RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 C1orf141Q5JVX7 400 aa13.48□□□□□ -0.25
SMG9-207ENST00000598860 SMARCC1Q92922 1105 aaPredicted RBP13.48□□□□□ -0.25
SMG9-207ENST00000598860 INSM2Q96T92 566 aaPredicted RBP13.48□□□□□ -0.25
SMG9-207ENST00000598860 RAB6BQ9NRW1 208 aa13.48□□□□□ -0.25
SMG9-207ENST00000598860 CCNL1Q9UK58 526 aaPredicted RBP13.48□□□□□ -0.25
SMG9-207ENST00000598860 ITGB4P16144 1822 aa13.48□□□□□ -0.25
SMG9-207ENST00000598860 LRP5O75197 1615 aa13.47□□□□□ -0.25
SMG9-207ENST00000598860 A0A1W2PRU2 124 aa13.47□□□□□ -0.25
SMG9-207ENST00000598860 RIPK4P57078 832 aa13.47□□□□□ -0.25
SMG9-207ENST00000598860 MTHFSDQ2M296 383 aaKnown RBP13.47□□□□□ -0.25
SMG9-207ENST00000598860 AKAP4Q5JQC9 854 aa13.47□□□□□ -0.25
SMG9-207ENST00000598860 ZNF530Q6P9A1 599 aaPredicted RBP13.47□□□□□ -0.25
SMG9-207ENST00000598860 TPCN2Q8NHX9 752 aa13.47□□□□□ -0.25
SMG9-207ENST00000598860 PIGBQ92521 554 aa13.47□□□□□ -0.25
SMG9-207ENST00000598860 TMOD3Q9NYL9 352 aa13.47□□□□□ -0.25
SMG9-207ENST00000598860 RBM19Q9Y4C8 960 aaKnown RBP13.47□□□□□ -0.25
SMG9-207ENST00000598860 MEN1O00255 615 aa13.46□□□□□ -0.25
SMG9-207ENST00000598860 STAU1O95793 577 aaKnown RBP13.46□□□□□ -0.25
SMG9-207ENST00000598860 GNRH1P01148 92 aa13.46□□□□□ -0.25
SMG9-207ENST00000598860 RTF1Q92541 710 aaKnown RBP13.46□□□□□ -0.25
SMG9-207ENST00000598860 KIFC2Q96AC6 838 aa13.46□□□□□ -0.25
SMG9-207ENST00000598860 TRIM47Q96LD4 638 aa13.46□□□□□ -0.25
SMG9-207ENST00000598860 PDGFDQ9GZP0 370 aaPredicted RBP13.46□□□□□ -0.25
SMG9-207ENST00000598860 POLMQ9NP87 494 aaPredicted RBP13.46□□□□□ -0.25
SMG9-207ENST00000598860 MTMR7Q9Y216 660 aa13.46□□□□□ -0.25
SMG9-207ENST00000598860 GNAT3A8MTJ3 354 aa13.45□□□□□ -0.26
SMG9-207ENST00000598860 ERVV-2B6SEH9 535 aa13.45□□□□□ -0.26
SMG9-207ENST00000598860 CTSOP43234 321 aaPredicted RBP13.45□□□□□ -0.26
SMG9-207ENST00000598860 CALD1Q05682 793 aaKnown RBP13.45□□□□□ -0.26
SMG9-207ENST00000598860 DCAF5Q96JK2 942 aa13.45□□□□□ -0.26
SMG9-207ENST00000598860 SFI1A8K8P3 1242 aa13.44□□□□□ -0.26
SMG9-207ENST00000598860 ZBTB7AO95365 584 aa13.44□□□□□ -0.26
SMG9-207ENST00000598860 ARID4AP29374 1257 aaPredicted RBP13.44□□□□□ -0.26
SMG9-207ENST00000598860 ZNF827Q17R98 1081 aa13.44□□□□□ -0.26
SMG9-207ENST00000598860 ZNF787Q6DD87 383 aa13.44□□□□□ -0.26
SMG9-207ENST00000598860 YTHDC1Q96MU7 727 aaKnown RBP13.44□□□□□ -0.26
SMG9-207ENST00000598860 TFCP2L1Q9NZI6 479 aa13.44□□□□□ -0.26
SMG9-207ENST00000598860 PPP1R1BQ9UD71 204 aaPredicted RBP13.44□□□□□ -0.26
SMG9-207ENST00000598860 RRP7AQ9Y3A4 280 aaKnown RBP13.44□□□□□ -0.26
SMG9-207ENST00000598860 TOGARAM1Q9Y4F4 1720 aa13.44□□□□□ -0.26
SMG9-207ENST00000598860 PALLDQ8WX93 1383 aa13.44□□□□□ -0.26
SMG9-207ENST00000598860 MRC1P22897 1456 aa13.43□□□□□ -0.26
SMG9-207ENST00000598860 LY75O60449 1722 aa13.43□□□□□ -0.26
SMG9-207ENST00000598860 SNRPBP14678 240 aaKnown RBP13.43□□□□□ -0.26
SMG9-207ENST00000598860 WDR63Q8IWG1 891 aa13.43□□□□□ -0.26
SMG9-207ENST00000598860 ASAP1Q9ULH1 1129 aa13.43□□□□□ -0.26
SMG9-207ENST00000598860 KDM3BQ7LBC6 1761 aa13.43□□□□□ -0.26
SMG9-207ENST00000598860 ZNF521Q96K83 1311 aa13.42□□□□□ -0.26
SMG9-207ENST00000598860 TTLL8A6PVC2 850 aa13.42□□□□□ -0.26
SMG9-207ENST00000598860 CABP4P57796 275 aa13.42□□□□□ -0.26
SMG9-207ENST00000598860 NLRP3Q96P20 1036 aa13.42□□□□□ -0.26
SMG9-207ENST00000598860 ETNK1Q9HBU6 452 aa13.42□□□□□ -0.26
SMG9-207ENST00000598860 CEMIPQ8WUJ3 1361 aa13.42□□□□□ -0.26
SMG9-207ENST00000598860 IL16Q14005 1332 aa13.41□□□□□ -0.26
SMG9-207ENST00000598860 LOC102724428A0A0B4J2F2 783 aa13.41□□□□□ -0.26
SMG9-207ENST00000598860 FIGNL2A6NMB9 653 aa13.41□□□□□ -0.26
SMG9-207ENST00000598860 PRMT3O60678 531 aa13.41□□□□□ -0.26
SMG9-207ENST00000598860 IL2RAP01589 272 aa13.41□□□□□ -0.26
SMG9-207ENST00000598860 SIK1P57059 783 aa13.41□□□□□ -0.26
SMG9-207ENST00000598860 CLN3Q13286 438 aa13.41□□□□□ -0.26
SMG9-207ENST00000598860 SLC16A10Q8TF71 515 aa13.41□□□□□ -0.26
SMG9-207ENST00000598860 MTFR1LQ9H019 292 aa13.41□□□□□ -0.26
SMG9-207ENST00000598860 ATG3Q9NT62 314 aa13.41□□□□□ -0.26
SMG9-207ENST00000598860 PAPPAQ13219 1627 aa13.41□□□□□ -0.26
SMG9-207ENST00000598860 CACNA1FO60840 1977 aa13.41□□□□□ -0.26
SMG9-207ENST00000598860 CASZ1Q86V15 1759 aa13.4□□□□□ -0.26
SMG9-207ENST00000598860 KDM6AO15550 1401 aaPredicted RBP13.4□□□□□ -0.26
SMG9-207ENST00000598860 SOBPA7XYQ1 873 aa13.4□□□□□ -0.26
SMG9-207ENST00000598860 SCNN1DP51172 638 aa13.4□□□□□ -0.26
SMG9-207ENST00000598860 GDF10P55107 478 aa13.4□□□□□ -0.26
SMG9-207ENST00000598860 FOXD4L5Q5VV16 416 aaPredicted RBP13.4□□□□□ -0.26
SMG9-207ENST00000598860 C1orf216Q8TAB5 229 aa13.4□□□□□ -0.26
SMG9-207ENST00000598860 CNKSR1Q969H4 720 aa13.4□□□□□ -0.26
SMG9-207ENST00000598860 RNMTO43148 476 aaKnown RBP13.39□□□□□ -0.27
SMG9-207ENST00000598860 XAGE2Q96GT9 111 aa13.39□□□□□ -0.27
SMG9-207ENST00000598860 ESYT1Q9BSJ8 1104 aa13.39□□□□□ -0.27
SMG9-207ENST00000598860 PNPLA7Q6ZV29 1317 aa13.39□□□□□ -0.27
SMG9-207ENST00000598860 SRCAPQ6ZRS2 3230 aa13.38□□□□□ -0.27
SMG9-207ENST00000598860 UBR2Q8IWV8 1755 aa13.38□□□□□ -0.27
SMG9-207ENST00000598860 MAN1A2O60476 641 aa13.38□□□□□ -0.27
SMG9-207ENST00000598860 OCLNQ16625 522 aa13.38□□□□□ -0.27
SMG9-207ENST00000598860 PRIMPOLQ96LW4 560 aa13.38□□□□□ -0.27
SMG9-207ENST00000598860 BABAM1Q9NWV8 329 aa13.38□□□□□ -0.27
SMG9-207ENST00000598860 CXXC1Q9P0U4 656 aaPredicted RBP13.38□□□□□ -0.27
SMG9-207ENST00000598860 DNMT3LQ9UJW3 386 aa13.38□□□□□ -0.27
SMG9-207ENST00000598860 TMEM229AB2RXF0 380 aa13.37□□□□□ -0.27
SMG9-207ENST00000598860 E9PSI1 815 aa13.37□□□□□ -0.27
SMG9-207ENST00000598860 INHAP05111 366 aa13.37□□□□□ -0.27
SMG9-207ENST00000598860 SCNN1AP37088 669 aa13.37□□□□□ -0.27
SMG9-207ENST00000598860 RNF144AP50876 292 aaPredicted RBP13.37□□□□□ -0.27
SMG9-207ENST00000598860 GNAI1P63096 354 aa13.37□□□□□ -0.27
SMG9-207ENST00000598860 TEFQ10587 303 aa13.37□□□□□ -0.27
SMG9-207ENST00000598860 MCM10Q7L590 875 aa13.37□□□□□ -0.27
SMG9-207ENST00000598860 COL23A1Q86Y22 540 aaPredicted RBP13.37□□□□□ -0.27
SMG9-207ENST00000598860 FLAD1Q8NFF5 587 aa13.37□□□□□ -0.27
SMG9-207ENST00000598860 IL17REQ8NFR9 667 aa13.37□□□□□ -0.27
SMG9-207ENST00000598860 RNF217Q8TC41 542 aa13.37□□□□□ -0.27
SMG9-207ENST00000598860 MYH16Q9H6N6 1097 aa13.37□□□□□ -0.27
SMG9-207ENST00000598860 LGR6Q9HBX8 967 aa13.37□□□□□ -0.27
SMG9-207ENST00000598860 IFT57Q9NWB7 429 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms