RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 IFNL1Q8IU54 200 aa23.69■■□□□ 1.38
SNRPA-204ENST00000598452 HPS5Q9UPZ3 1129 aa23.69■■□□□ 1.38
SNRPA-204ENST00000598452 ZBTB48P10074 688 aaPredicted RBP23.68■■□□□ 1.38
SNRPA-204ENST00000598452 RFX5P48382 616 aaPredicted RBP23.68■■□□□ 1.38
SNRPA-204ENST00000598452 NOM1Q5C9Z4 860 aaKnown RBP23.68■■□□□ 1.38
SNRPA-204ENST00000598452 TEPSINQ96N21 525 aa23.68■■□□□ 1.38
SNRPA-204ENST00000598452 CFHR5Q9BXR6 569 aa23.68■■□□□ 1.38
SNRPA-204ENST00000598452 IGF2BP3O00425 579 aaKnown RBP eCLIP23.67■■□□□ 1.38
SNRPA-204ENST00000598452 FKTNO75072 461 aa23.67■■□□□ 1.38
SNRPA-204ENST00000598452 ANKRD13AQ8IZ07 590 aa23.67■■□□□ 1.38
SNRPA-204ENST00000598452 TRMT2AQ8IZ69 625 aaKnown RBP23.67■■□□□ 1.38
SNRPA-204ENST00000598452 TMEM39BQ9GZU3 492 aa23.67■■□□□ 1.38
SNRPA-204ENST00000598452 UNCXA6NJT0 531 aa23.66■■□□□ 1.38
SNRPA-204ENST00000598452 ALDH1A1P00352 501 aa23.66■■□□□ 1.38
SNRPA-204ENST00000598452 FGFR2P21802 821 aa23.66■■□□□ 1.38
SNRPA-204ENST00000598452 CACNB3P54284 484 aa23.66■■□□□ 1.38
SNRPA-204ENST00000598452 INHBEP58166 350 aa23.66■■□□□ 1.38
SNRPA-204ENST00000598452 PUM3Q15397 648 aaKnown RBP23.66■■□□□ 1.38
SNRPA-204ENST00000598452 TBC1D22AQ8WUA7 517 aa23.66■■□□□ 1.38
SNRPA-204ENST00000598452 EYA2O00167 538 aa23.65■■□□□ 1.38
SNRPA-204ENST00000598452 IFIT1P09914 478 aaKnown RBP23.65■■□□□ 1.38
SNRPA-204ENST00000598452 PKN2Q16513 984 aaKnown RBP23.65■■□□□ 1.38
SNRPA-204ENST00000598452 ELP3Q9H9T3 547 aa23.65■■□□□ 1.38
SNRPA-204ENST00000598452 HDLBPQ00341 1268 aaKnown RBP23.64■■□□□ 1.37
SNRPA-204ENST00000598452 TEKT1Q969V4 418 aa23.64■■□□□ 1.37
SNRPA-204ENST00000598452 NOB1Q9ULX3 412 aaKnown RBP23.64■■□□□ 1.37
SNRPA-204ENST00000598452 ARAP2Q8WZ64 1704 aa23.64■■□□□ 1.37
SNRPA-204ENST00000598452 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.63■■□□□ 1.37
SNRPA-204ENST00000598452 ATG9AQ7Z3C6 839 aa23.63■■□□□ 1.37
SNRPA-204ENST00000598452 CNKSR2Q8WXI2 1034 aa23.63■■□□□ 1.37
SNRPA-204ENST00000598452 UBTFL1P0CB47 393 aaPredicted RBP23.62■■□□□ 1.37
SNRPA-204ENST00000598452 TNNI2P48788 182 aa23.62■■□□□ 1.37
SNRPA-204ENST00000598452 OPTNQ96CV9 577 aa23.62■■□□□ 1.37
SNRPA-204ENST00000598452 PTPN18Q99952 460 aa23.62■■□□□ 1.37
SNRPA-204ENST00000598452 SIL1Q9H173 461 aa23.62■■□□□ 1.37
SNRPA-204ENST00000598452 SLC5A1P13866 664 aa23.61■■□□□ 1.37
SNRPA-204ENST00000598452 APOBEC3HQ6NTF7 200 aaKnown RBP23.61■■□□□ 1.37
SNRPA-204ENST00000598452 FBXO46Q6PJ61 603 aaPredicted RBP23.61■■□□□ 1.37
SNRPA-204ENST00000598452 LPIN2Q92539 896 aa23.61■■□□□ 1.37
SNRPA-204ENST00000598452 ZDHHC15Q96MV8 337 aa23.61■■□□□ 1.37
SNRPA-204ENST00000598452 KIF16BQ96L93 1317 aa23.6■■□□□ 1.37
SNRPA-204ENST00000598452 CT47B1P0C2W7 299 aaPredicted RBP23.6■■□□□ 1.37
SNRPA-204ENST00000598452 MAP3K9P80192 1104 aa23.59■■□□□ 1.37
SNRPA-204ENST00000598452 CRHR2Q13324 411 aa23.59■■□□□ 1.37
SNRPA-204ENST00000598452 VGLL4Q14135 290 aa23.59■■□□□ 1.37
SNRPA-204ENST00000598452 MRIQ9BWK5 157 aa23.59■■□□□ 1.37
SNRPA-204ENST00000598452 LRRFIP2Q9Y608 721 aaKnown RBP23.59■■□□□ 1.37
SNRPA-204ENST00000598452 TESPA1A2RU30 521 aaPredicted RBP23.58■■□□□ 1.37
SNRPA-204ENST00000598452 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.58■■□□□ 1.373e-7■□□□□ 8
SNRPA-204ENST00000598452 MS4A4AQ96JQ5 239 aa23.58■■□□□ 1.37
SNRPA-204ENST00000598452 SUGT1Q9Y2Z0 365 aa23.58■■□□□ 1.37
SNRPA-204ENST00000598452 TRIM17Q9Y577 477 aa23.58■■□□□ 1.37
SNRPA-204ENST00000598452 OTOFQ9HC10 1997 aa23.58■■□□□ 1.36
SNRPA-204ENST00000598452 OTUD7BQ6GQQ9 843 aa23.57■■□□□ 1.36
SNRPA-204ENST00000598452 API5Q9BZZ5 524 aaKnown RBP23.57■■□□□ 1.36
SNRPA-204ENST00000598452 TMOD2Q9NZR1 351 aa23.57■■□□□ 1.36
SNRPA-204ENST00000598452 PA2G4Q9UQ80 394 aaKnown RBP23.57■■□□□ 1.36
SNRPA-204ENST00000598452 HDAC5Q9UQL6 1122 aa23.57■■□□□ 1.36
SNRPA-204ENST00000598452 MYH13Q9UKX3 1938 aa23.57■■□□□ 1.36
SNRPA-204ENST00000598452 MAST3O60307 1309 aa23.57■■□□□ 1.36
SNRPA-204ENST00000598452 ATP2B3Q16720 1220 aa23.56■■□□□ 1.36
SNRPA-204ENST00000598452 HHIPL2Q6UWX4 724 aa23.56■■□□□ 1.36
SNRPA-204ENST00000598452 OTOP1Q7RTM1 612 aa23.56■■□□□ 1.36
SNRPA-204ENST00000598452 WDR66Q8TBY9 1149 aa23.56■■□□□ 1.36
SNRPA-204ENST00000598452 MEIS3Q99687 375 aa23.56■■□□□ 1.36
SNRPA-204ENST00000598452 CEP126Q9P2H0 1117 aa23.56■■□□□ 1.36
SNRPA-204ENST00000598452 CIAO1O76071 339 aa23.55■■□□□ 1.36
SNRPA-204ENST00000598452 RARSP54136 660 aaKnown RBP23.55■■□□□ 1.36
SNRPA-204ENST00000598452 FAM83AQ86UY5 434 aa23.55■■□□□ 1.36
SNRPA-204ENST00000598452 CD99L2Q8TCZ2 262 aa23.55■■□□□ 1.36
SNRPA-204ENST00000598452 BRI3BPQ8WY22 251 aa23.55■■□□□ 1.36
SNRPA-204ENST00000598452 OTUD5Q96G74 571 aa23.55■■□□□ 1.36
SNRPA-204ENST00000598452 CSADQ9Y600 493 aa23.55■■□□□ 1.36
SNRPA-204ENST00000598452 TNRC18O15417 2968 aaPredicted RBP23.55■■□□□ 1.36
SNRPA-204ENST00000598452 CCER2I3L3R5 266 aa23.54■■□□□ 1.36
SNRPA-204ENST00000598452 DIXDC1Q155Q3 683 aa23.54■■□□□ 1.36
SNRPA-204ENST00000598452 FBXO3Q9UK99 471 aa23.54■■□□□ 1.36
SNRPA-204ENST00000598452 CCL15-CCL14A0A0B4J2E2 113 aa23.53■■□□□ 1.36
SNRPA-204ENST00000598452 PRDX5P30044 214 aa23.53■■□□□ 1.36
SNRPA-204ENST00000598452 CCL15Q16663 113 aa23.53■■□□□ 1.36
SNRPA-204ENST00000598452 FKBP1CQ5VVH2 108 aa23.53■■□□□ 1.36
SNRPA-204ENST00000598452 ZKSCAN4Q969J2 545 aaPredicted RBP23.53■■□□□ 1.36
SNRPA-204ENST00000598452 WRNIP1Q96S55 665 aa23.53■■□□□ 1.36
SNRPA-204ENST00000598452 DAGLAQ9Y4D2 1042 aa23.53■■□□□ 1.36
SNRPA-204ENST00000598452 SNCAIPQ9Y6H5 919 aa23.53■■□□□ 1.36
SNRPA-204ENST00000598452 LAMB1P07942 1786 aa23.52■■□□□ 1.36
SNRPA-204ENST00000598452 ADORA1P30542 326 aa23.52■■□□□ 1.36
SNRPA-204ENST00000598452 PHKA1P46020 1223 aa23.52■■□□□ 1.36
SNRPA-204ENST00000598452 GTF2A2P52657 109 aa23.52■■□□□ 1.36
SNRPA-204ENST00000598452 CAP1Q01518 475 aa23.52■■□□□ 1.36
SNRPA-204ENST00000598452 MIGA2Q7L4E1 593 aa23.52■■□□□ 1.36
SNRPA-204ENST00000598452 ERO1AQ96HE7 468 aa23.52■■□□□ 1.36
SNRPA-204ENST00000598452 SPDYE5A6NIY4 337 aa23.51■■□□□ 1.35
SNRPA-204ENST00000598452 IL15P40933 162 aaPredicted RBP23.51■■□□□ 1.35
SNRPA-204ENST00000598452 SP3Q02447 781 aa23.51■■□□□ 1.35
SNRPA-204ENST00000598452 FAM43AQ8N2R8 423 aa23.51■■□□□ 1.35
SNRPA-204ENST00000598452 GNL3LQ9NVN8 582 aaKnown RBP23.51■■□□□ 1.35
SNRPA-204ENST00000598452 TCP10Q12799 353 aa23.5■■□□□ 1.35
SNRPA-204ENST00000598452 CDC42EP5Q6NZY7 148 aa23.5■■□□□ 1.35
SNRPA-204ENST00000598452 COPRSQ9NQ92 184 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms