RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 NBPF7P0C2Y1 421 aaPredicted RBP21.38■■□□□ 1.01
PNKP-210ENST00000597965 CRKP46108 304 aa21.38■■□□□ 1.01
PNKP-210ENST00000597965 RABL6Q3YEC7 729 aaPredicted RBP21.38■■□□□ 1.01
PNKP-210ENST00000597965 METTL24Q5JXM2 366 aa21.38■■□□□ 1.01
PNKP-210ENST00000597965 OTOP1Q7RTM1 612 aa21.38■■□□□ 1.01
PNKP-210ENST00000597965 TDRD3Q9H7E2 651 aaKnown RBP21.38■■□□□ 1.01
PNKP-210ENST00000597965 MAST3O60307 1309 aa21.37■■□□□ 1.01
PNKP-210ENST00000597965 CRHR2Q13324 411 aa21.37■■□□□ 1.01
PNKP-210ENST00000597965 FBXO33Q7Z6M2 555 aa21.37■■□□□ 1.01
PNKP-210ENST00000597965 TEKT1Q969V4 418 aa21.37■■□□□ 1.01
PNKP-210ENST00000597965 OPTNQ96CV9 577 aa21.37■■□□□ 1.01
PNKP-210ENST00000597965 MRIQ9BWK5 157 aa21.37■■□□□ 1.01
PNKP-210ENST00000597965 BICC1Q9H694 974 aaKnown RBP21.37■■□□□ 1.01
PNKP-210ENST00000597965 TMOD2Q9NZR1 351 aa21.37■■□□□ 1.01
PNKP-210ENST00000597965 SUGT1Q9Y2Z0 365 aa21.37■■□□□ 1.01
PNKP-210ENST00000597965 CSADQ9Y600 493 aa21.37■■□□□ 1.01
PNKP-210ENST00000597965 PDE8BO95263 885 aa21.36■■□□□ 1.01
PNKP-210ENST00000597965 GTF2A2P52657 109 aa21.36■■□□□ 1.01
PNKP-210ENST00000597965 KAZALD1Q96I82 304 aa21.36■■□□□ 1.01
PNKP-210ENST00000597965 PUS3Q9BZE2 481 aaKnown RBP21.36■■□□□ 1.01
PNKP-210ENST00000597965 ELP3Q9H9T3 547 aa21.36■■□□□ 1.01
PNKP-210ENST00000597965 KIF16BQ96L93 1317 aa21.35■■□□□ 1.01
PNKP-210ENST00000597965 TCP10L2B9ZVM9 353 aa21.35■■□□□ 1.01
PNKP-210ENST00000597965 MAP3K9P80192 1104 aa21.35■■□□□ 1.01
PNKP-210ENST00000597965 SP3Q02447 781 aa21.35■■□□□ 1.01
PNKP-210ENST00000597965 EFCC1Q9HA90 598 aa21.35■■□□□ 1.01
PNKP-210ENST00000597965 TEPSINQ96N21 525 aa21.34■■□□□ 1.01
PNKP-210ENST00000597965 PTPN22Q9Y2R2 807 aa21.34■■□□□ 1.01
PNKP-210ENST00000597965 AOX1Q06278 1338 aa21.33■■□□□ 1.01
PNKP-210ENST00000597965 IFIT1P09914 478 aaKnown RBP21.33■■□□□ 1.01
PNKP-210ENST00000597965 GJA5P36382 358 aa21.33■■□□□ 1.01
PNKP-210ENST00000597965 CHAF1AQ13111 956 aaPredicted RBP21.33■■□□□ 1.01
PNKP-210ENST00000597965 FKBP1CQ5VVH2 108 aa21.33■■□□□ 1.01
PNKP-210ENST00000597965 GCC1Q96CN9 775 aa21.33■■□□□ 1.01
PNKP-210ENST00000597965 ZFYVE28Q9HCC9 887 aa21.33■■□□□ 1.01
PNKP-210ENST00000597965 PUM3Q15397 648 aaKnown RBP21.32■■□□□ 1
PNKP-210ENST00000597965 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.32■■□□□ 1
PNKP-210ENST00000597965 FAM83AQ86UY5 434 aa21.32■■□□□ 1
PNKP-210ENST00000597965 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.32■■□□□ 13e-6■■■■■ 38.3
PNKP-210ENST00000597965 MS4A4AQ96JQ5 239 aa21.32■■□□□ 1
PNKP-210ENST00000597965 ZDHHC15Q96MV8 337 aa21.32■■□□□ 1
PNKP-210ENST00000597965 TMEM39BQ9GZU3 492 aa21.32■■□□□ 1
PNKP-210ENST00000597965 OTOFQ9HC10 1997 aa21.32■■□□□ 1
PNKP-210ENST00000597965 ZNF521Q96K83 1311 aa21.31■■□□□ 1
PNKP-210ENST00000597965 E9PSI1 815 aa21.31■■□□□ 1
PNKP-210ENST00000597965 VGLL4Q14135 290 aa21.31■■□□□ 1
PNKP-210ENST00000597965 LRRC24Q50LG9 513 aa21.31■■□□□ 1
PNKP-210ENST00000597965 MRPL50Q8N5N7 158 aaKnown RBP21.31■■□□□ 1
PNKP-210ENST00000597965 CD99L2Q8TCZ2 262 aa21.31■■□□□ 1
PNKP-210ENST00000597965 PTPN18Q99952 460 aa21.31■■□□□ 1
PNKP-210ENST00000597965 ZCCHC17Q9NP64 241 aaKnown RBP21.31■■□□□ 1
PNKP-210ENST00000597965 CCL15-CCL14A0A0B4J2E2 113 aa21.3■■□□□ 1
PNKP-210ENST00000597965 CCL15Q16663 113 aa21.3■■□□□ 1
PNKP-210ENST00000597965 DCAF15Q66K64 600 aa21.3■■□□□ 1
PNKP-210ENST00000597965 NBPF11Q86T75 865 aa21.3■■□□□ 1
PNKP-210ENST00000597965 ANKRD44Q8N8A2 993 aa21.3■■□□□ 1
PNKP-210ENST00000597965 VGLL2Q8N8G2 317 aa21.3■■□□□ 1
PNKP-210ENST00000597965 IQSEC3Q9UPP2 1182 aaPredicted RBP21.3■■□□□ 1
PNKP-210ENST00000597965 CETPP11597 493 aa21.29■■□□□ 1
PNKP-210ENST00000597965 TAF1CQ15572 869 aaPredicted RBP21.29■■□□□ 1
PNKP-210ENST00000597965 HHIPL2Q6UWX4 724 aa21.29■■□□□ 1
PNKP-210ENST00000597965 ERO1BQ86YB8 467 aa21.29■■□□□ 1
PNKP-210ENST00000597965 WDR66Q8TBY9 1149 aa21.29■■□□□ 1
PNKP-210ENST00000597965 ARMC5Q96C12 935 aa21.29■■□□□ 1
PNKP-210ENST00000597965 SPDYE5A6NIY4 337 aa21.28■■□□□ 1
PNKP-210ENST00000597965 SLC5A1P13866 664 aa21.28■■□□□ 1
PNKP-210ENST00000597965 BRI3BPQ8WY22 251 aa21.28■■□□□ 1
PNKP-210ENST00000597965 OTUD5Q96G74 571 aa21.28■■□□□ 1
PNKP-210ENST00000597965 HDAC5Q9UQL6 1122 aa21.28■■□□□ 1
PNKP-210ENST00000597965 RPAP1Q9BWH6 1393 aaPredicted RBP21.27■■□□□ 1
PNKP-210ENST00000597965 BCAMP50895 628 aa21.27■■□□□ 1
PNKP-210ENST00000597965 KIF22Q14807 665 aa21.27■■□□□ 1
PNKP-210ENST00000597965 LPIN2Q92539 896 aa21.27■■□□□ 1
PNKP-210ENST00000597965 WRNIP1Q96S55 665 aa21.27■■□□□ 1
PNKP-210ENST00000597965 TMEM106CQ9BVX2 250 aa21.27■■□□□ 1
PNKP-210ENST00000597965 USP44Q9H0E7 712 aa21.27■■□□□ 1
PNKP-210ENST00000597965 FBXO3Q9UK99 471 aa21.27■■□□□ 1
PNKP-210ENST00000597965 RBBP6Q7Z6E9 1792 aaKnown RBP21.26■□□□□ 0.99
PNKP-210ENST00000597965 GNRH1P01148 92 aa21.26■□□□□ 0.99
PNKP-210ENST00000597965 SNAPC2Q13487 334 aa21.26■□□□□ 0.99
PNKP-210ENST00000597965 ALDH1L2Q3SY69 923 aa21.26■□□□□ 0.99
PNKP-210ENST00000597965 CDAN1Q8IWY9 1227 aa21.26■□□□□ 0.99
PNKP-210ENST00000597965 EYA2O00167 538 aa21.25■□□□□ 0.99
PNKP-210ENST00000597965 FGFR2P21802 821 aa21.25■□□□□ 0.99
PNKP-210ENST00000597965 GRIK5Q16478 980 aa21.25■□□□□ 0.99
PNKP-210ENST00000597965 APOBEC3HQ6NTF7 200 aaKnown RBP21.25■□□□□ 0.99
PNKP-210ENST00000597965 SSH1Q8WYL5 1049 aa21.25■□□□□ 0.99
PNKP-210ENST00000597965 GNL3LQ9NVN8 582 aaKnown RBP21.25■□□□□ 0.99
PNKP-210ENST00000597965 HTTP42858 3142 aa21.24■□□□□ 0.99
PNKP-210ENST00000597965 SLC9C1Q4G0N8 1177 aa21.24■□□□□ 0.99
PNKP-210ENST00000597965 KLHDC4Q8TBB5 520 aa21.24■□□□□ 0.99
PNKP-210ENST00000597965 ZNF341Q9BYN7 854 aa21.24■□□□□ 0.99
PNKP-210ENST00000597965 MYH13Q9UKX3 1938 aa21.23■□□□□ 0.99
PNKP-210ENST00000597965 CENPFP49454 3210 aa21.23■□□□□ 0.99
PNKP-210ENST00000597965 TLR2O60603 784 aa21.23■□□□□ 0.99
PNKP-210ENST00000597965 CACNB3P54284 484 aa21.23■□□□□ 0.99
PNKP-210ENST00000597965 PPIL2Q13356 520 aa21.23■□□□□ 0.99
PNKP-210ENST00000597965 CNKSR2Q8WXI2 1034 aa21.23■□□□□ 0.99
PNKP-210ENST00000597965 SNCAIPQ9Y6H5 919 aa21.23■□□□□ 0.99
PNKP-210ENST00000597965 KIAA0100Q14667 2235 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms