RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 AKAP11Q9UKA4 1901 aa28.64■■■□□ 2.18
SSBP4-205ENST00000598159 PPP1R12BO60237 982 aaPredicted RBP28.63■■■□□ 2.17
SSBP4-205ENST00000598159 MAP3K11Q16584 847 aa28.63■■■□□ 2.17
SSBP4-205ENST00000598159 SPDYE2Q495Y8 402 aa28.63■■■□□ 2.17
SSBP4-205ENST00000598159 TDRD3Q9H7E2 651 aaKnown RBP28.63■■■□□ 2.17
SSBP4-205ENST00000598159 RNF186Q9NXI6 227 aa28.63■■■□□ 2.17
SSBP4-205ENST00000598159 PA2G4Q9UQ80 394 aaKnown RBP28.63■■■□□ 2.17
SSBP4-205ENST00000598159 RASA3Q14644 834 aa28.62■■■□□ 2.17
SSBP4-205ENST00000598159 GRIK5Q16478 980 aa28.62■■■□□ 2.17
SSBP4-205ENST00000598159 ATP2B3Q16720 1220 aa28.62■■■□□ 2.17
SSBP4-205ENST00000598159 ZKSCAN2Q63HK3 967 aa28.62■■■□□ 2.17
SSBP4-205ENST00000598159 AOX1Q06278 1338 aa28.62■■■□□ 2.17
SSBP4-205ENST00000598159 ARAP2Q8WZ64 1704 aa28.61■■■□□ 2.17
SSBP4-205ENST00000598159 UNCXA6NJT0 531 aa28.61■■■□□ 2.17
SSBP4-205ENST00000598159 TRPA1O75762 1119 aa28.61■■■□□ 2.17
SSBP4-205ENST00000598159 MTX1Q13505 466 aa28.61■■■□□ 2.17
SSBP4-205ENST00000598159 WDR66Q8TBY9 1149 aa28.61■■■□□ 2.17
SSBP4-205ENST00000598159 CLUAP1Q96AJ1 413 aa28.61■■■□□ 2.17
SSBP4-205ENST00000598159 GNL3LQ9NVN8 582 aaKnown RBP28.61■■■□□ 2.17
SSBP4-205ENST00000598159 SRGAP3O43295 1099 aa28.6■■■□□ 2.17
SSBP4-205ENST00000598159 TEKT1Q969V4 418 aa28.6■■■□□ 2.17
SSBP4-205ENST00000598159 CASP8AP2Q9UKL3 1982 aa28.6■■■□□ 2.17
SSBP4-205ENST00000598159 MAST3O60307 1309 aa28.6■■■□□ 2.17
SSBP4-205ENST00000598159 GNAI2P04899 355 aa28.59■■■□□ 2.17
SSBP4-205ENST00000598159 NBPF12Q5TAG4 269 aaPredicted RBP28.59■■■□□ 2.17
SSBP4-205ENST00000598159 TNNQ9UQP3 1299 aa28.59■■■□□ 2.17
SSBP4-205ENST00000598159 TNNI2P48788 182 aa28.58■■■□□ 2.17
SSBP4-205ENST00000598159 SLC10A4Q96EP9 437 aa28.58■■■□□ 2.17
SSBP4-205ENST00000598159 TM4SF4P48230 202 aa28.57■■■□□ 2.16
SSBP4-205ENST00000598159 HHIPL2Q6UWX4 724 aa28.57■■■□□ 2.16
SSBP4-205ENST00000598159 ZDHHC15Q96MV8 337 aa28.57■■■□□ 2.16
SSBP4-205ENST00000598159 ZBTB22O15209 634 aa28.56■■■□□ 2.16
SSBP4-205ENST00000598159 ZBED9Q6R2W3 1325 aa28.56■■■□□ 2.16
SSBP4-205ENST00000598159 FZD1Q9UP38 647 aa28.56■■■□□ 2.16
SSBP4-205ENST00000598159 TCP10L2B9ZVM9 353 aa28.55■■■□□ 2.16
SSBP4-205ENST00000598159 SEMA3EO15041 775 aa28.55■■■□□ 2.16
SSBP4-205ENST00000598159 USP2O75604 605 aaPredicted RBP28.55■■■□□ 2.16
SSBP4-205ENST00000598159 IREB2P48200 963 aaKnown RBP28.55■■■□□ 2.16
SSBP4-205ENST00000598159 TMEM57Q8N5G2 664 aa28.55■■■□□ 2.16
SSBP4-205ENST00000598159 DENND2AQ9ULE3 1009 aa28.55■■■□□ 2.16
SSBP4-205ENST00000598159 AKAP2Q9Y2D5 859 aa28.55■■■□□ 2.16
SSBP4-205ENST00000598159 MYH13Q9UKX3 1938 aa28.54■■■□□ 2.16
SSBP4-205ENST00000598159 SPRYD7Q5W111 196 aa28.54■■■□□ 2.16
SSBP4-205ENST00000598159 ABHD8Q96I13 439 aa28.54■■■□□ 2.16
SSBP4-205ENST00000598159 TIMM10P62072 90 aa28.53■■■□□ 2.16
SSBP4-205ENST00000598159 SREBF2Q12772 1141 aa28.53■■■□□ 2.16
SSBP4-205ENST00000598159 TMOD2Q9NZR1 351 aa28.53■■■□□ 2.16
SSBP4-205ENST00000598159 SSC5DA1L4H1 1573 aa28.53■■■□□ 2.16
SSBP4-205ENST00000598159 MKRN3Q13064 507 aaKnown RBP28.52■■■□□ 2.16
SSBP4-205ENST00000598159 APOBEC3HQ6NTF7 200 aaKnown RBP28.52■■■□□ 2.16
SSBP4-205ENST00000598159 TEPSINQ96N21 525 aa28.52■■■□□ 2.16
SSBP4-205ENST00000598159 PHKA1P46020 1223 aa28.51■■■□□ 2.15
SSBP4-205ENST00000598159 INHBEP58166 350 aa28.51■■■□□ 2.15
SSBP4-205ENST00000598159 FKBP1CQ5VVH2 108 aa28.51■■■□□ 2.15
SSBP4-205ENST00000598159 CCDC102BQ68D86 513 aa28.51■■■□□ 2.15
SSBP4-205ENST00000598159 ANKRD13AQ8IZ07 590 aa28.51■■■□□ 2.15
SSBP4-205ENST00000598159 SALL1Q9NSC2 1324 aa28.5■■■□□ 2.15
SSBP4-205ENST00000598159 ZBTB48P10074 688 aaPredicted RBP28.5■■■□□ 2.15
SSBP4-205ENST00000598159 TFCP2Q12800 502 aa28.5■■■□□ 2.15
SSBP4-205ENST00000598159 FTSJ3Q8IY81 847 aaKnown RBP28.5■■■□□ 2.15
SSBP4-205ENST00000598159 TMEM39BQ9GZU3 492 aa28.5■■■□□ 2.15
SSBP4-205ENST00000598159 LDHBP07195 334 aaKnown RBP28.49■■■□□ 2.15
SSBP4-205ENST00000598159 G3BP1Q13283 466 aaKnown RBP eCLIP28.49■■■□□ 2.15
SSBP4-205ENST00000598159 FAM83AQ86UY5 434 aa28.49■■■□□ 2.15
SSBP4-205ENST00000598159 CLMNQ96JQ2 1002 aa28.49■■■□□ 2.15
SSBP4-205ENST00000598159 PNMA6EA0A0J9YXQ4 647 aa28.48■■■□□ 2.15
SSBP4-205ENST00000598159 A0A1B0GUL7 405 aa28.48■■■□□ 2.15
SSBP4-205ENST00000598159 MANSC4A6NHS7 340 aaPredicted RBP28.48■■■□□ 2.15
SSBP4-205ENST00000598159 ADORA1P30542 326 aa28.48■■■□□ 2.15
SSBP4-205ENST00000598159 ZGPATQ8N5A5 531 aaKnown RBP28.48■■■□□ 2.15
SSBP4-205ENST00000598159 WNK4Q96J92 1243 aa28.48■■■□□ 2.15
SSBP4-205ENST00000598159 MCOLN1Q9GZU1 580 aa28.48■■■□□ 2.15
SSBP4-205ENST00000598159 DGKZQ13574 1117 aa28.47■■■□□ 2.15
SSBP4-205ENST00000598159 XAGE2Q96GT9 111 aa28.47■■■□□ 2.15
SSBP4-205ENST00000598159 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.47■■■□□ 2.15
SSBP4-205ENST00000598159 PRDX5P30044 214 aa28.46■■■□□ 2.15
SSBP4-205ENST00000598159 CACNB3P54284 484 aa28.46■■■□□ 2.15
SSBP4-205ENST00000598159 ATP8B2P98198 1209 aa28.46■■■□□ 2.15
SSBP4-205ENST00000598159 MVPQ14764 893 aaKnown RBP28.46■■■□□ 2.15
SSBP4-205ENST00000598159 HOOK2Q96ED9 719 aa28.46■■■□□ 2.15
SSBP4-205ENST00000598159 TBC1D8O95759 1140 aa28.45■■■□□ 2.14
SSBP4-205ENST00000598159 ALDH1A1P00352 501 aa28.45■■■□□ 2.14
SSBP4-205ENST00000598159 NEUROD6Q96NK8 337 aa28.45■■■□□ 2.14
SSBP4-205ENST00000598159 PDS5AQ29RF7 1337 aaKnown RBP28.44■■■□□ 2.14
SSBP4-205ENST00000598159 ZBTB7BO15156 539 aaPredicted RBP28.44■■■□□ 2.14
SSBP4-205ENST00000598159 CDAN1Q8IWY9 1227 aa28.44■■■□□ 2.14
SSBP4-205ENST00000598159 CFHR5Q9BXR6 569 aa28.44■■■□□ 2.14
SSBP4-205ENST00000598159 DAGLAQ9Y4D2 1042 aa28.44■■■□□ 2.14
SSBP4-205ENST00000598159 MAP3K9P80192 1104 aa28.43■■■□□ 2.14
SSBP4-205ENST00000598159 POLA2Q14181 598 aa28.43■■■□□ 2.14
SSBP4-205ENST00000598159 NOM1Q5C9Z4 860 aaKnown RBP28.43■■■□□ 2.14
SSBP4-205ENST00000598159 ITPRIPQ8IWB1 547 aa28.43■■■□□ 2.14
SSBP4-205ENST00000598159 RASGRF1Q13972 1273 aa28.42■■■□□ 2.14
SSBP4-205ENST00000598159 DIXDC1Q155Q3 683 aa28.42■■■□□ 2.14
SSBP4-205ENST00000598159 SPTY2D1Q68D10 685 aaPredicted RBP28.42■■■□□ 2.14
SSBP4-205ENST00000598159 CDC42EP5Q6NZY7 148 aa28.42■■■□□ 2.14
SSBP4-205ENST00000598159 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.42■■■□□ 2.14
SSBP4-205ENST00000598159 RLBP1P12271 317 aa28.41■■■□□ 2.14
SSBP4-205ENST00000598159 GORABQ5T7V8 394 aa28.41■■■□□ 2.14
SSBP4-205ENST00000598159 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms