RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 FPGT-TNNI3KV9GXZ4 949 aa20.62■□□□□ 0.89
SSBP4-204ENST00000597724 PDS5AQ29RF7 1337 aaKnown RBP20.61■□□□□ 0.89
SSBP4-204ENST00000597724 SALL1Q9NSC2 1324 aa20.61■□□□□ 0.89
SSBP4-204ENST00000597724 MYO1BO43795 1136 aa20.61■□□□□ 0.89
SSBP4-204ENST00000597724 HMMRO75330 724 aa20.61■□□□□ 0.89
SSBP4-204ENST00000597724 ECM29Q5VYK3 1845 aa20.61■□□□□ 0.89
SSBP4-204ENST00000597724 MAST3O60307 1309 aa20.6■□□□□ 0.89
SSBP4-204ENST00000597724 VEGFBP49765 207 aa20.6■□□□□ 0.89
SSBP4-204ENST00000597724 HSP90AB4PQ58FF6 505 aa20.6■□□□□ 0.89
SSBP4-204ENST00000597724 TEKT1Q969V4 418 aa20.6■□□□□ 0.89
SSBP4-204ENST00000597724 GBA2Q9HCG7 927 aaPredicted RBP20.6■□□□□ 0.89
SSBP4-204ENST00000597724 CLRN2A0PK11 232 aa20.59■□□□□ 0.89
SSBP4-204ENST00000597724 ARID4AP29374 1257 aaPredicted RBP20.59■□□□□ 0.89
SSBP4-204ENST00000597724 PRDX5P30044 214 aa20.59■□□□□ 0.89
SSBP4-204ENST00000597724 PRAMEF18Q5VWM3 479 aa20.59■□□□□ 0.89
SSBP4-204ENST00000597724 HHIPL2Q6UWX4 724 aa20.59■□□□□ 0.89
SSBP4-204ENST00000597724 ERC1Q8IUD2 1116 aa20.59■□□□□ 0.89
SSBP4-204ENST00000597724 C2orf69Q8N8R5 385 aa20.59■□□□□ 0.89
SSBP4-204ENST00000597724 HHIPL1Q96JK4 782 aa20.59■□□□□ 0.89
SSBP4-204ENST00000597724 LDHBP07195 334 aaKnown RBP20.58■□□□□ 0.89
SSBP4-204ENST00000597724 DBNDD2Q9BQY9 259 aa20.58■□□□□ 0.89
SSBP4-204ENST00000597724 TDRD3Q9H7E2 651 aaKnown RBP20.58■□□□□ 0.89
SSBP4-204ENST00000597724 HMG20BQ9P0W2 317 aa20.58■□□□□ 0.89
SSBP4-204ENST00000597724 ZNF70Q9UC06 446 aaPredicted RBP20.58■□□□□ 0.89
SSBP4-204ENST00000597724 UQCRFS1P1P0C7P4 283 aa20.57■□□□□ 0.88
SSBP4-204ENST00000597724 SPDYE2Q495Y8 402 aa20.57■□□□□ 0.88
SSBP4-204ENST00000597724 ZGPATQ8N5A5 531 aaKnown RBP20.57■□□□□ 0.88
SSBP4-204ENST00000597724 EAF2Q96CJ1 260 aaPredicted RBP20.57■□□□□ 0.88
SSBP4-204ENST00000597724 ZDHHC15Q96MV8 337 aa20.57■□□□□ 0.88
SSBP4-204ENST00000597724 DEFB129Q9H1M3 183 aa20.57■□□□□ 0.88
SSBP4-204ENST00000597724 VEZTQ9HBM0 779 aa20.57■□□□□ 0.88
SSBP4-204ENST00000597724 HUNKP57058 714 aa20.56■□□□□ 0.88
SSBP4-204ENST00000597724 CCDC158Q5M9N0 1113 aa20.56■□□□□ 0.88
SSBP4-204ENST00000597724 CYP4F22Q6NT55 531 aa20.56■□□□□ 0.88
SSBP4-204ENST00000597724 APOBEC3HQ6NTF7 200 aaKnown RBP20.56■□□□□ 0.88
SSBP4-204ENST00000597724 SPATA5Q8NB90 893 aa20.56■□□□□ 0.88
SSBP4-204ENST00000597724 RHPN1Q8TCX5 695 aa20.56■□□□□ 0.88
SSBP4-204ENST00000597724 CCDC8Q9H0W5 538 aaPredicted RBP20.56■□□□□ 0.88
SSBP4-204ENST00000597724 DBNLQ9UJU6 430 aaKnown RBP20.56■□□□□ 0.88
SSBP4-204ENST00000597724 PPP2R3BQ9Y5P8 575 aa20.56■□□□□ 0.88
SSBP4-204ENST00000597724 WDR33Q9C0J8 1336 aaKnown RBP20.55■□□□□ 0.88
SSBP4-204ENST00000597724 MCAMP43121 646 aa20.55■□□□□ 0.88
SSBP4-204ENST00000597724 FKBP1BP68106 108 aa20.55■□□□□ 0.88
SSBP4-204ENST00000597724 PI16Q6UXB8 463 aa20.55■□□□□ 0.88
SSBP4-204ENST00000597724 PAXIP1Q6ZW49 1069 aaPredicted RBP20.55■□□□□ 0.88
SSBP4-204ENST00000597724 CAPNS2Q96L46 248 aa20.55■□□□□ 0.88
SSBP4-204ENST00000597724 TLR7Q9NYK1 1049 aaKnown RBP20.55■□□□□ 0.88
SSBP4-204ENST00000597724 ABCF2Q9UG63 623 aa20.55■□□□□ 0.88
SSBP4-204ENST00000597724 RAB11FIP3O75154 756 aa20.54■□□□□ 0.88
SSBP4-204ENST00000597724 ECE1P42892 770 aa20.54■□□□□ 0.88
SSBP4-204ENST00000597724 TNFAIP1Q13829 316 aa20.54■□□□□ 0.88
SSBP4-204ENST00000597724 DIXDC1Q155Q3 683 aa20.54■□□□□ 0.88
SSBP4-204ENST00000597724 TTC39AQ5SRH9 613 aa20.54■□□□□ 0.88
SSBP4-204ENST00000597724 SPTY2D1Q68D10 685 aaPredicted RBP20.54■□□□□ 0.88
SSBP4-204ENST00000597724 KIF1BPQ96EK5 621 aa20.54■□□□□ 0.88
SSBP4-204ENST00000597724 ZNF512BQ96KM6 892 aaPredicted RBP20.54■□□□□ 0.88
SSBP4-204ENST00000597724 NF2P35240 595 aa20.53■□□□□ 0.88
SSBP4-204ENST00000597724 RASA3Q14644 834 aa20.53■□□□□ 0.88
SSBP4-204ENST00000597724 IL1RAPL2Q9NP60 686 aa20.53■□□□□ 0.88
SSBP4-204ENST00000597724 DAGLAQ9Y4D2 1042 aa20.53■□□□□ 0.88
SSBP4-204ENST00000597724 APBB1O00213 710 aa20.52■□□□□ 0.88
SSBP4-204ENST00000597724 AACSQ86V21 672 aa20.52■□□□□ 0.88
SSBP4-204ENST00000597724 PAPPA2Q9BXP8 1791 aa20.51■□□□□ 0.87
SSBP4-204ENST00000597724 AKAP11Q9UKA4 1901 aa20.51■□□□□ 0.87
SSBP4-204ENST00000597724 TCP10L2B9ZVM9 353 aa20.51■□□□□ 0.87
SSBP4-204ENST00000597724 GRM1Q13255 1194 aa20.51■□□□□ 0.87
SSBP4-204ENST00000597724 RGMBQ6NW40 437 aa20.51■□□□□ 0.87
SSBP4-204ENST00000597724 TBC1D9Q6ZT07 1266 aa20.51■□□□□ 0.87
SSBP4-204ENST00000597724 MOB2Q70IA6 237 aa20.51■□□□□ 0.87
SSBP4-204ENST00000597724 CLASRPQ8N2M8 674 aaKnown RBP20.51■□□□□ 0.87
SSBP4-204ENST00000597724 CRBNQ96SW2 442 aa20.51■□□□□ 0.87
SSBP4-204ENST00000597724 SNRKQ9NRH2 765 aa20.51■□□□□ 0.87
SSBP4-204ENST00000597724 TNNI2P48788 182 aa20.5■□□□□ 0.87
SSBP4-204ENST00000597724 CACNB3P54284 484 aa20.5■□□□□ 0.87
SSBP4-204ENST00000597724 SUPT20HL1Q3ZLR7 823 aa20.5■□□□□ 0.87
SSBP4-204ENST00000597724 FKBP1CQ5VVH2 108 aa20.5■□□□□ 0.87
SSBP4-204ENST00000597724 ERICH6Q7L0X2 663 aa20.5■□□□□ 0.87
SSBP4-204ENST00000597724 DZIP1Q86YF9 867 aaKnown RBP20.5■□□□□ 0.87
SSBP4-204ENST00000597724 FAM163AQ96GL9 167 aaPredicted RBP20.5■□□□□ 0.87
SSBP4-204ENST00000597724 MYH2Q9UKX2 1941 aa20.49■□□□□ 0.87
SSBP4-204ENST00000597724 AOC2O75106 756 aa20.49■□□□□ 0.87
SSBP4-204ENST00000597724 MECOMQ03112 1051 aa20.49■□□□□ 0.87
SSBP4-204ENST00000597724 TTLL12Q14166 644 aaPredicted RBP20.49■□□□□ 0.87
SSBP4-204ENST00000597724 NBPF12Q5TAG4 269 aaPredicted RBP20.49■□□□□ 0.87
SSBP4-204ENST00000597724 CDC42EP5Q6NZY7 148 aa20.49■□□□□ 0.87
SSBP4-204ENST00000597724 SLF2Q8IX21 1173 aa20.49■□□□□ 0.87
SSBP4-204ENST00000597724 ZNF384Q8TF68 577 aa20.49■□□□□ 0.87
SSBP4-204ENST00000597724 TMOD2Q9NZR1 351 aa20.49■□□□□ 0.87
SSBP4-204ENST00000597724 PCDHB15Q9Y5E8 787 aa20.49■□□□□ 0.87
SSBP4-204ENST00000597724 GAKO14976 1311 aa20.49■□□□□ 0.87
SSBP4-204ENST00000597724 SSC5DA1L4H1 1573 aa20.48■□□□□ 0.87
SSBP4-204ENST00000597724 UBE2Q2LH0YL09 131 aa20.48■□□□□ 0.87
SSBP4-204ENST00000597724 CYP2E1P05181 493 aaPredicted RBP20.48■□□□□ 0.87
SSBP4-204ENST00000597724 MAP2K2P36507 400 aa20.48■□□□□ 0.87
SSBP4-204ENST00000597724 ZNF157P51786 506 aaPredicted RBP20.48■□□□□ 0.87
SSBP4-204ENST00000597724 FAM83AQ86UY5 434 aa20.48■□□□□ 0.87
SSBP4-204ENST00000597724 CCDC102AQ96A19 550 aa20.48■□□□□ 0.87
SSBP4-204ENST00000597724 NSUN4Q96CB9 384 aaKnown RBP20.48■□□□□ 0.87
SSBP4-204ENST00000597724 TEPSINQ96N21 525 aa20.48■□□□□ 0.87
SSBP4-204ENST00000597724 TMEM39BQ9GZU3 492 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms