8 337 aa28.53■■■□□ 2.16
CCDC61-207ENST00000599044 MRIQ9BWK5 157 aa28.53■■■□□ 2.16
CCDC61-207ENST00000599044 COPRSQ9NQ92 184 aa28.53■■■□□ 2.16
CCDC61-207ENST00000599044 IL15P40933 162 aaPredicted RBP28.52■■■□□ 2.16
CCDC61-207ENST00000599044 IREB2P48200 963 aaKnown RBP28.52■■■□□ 2.16
CCDC61-207ENST00000599044 FRAT1Q92837 279 aaPredicted RBP28.52■■■□□ 2.16
CCDC61-207ENST00000599044 ADORA1P30542 326 aa28.51■■■□□ 2.15
CCDC61-207ENST00000599044 SUGT1Q9Y2Z0 365 aa28.51■■■□□ 2.15
CCDC61-207ENST00000599044 UNCXA6NJT0 531 aa28.5■■■□□ 2.15
CCDC61-207ENST00000599044 GPR25O00155 361 aa28.5■■■□□ 2.15
CCDC61-207ENST00000599044 ZBTB48P10074 688 aaPredicted RBP28.5■■■□□ 2.15
CCDC61-207ENST00000599044 PHKA1P46020 1223 aa28.5■■■□□ 2.15
CCDC61-207ENST00000599044 CTU1Q7Z7A3 348 aaKnown RBP28.5■■■□□ 2.15
CCDC61-207ENST00000599044 ANKRD13AQ8IZ07 590 aa28.5■■■□□ 2.15
CCDC61-207ENST00000599044 WDR66Q8TBY9 1149 aa28.5■■■□□ 2.15
CCDC61-207ENST00000599044 CLUAP1Q96AJ1 413 aa28.5■■■□□ 2.15
CCDC61-207ENST00000599044 HDAC5Q9UQL6 1122 aa28.5■■■□□ 2.15
CCDC61-207ENST00000599044 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.5■■■□□ 2.15
CCDC61-207ENST00000599044 MANSC4A6NHS7 340 aaPredicted RBP28.49■■■□□ 2.15
CCDC61-207ENST00000599044 IGF2BP3O00425 579 aaKnown RBP eCLIP28.49■■■□□ 2.15
CCDC61-207ENST00000599044 GNAI3P08754 354 aa28.49■■■□□ 2.15
CCDC61-207ENST00000599044 ATF7IPQ6VMQ6 1270 aa28.49■■■□□ 2.15
CCDC61-207ENST00000599044 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.49■■■□□ 2.15
CCDC61-207ENST00000599044 IFNL1Q8IU54 200 aa28.49■■■□□ 2.15
CCDC61-207ENST00000599044 ELP3Q9H9T3 547 aa28.49■■■□□ 2.15
CCDC61-207ENST00000599044 SRGAP3O43295 1099 aa28.48■■■□□ 2.15
CCDC61-207ENST00000599044 TNNI2P48788 182 aa28.48■■■□□ 2.15
CCDC61-207ENST00000599044 HHIPL2Q6UWX4 724 aa28.48■■■□□ 2.15
CCDC61-207ENST00000599044 CNKSR2Q8WXI2 1034 aa28.48■■■□□ 2.15
CCDC61-207ENST00000599044 CFHR5Q9BXR6 569 aa28.48■■■□□ 2.15
CCDC61-207ENST00000599044 IPO8O15397 1037 aaKnown RBP28.47■■■□□ 2.15
CCDC61-207ENST00000599044 PRDX5P30044 214 aa28.47■■■□□ 2.15
CCDC61-207ENST00000599044 TIMM10P62072 90 aa28.47■■■□□ 2.15
CCDC61-207ENST00000599044 HNRNPUQ00839 825 aaKnown RBP eCLIP28.47■■■□□ 2.15
CCDC61-207ENST00000599044 DIXDC1Q155Q3 683 aa28.47■■■□□ 2.15
CCDC61-207ENST00000599044 MAST3O60307 1309 aa28.46■■■□□ 2.15
CCDC61-207ENST00000599044 INHBEP58166 350 aa28.46■■■□□ 2.15
CCDC61-207ENST00000599044 MTX1Q13505 466 aa28.46■■■□□ 2.15
CCDC61-207ENST00000599044 OPTNQ96CV9 577 aa28.46■■■□□ 2.15
CCDC61-207ENST00000599044 OTOFQ9HC10 1997 aa28.46■■■□□ 2.15
CCDC61-207ENST00000599044 TFCP2Q12800 502 aa28.45■■■□□ 2.14
CCDC61-207ENST00000599044 CCDC102BQ68D86 513 aa28.45■■■□□ 2.14
CCDC61-207ENST00000599044 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.45■■■□□ 2.14
CCDC61-207ENST00000599044 PTPN18Q99952 460 aa28.45■■■□□ 2.14
CCDC61-207ENST00000599044 DAGLAQ9Y4D2 1042 aa28.45■■■□□ 2.14
CCDC61-207ENST00000599044 VGLL4Q14135 290 aa28.44■■■□□ 2.14
CCDC61-207ENST00000599044 NOM1Q5C9Z4 860 aaKnown RBP28.44■■■□□ 2.14
CCDC61-207ENST00000599044 MAP3K9P80192 1104 aa28.43■■■□□ 2.14
CCDC61-207ENST00000599044 FAM83AQ86UY5 434 aa28.43■■■□□ 2.14
CCDC61-207ENST00000599044 GNL3LQ9NVN8 582 aaKnown RBP28.43■■■□□ 2.14
CCDC61-207ENST00000599044 PNMA6EA0A0J9YXQ4 647 aa28.42■■■□□ 2.14
CCDC61-207ENST00000599044 ALDH1A1P00352 501 aa28.42■■■□□ 2.14
CCDC61-207ENST00000599044 FKBP1CQ5VVH2 108 aa28.42■■■□□ 2.14
CCDC61-207ENST00000599044 CDC42EP5Q6NZY7 148 aa28.42■■■□□ 2.14
CCDC61-207ENST00000599044 TMEM57Q8N5G2 664 aa28.42■■■□□ 2.14
CCDC61-207ENST00000599044 TMOD2Q9NZR1 351 aa28.42■■■□□ 2.14
CCDC61-207ENST00000599044 DENND2AQ9ULE3 1009 aa28.42■■■□□ 2.14
CCDC61-207ENST00000599044 MYH13Q9UKX3 1938 aa28.41■■■□□ 2.14
CCDC61-207ENST00000599044 TESPA1A2RU30 521 aaPredicted RBP28.41■■■□□ 2.14
CCDC61-207ENST00000599044 FKTNO75072 461 aa28.41■■■□□ 2.14
CCDC61-207ENST00000599044 GNAI2P04899 355 aa28.41■■■□□ 2.14
CCDC61-207ENST00000599044 LDHBP07195 334 aaKnown RBP28.41■■■□□ 2.14
CCDC61-207ENST00000599044 MS4A4AQ96JQ5 239 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms