RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 CACNB3P54284 484 aa21.29■■□□□ 1
CCDC9-202ENST00000595659 MAP3K11Q16584 847 aa21.29■■□□□ 1
CCDC9-202ENST00000595659 ZNF296Q8WUU4 475 aaPredicted RBP21.29■■□□□ 1
CCDC9-202ENST00000595659 LRRFIP2Q9Y608 721 aaKnown RBP21.29■■□□□ 1
CCDC9-202ENST00000595659 SLC5A1P13866 664 aa21.28■■□□□ 1
CCDC9-202ENST00000595659 CTU1Q7Z7A3 348 aaKnown RBP21.28■■□□□ 1
CCDC9-202ENST00000595659 TBC1D22AQ8WUA7 517 aa21.28■■□□□ 1
CCDC9-202ENST00000595659 WNK4Q96J92 1243 aa21.28■■□□□ 1
CCDC9-202ENST00000595659 MEIS3Q99687 375 aa21.28■■□□□ 1
CCDC9-202ENST00000595659 TMEM39BQ9GZU3 492 aa21.28■■□□□ 1
CCDC9-202ENST00000595659 PA2G4Q9UQ80 394 aaKnown RBP21.28■■□□□ 1
CCDC9-202ENST00000595659 IREB2P48200 963 aaKnown RBP21.27■■□□□ 1
CCDC9-202ENST00000595659 TNFAIP1Q13829 316 aa21.27■■□□□ 1
CCDC9-202ENST00000595659 LPIN2Q92539 896 aa21.27■■□□□ 1
CCDC9-202ENST00000595659 GPR25O00155 361 aa21.26■□□□□ 0.99
CCDC9-202ENST00000595659 GJA5P36382 358 aa21.26■□□□□ 0.99
CCDC9-202ENST00000595659 TEKT1Q969V4 418 aa21.26■□□□□ 0.99
CCDC9-202ENST00000595659 TEPSINQ96N21 525 aa21.26■□□□□ 0.99
CCDC9-202ENST00000595659 MANSC4A6NHS7 340 aaPredicted RBP21.25■□□□□ 0.99
CCDC9-202ENST00000595659 ELP3Q9H9T3 547 aa21.25■□□□□ 0.99
CCDC9-202ENST00000595659 CEP126Q9P2H0 1117 aa21.25■□□□□ 0.99
CCDC9-202ENST00000595659 TNNI2P48788 182 aa21.24■□□□□ 0.99
CCDC9-202ENST00000595659 HDLBPQ00341 1268 aaKnown RBP21.24■□□□□ 0.99
CCDC9-202ENST00000595659 ATP2B3Q16720 1220 aa21.24■□□□□ 0.99
CCDC9-202ENST00000595659 IFNL1Q8IU54 200 aa21.24■□□□□ 0.99
CCDC9-202ENST00000595659 ANKRD13AQ8IZ07 590 aa21.24■□□□□ 0.99
CCDC9-202ENST00000595659 TNNQ9UQP3 1299 aa21.24■□□□□ 0.99
CCDC9-202ENST00000595659 ZBTB48P10074 688 aaPredicted RBP21.23■□□□□ 0.99
CCDC9-202ENST00000595659 MLLT1Q03111 559 aaPredicted RBP21.23■□□□□ 0.99
CCDC9-202ENST00000595659 APOBEC3HQ6NTF7 200 aaKnown RBP21.23■□□□□ 0.99
CCDC9-202ENST00000595659 CNKSR2Q8WXI2 1034 aa21.23■□□□□ 0.99
CCDC9-202ENST00000595659 KIF16BQ96L93 1317 aa21.23■□□□□ 0.99
CCDC9-202ENST00000595659 IGF2BP3O00425 579 aaKnown RBP eCLIP21.22■□□□□ 0.99
CCDC9-202ENST00000595659 CIAO1O76071 339 aa21.22■□□□□ 0.99
CCDC9-202ENST00000595659 RGS19P49795 217 aa21.22■□□□□ 0.99
CCDC9-202ENST00000595659 SOX10P56693 466 aa21.22■□□□□ 0.99
CCDC9-202ENST00000595659 ZDHHC15Q96MV8 337 aa21.22■□□□□ 0.99
CCDC9-202ENST00000595659 UNCXA6NJT0 531 aa21.21■□□□□ 0.99
CCDC9-202ENST00000595659 FKTNO75072 461 aa21.21■□□□□ 0.99
CCDC9-202ENST00000595659 BCAR3O75815 825 aa21.21■□□□□ 0.99
CCDC9-202ENST00000595659 INHBEP58166 350 aa21.21■□□□□ 0.99
CCDC9-202ENST00000595659 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.21■□□□□ 0.99
CCDC9-202ENST00000595659 WDR66Q8TBY9 1149 aa21.21■□□□□ 0.99
CCDC9-202ENST00000595659 FRAT1Q92837 279 aaPredicted RBP21.21■□□□□ 0.99
CCDC9-202ENST00000595659 OPTNQ96CV9 577 aa21.21■□□□□ 0.99
CCDC9-202ENST00000595659 ALDH1A1P00352 501 aa21.2■□□□□ 0.98
CCDC9-202ENST00000595659 ADORA1P30542 326 aa21.2■□□□□ 0.98
CCDC9-202ENST00000595659 IL15P40933 162 aaPredicted RBP21.2■□□□□ 0.98
CCDC9-202ENST00000595659 PHKA1P46020 1223 aa21.2■□□□□ 0.98
CCDC9-202ENST00000595659 INTS3Q68E01 1043 aaKnown RBP21.2■□□□□ 0.98
CCDC9-202ENST00000595659 ARHGAP45Q92619 1136 aa21.2■□□□□ 0.98
CCDC9-202ENST00000595659 MRIQ9BWK5 157 aa21.2■□□□□ 0.98
CCDC9-202ENST00000595659 TMOD2Q9NZR1 351 aa21.2■□□□□ 0.98
CCDC9-202ENST00000595659 FBXO3Q9UK99 471 aa21.2■□□□□ 0.98
CCDC9-202ENST00000595659 HPS5Q9UPZ3 1129 aa21.2■□□□□ 0.98
CCDC9-202ENST00000595659 HDAC5Q9UQL6 1122 aa21.2■□□□□ 0.98
CCDC9-202ENST00000595659 SUGT1Q9Y2Z0 365 aa21.2■□□□□ 0.98
CCDC9-202ENST00000595659 AKAP11Q9UKA4 1901 aa21.19■□□□□ 0.98
CCDC9-202ENST00000595659 MAP3K9P80192 1104 aa21.19■□□□□ 0.98
CCDC9-202ENST00000595659 VGLL4Q14135 290 aa21.19■□□□□ 0.98
CCDC9-202ENST00000595659 DIXDC1Q155Q3 683 aa21.19■□□□□ 0.98
CCDC9-202ENST00000595659 CLUAP1Q96AJ1 413 aa21.19■□□□□ 0.98
CCDC9-202ENST00000595659 COPRSQ9NQ92 184 aa21.19■□□□□ 0.98
CCDC9-202ENST00000595659 MAST3O60307 1309 aa21.19■□□□□ 0.98
CCDC9-202ENST00000595659 SRGAP3O43295 1099 aa21.18■□□□□ 0.98
CCDC9-202ENST00000595659 TRIM27P14373 513 aa21.18■□□□□ 0.98
CCDC9-202ENST00000595659 PRDX5P30044 214 aa21.18■□□□□ 0.98
CCDC9-202ENST00000595659 TIMM10P62072 90 aa21.18■□□□□ 0.98
CCDC9-202ENST00000595659 NOM1Q5C9Z4 860 aaKnown RBP21.18■□□□□ 0.98
CCDC9-202ENST00000595659 HHIPL2Q6UWX4 724 aa21.18■□□□□ 0.98
CCDC9-202ENST00000595659 PTPN18Q99952 460 aa21.18■□□□□ 0.98
CCDC9-202ENST00000595659 CFHR5Q9BXR6 569 aa21.18■□□□□ 0.98
CCDC9-202ENST00000595659 GNL3LQ9NVN8 582 aaKnown RBP21.18■□□□□ 0.98
CCDC9-202ENST00000595659 GNAI3P08754 354 aa21.17■□□□□ 0.98
CCDC9-202ENST00000595659 MIER1Q8N108 512 aa21.17■□□□□ 0.98
CCDC9-202ENST00000595659 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.17■□□□□ 0.98
CCDC9-202ENST00000595659 DAGLAQ9Y4D2 1042 aa21.17■□□□□ 0.98
CCDC9-202ENST00000595659 IPO8O15397 1037 aaKnown RBP21.16■□□□□ 0.98
CCDC9-202ENST00000595659 TCP10Q12799 353 aa21.16■□□□□ 0.98
CCDC9-202ENST00000595659 PKN2Q16513 984 aaKnown RBP21.16■□□□□ 0.98
CCDC9-202ENST00000595659 MIGA2Q7L4E1 593 aa21.16■□□□□ 0.98
CCDC9-202ENST00000595659 ZKSCAN4Q969J2 545 aaPredicted RBP21.16■□□□□ 0.98
CCDC9-202ENST00000595659 OTUD5Q96G74 571 aa21.16■□□□□ 0.98
CCDC9-202ENST00000595659 CSADQ9Y600 493 aa21.16■□□□□ 0.98
CCDC9-202ENST00000595659 LDHBP07195 334 aaKnown RBP21.15■□□□□ 0.98
CCDC9-202ENST00000595659 TFCP2Q12800 502 aa21.15■□□□□ 0.98
CCDC9-202ENST00000595659 CRHR2Q13324 411 aa21.15■□□□□ 0.98
CCDC9-202ENST00000595659 CCDC102BQ68D86 513 aa21.15■□□□□ 0.98
CCDC9-202ENST00000595659 OTUD7BQ6GQQ9 843 aa21.15■□□□□ 0.98
CCDC9-202ENST00000595659 CDC42EP5Q6NZY7 148 aa21.15■□□□□ 0.98
CCDC9-202ENST00000595659 ATF7IPQ6VMQ6 1270 aa21.15■□□□□ 0.98
CCDC9-202ENST00000595659 FAM83AQ86UY5 434 aa21.15■□□□□ 0.98
CCDC9-202ENST00000595659 MS4A4AQ96JQ5 239 aa21.15■□□□□ 0.98
CCDC9-202ENST00000595659 DENND2AQ9ULE3 1009 aa21.15■□□□□ 0.98
CCDC9-202ENST00000595659 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.15■□□□□ 0.98
CCDC9-202ENST00000595659 ECM29Q5VYK3 1845 aa21.14■□□□□ 0.97
CCDC9-202ENST00000595659 TESPA1A2RU30 521 aaPredicted RBP21.14■□□□□ 0.97
CCDC9-202ENST00000595659 HNRNPUQ00839 825 aaKnown RBP eCLIP21.14■□□□□ 0.97
CCDC9-202ENST00000595659 FKBP1CQ5VVH2 108 aa21.14■□□□□ 0.97
CCDC9-202ENST00000595659 BRI3BPQ8WY22 251 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms