RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 PCDHAC2Q9Y5I4 1007 aa22.23■■□□□ 1.15
IRF3-216ENST00000597180 APBB1O00213 710 aa22.22■■□□□ 1.15
IRF3-216ENST00000597180 TRAF5O00463 557 aa22.22■■□□□ 1.15
IRF3-216ENST00000597180 MCAMP43121 646 aa22.22■■□□□ 1.15
IRF3-216ENST00000597180 TTC39AQ5SRH9 613 aa22.22■■□□□ 1.15
IRF3-216ENST00000597180 KRT26Q7Z3Y9 468 aa22.22■■□□□ 1.15
IRF3-216ENST00000597180 SPATA5Q8NB90 893 aa22.22■■□□□ 1.15
IRF3-216ENST00000597180 EXOC6Q8TAG9 804 aa22.22■■□□□ 1.15
IRF3-216ENST00000597180 MAST2Q6P0Q8 1798 aa22.21■■□□□ 1.15
IRF3-216ENST00000597180 CRKP46108 304 aa22.21■■□□□ 1.15
IRF3-216ENST00000597180 USP48Q86UV5 1035 aa22.21■■□□□ 1.15
IRF3-216ENST00000597180 PRMT6Q96LA8 375 aaPredicted RBP22.21■■□□□ 1.15
IRF3-216ENST00000597180 LRRCC1Q9C099 1032 aa22.21■■□□□ 1.15
IRF3-216ENST00000597180 LDHBP07195 334 aaKnown RBP22.2■■□□□ 1.14
IRF3-216ENST00000597180 PRDX5P30044 214 aa22.2■■□□□ 1.14
IRF3-216ENST00000597180 RBM5P52756 815 aaKnown RBP eCLIP22.2■■□□□ 1.14
IRF3-216ENST00000597180 FMR1Q06787 632 aaKnown RBP eCLIP22.2■■□□□ 1.14
IRF3-216ENST00000597180 PI16Q6UXB8 463 aa22.2■■□□□ 1.14
IRF3-216ENST00000597180 SULF1Q8IWU6 871 aa22.2■■□□□ 1.14
IRF3-216ENST00000597180 TEKT1Q969V4 418 aa22.2■■□□□ 1.14
IRF3-216ENST00000597180 DOCK2Q92608 1830 aa22.2■■□□□ 1.14
IRF3-216ENST00000597180 ADM5C9JUS6 153 aa22.19■■□□□ 1.14
IRF3-216ENST00000597180 HHIPL2Q6UWX4 724 aa22.19■■□□□ 1.14
IRF3-216ENST00000597180 CREBZFQ9NS37 354 aa22.19■■□□□ 1.14
IRF3-216ENST00000597180 AOX1Q06278 1338 aa22.18■■□□□ 1.14
IRF3-216ENST00000597180 TMEM88BA6NKF7 163 aa22.18■■□□□ 1.14
IRF3-216ENST00000597180 MYO1BO43795 1136 aa22.18■■□□□ 1.14
IRF3-216ENST00000597180 HDAC1Q13547 482 aaPredicted RBP22.18■■□□□ 1.14
IRF3-216ENST00000597180 SPTY2D1Q68D10 685 aaPredicted RBP22.18■■□□□ 1.14
IRF3-216ENST00000597180 APOBEC3FQ8IUX4 373 aaKnown RBP22.18■■□□□ 1.14
IRF3-216ENST00000597180 ZDHHC15Q96MV8 337 aa22.18■■□□□ 1.14
IRF3-216ENST00000597180 IFIT2P09913 472 aaKnown RBP22.17■■□□□ 1.14
IRF3-216ENST00000597180 SPDYE2Q495Y8 402 aa22.16■■□□□ 1.14
IRF3-216ENST00000597180 CST9Q5W186 159 aa22.16■■□□□ 1.14
IRF3-216ENST00000597180 DLK2Q6UY11 383 aa22.16■■□□□ 1.14
IRF3-216ENST00000597180 ABCF2Q9UG63 623 aa22.16■■□□□ 1.14
IRF3-216ENST00000597180 SMARCA5O60264 1052 aaPredicted RBP22.15■■□□□ 1.14
IRF3-216ENST00000597180 HTRA3P83110 453 aa22.15■■□□□ 1.14
IRF3-216ENST00000597180 DIXDC1Q155Q3 683 aa22.15■■□□□ 1.14
IRF3-216ENST00000597180 APOBEC3HQ6NTF7 200 aaKnown RBP22.15■■□□□ 1.14
IRF3-216ENST00000597180 ERICH6Q7L0X2 663 aa22.15■■□□□ 1.14
IRF3-216ENST00000597180 SNRKQ9NRH2 765 aa22.15■■□□□ 1.14
IRF3-216ENST00000597180 CLRN2A0PK11 232 aa22.14■■□□□ 1.13
IRF3-216ENST00000597180 CELF2O95319 508 aaKnown RBP22.14■■□□□ 1.13
IRF3-216ENST00000597180 TBC1D9Q6ZT07 1266 aa22.14■■□□□ 1.13
IRF3-216ENST00000597180 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.14■■□□□ 1.13
IRF3-216ENST00000597180 CDCA5Q96FF9 252 aa22.14■■□□□ 1.13
IRF3-216ENST00000597180 TDRD3Q9H7E2 651 aaKnown RBP22.14■■□□□ 1.13
IRF3-216ENST00000597180 ZNF70Q9UC06 446 aaPredicted RBP22.14■■□□□ 1.13
IRF3-216ENST00000597180 SCAF8Q9UPN6 1271 aaKnown RBP22.14■■□□□ 1.13
IRF3-216ENST00000597180 DAGLAQ9Y4D2 1042 aa22.14■■□□□ 1.13
IRF3-216ENST00000597180 GAKO14976 1311 aa22.13■■□□□ 1.13
IRF3-216ENST00000597180 CYP2E1P05181 493 aaPredicted RBP22.13■■□□□ 1.13
IRF3-216ENST00000597180 ZAP70P43403 619 aa22.13■■□□□ 1.13
IRF3-216ENST00000597180 DZIP1Q86YF9 867 aaKnown RBP22.13■■□□□ 1.13
IRF3-216ENST00000597180 IGSF3O75054 1194 aa22.12■■□□□ 1.13
IRF3-216ENST00000597180 IRX6P78412 446 aaPredicted RBP22.12■■□□□ 1.13
IRF3-216ENST00000597180 MECOMQ03112 1051 aa22.12■■□□□ 1.13
IRF3-216ENST00000597180 SLF2Q8IX21 1173 aa22.12■■□□□ 1.13
IRF3-216ENST00000597180 ZNF384Q8TF68 577 aa22.12■■□□□ 1.13
IRF3-216ENST00000597180 GCC1Q96CN9 775 aa22.12■■□□□ 1.13
IRF3-216ENST00000597180 FAM163AQ96GL9 167 aaPredicted RBP22.12■■□□□ 1.13
IRF3-216ENST00000597180 VEZTQ9HBM0 779 aa22.12■■□□□ 1.13
IRF3-216ENST00000597180 PAPPA2Q9BXP8 1791 aa22.12■■□□□ 1.13
IRF3-216ENST00000597180 DNAJC5GQ8N7S2 189 aa22.11■■□□□ 1.13
IRF3-216ENST00000597180 NSUN4Q96CB9 384 aaKnown RBP22.11■■□□□ 1.13
IRF3-216ENST00000597180 DEFB129Q9H1M3 183 aa22.11■■□□□ 1.13
IRF3-216ENST00000597180 ZNF408Q9H9D4 720 aa22.11■■□□□ 1.13
IRF3-216ENST00000597180 LRP2BPQ9P2M1 347 aa22.11■■□□□ 1.13
IRF3-216ENST00000597180 PPP2R3BQ9Y5P8 575 aa22.11■■□□□ 1.13
IRF3-216ENST00000597180 MYH7P12883 1935 aa22.11■■□□□ 1.13
IRF3-216ENST00000597180 TNFAIP1Q13829 316 aa22.1■■□□□ 1.13
IRF3-216ENST00000597180 BCL11AQ9H165 835 aa22.1■■□□□ 1.13
IRF3-216ENST00000597180 RWDD1Q9H446 243 aaPredicted RBP22.1■■□□□ 1.13
IRF3-216ENST00000597180 RAI14Q9P0K7 980 aa22.1■■□□□ 1.13
IRF3-216ENST00000597180 MROH7-TTC4A0A0A0MT08 1334 aa22.09■■□□□ 1.13
IRF3-216ENST00000597180 ATP5JP18859 108 aa22.09■■□□□ 1.13
IRF3-216ENST00000597180 GSTO1P78417 241 aa22.09■■□□□ 1.13
IRF3-216ENST00000597180 FKBP1CQ5VVH2 108 aa22.09■■□□□ 1.13
IRF3-216ENST00000597180 PIH1D3Q9NQM4 214 aaKnown RBP22.09■■□□□ 1.13
IRF3-216ENST00000597180 TLL2Q9Y6L7 1015 aa22.09■■□□□ 1.13
IRF3-216ENST00000597180 CDK5RAP2Q96SN8 1893 aa22.09■■□□□ 1.13
IRF3-216ENST00000597180 RASSF10A6NK89 507 aa22.08■■□□□ 1.13
IRF3-216ENST00000597180 PRAMEF18Q5VWM3 479 aa22.08■■□□□ 1.13
IRF3-216ENST00000597180 SMC5Q8IY18 1101 aa22.08■■□□□ 1.13
IRF3-216ENST00000597180 GBA2Q9HCG7 927 aaPredicted RBP22.08■■□□□ 1.13
IRF3-216ENST00000597180 TMOD2Q9NZR1 351 aa22.08■■□□□ 1.13
IRF3-216ENST00000597180 NDUFB9Q9Y6M9 179 aa22.08■■□□□ 1.13
IRF3-216ENST00000597180 CNTNAP1P78357 1384 aa22.08■■□□□ 1.12
IRF3-216ENST00000597180 LDHCP07864 332 aa22.07■■□□□ 1.12
IRF3-216ENST00000597180 RASA3Q14644 834 aa22.07■■□□□ 1.12
IRF3-216ENST00000597180 CDC42EP5Q6NZY7 148 aa22.07■■□□□ 1.12
IRF3-216ENST00000597180 SAPCD2Q86UD0 394 aa22.07■■□□□ 1.12
IRF3-216ENST00000597180 ANTXR1Q9H6X2 564 aa22.07■■□□□ 1.12
IRF3-216ENST00000597180 ABT1Q9ULW3 272 aaKnown RBP22.07■■□□□ 1.12
IRF3-216ENST00000597180 FOCADQ5VW36 1801 aa22.07■■□□□ 1.12
IRF3-216ENST00000597180 AK9Q5TCS8 1911 aa22.06■■□□□ 1.12
IRF3-216ENST00000597180 GPR75-ASB3A0A0A6YYF3 556 aa22.06■■□□□ 1.12
IRF3-216ENST00000597180 TCP10L2B9ZVM9 353 aa22.06■■□□□ 1.12
IRF3-216ENST00000597180 IGHDP01880 384 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms