RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 DEFB129Q9H1M3 183 aa19.53■□□□□ 0.72
ZNF550-207ENST00000595560 WBP1LQ9NX94 342 aa19.53■□□□□ 0.72
ZNF550-207ENST00000595560 CLRN2A0PK11 232 aa19.52■□□□□ 0.72
ZNF550-207ENST00000595560 TIMM10P62072 90 aa19.52■□□□□ 0.72
ZNF550-207ENST00000595560 SPDYE2Q495Y8 402 aa19.52■□□□□ 0.72
ZNF550-207ENST00000595560 DENND2AQ9ULE3 1009 aa19.52■□□□□ 0.72
ZNF550-207ENST00000595560 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.52■□□□□ 0.72
ZNF550-207ENST00000595560 SALL1Q9NSC2 1324 aa19.51■□□□□ 0.71
ZNF550-207ENST00000595560 NOGQ13253 232 aa19.51■□□□□ 0.71
ZNF550-207ENST00000595560 CEP85Q6P2H3 762 aa19.51■□□□□ 0.71
ZNF550-207ENST00000595560 TEKT1Q969V4 418 aa19.51■□□□□ 0.71
ZNF550-207ENST00000595560 AIDAQ96BJ3 306 aa19.51■□□□□ 0.71
ZNF550-207ENST00000595560 XAGE2Q96GT9 111 aa19.51■□□□□ 0.71
ZNF550-207ENST00000595560 VEZTQ9HBM0 779 aa19.51■□□□□ 0.71
ZNF550-207ENST00000595560 DDX19BQ9UMR2 479 aa19.51■□□□□ 0.71
ZNF550-207ENST00000595560 PDS5AQ29RF7 1337 aaKnown RBP19.51■□□□□ 0.71
ZNF550-207ENST00000595560 FAM155AB1AL88 458 aaPredicted RBP19.5■□□□□ 0.71
ZNF550-207ENST00000595560 AOC2O75106 756 aa19.5■□□□□ 0.71
ZNF550-207ENST00000595560 TNFAIP1Q13829 316 aa19.5■□□□□ 0.71
ZNF550-207ENST00000595560 CCDC102AQ96A19 550 aa19.5■□□□□ 0.71
ZNF550-207ENST00000595560 ZDHHC15Q96MV8 337 aa19.5■□□□□ 0.71
ZNF550-207ENST00000595560 ZNF70Q9UC06 446 aaPredicted RBP19.5■□□□□ 0.71
ZNF550-207ENST00000595560 NOP58Q9Y2X3 529 aaKnown RBP19.5■□□□□ 0.71
ZNF550-207ENST00000595560 SSC5DA1L4H1 1573 aa19.49■□□□□ 0.71
ZNF550-207ENST00000595560 FOXN1O15353 648 aa19.49■□□□□ 0.71
ZNF550-207ENST00000595560 ZNF157P51786 506 aaPredicted RBP19.49■□□□□ 0.71
ZNF550-207ENST00000595560 RASGRF1Q13972 1273 aa19.49■□□□□ 0.71
ZNF550-207ENST00000595560 HHIPL2Q6UWX4 724 aa19.49■□□□□ 0.71
ZNF550-207ENST00000595560 TDRD3Q9H7E2 651 aaKnown RBP19.49■□□□□ 0.71
ZNF550-207ENST00000595560 GPR108Q9NPR9 543 aa19.49■□□□□ 0.71
ZNF550-207ENST00000595560 COG6Q9Y2V7 657 aa19.49■□□□□ 0.71
ZNF550-207ENST00000595560 SURF6O75683 361 aaKnown RBP19.48■□□□□ 0.71
ZNF550-207ENST00000595560 SLC10A3P09131 477 aa19.48■□□□□ 0.71
ZNF550-207ENST00000595560 PRDX5P30044 214 aa19.48■□□□□ 0.71
ZNF550-207ENST00000595560 OS9Q13438 667 aaPredicted RBP19.48■□□□□ 0.71
ZNF550-207ENST00000595560 MOB2Q70IA6 237 aa19.48■□□□□ 0.71
ZNF550-207ENST00000595560 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.48■□□□□ 0.71
ZNF550-207ENST00000595560 NEUROD6Q96NK8 337 aa19.48■□□□□ 0.71
ZNF550-207ENST00000595560 MYH2Q9UKX2 1941 aa19.48■□□□□ 0.71
ZNF550-207ENST00000595560 LDHBP07195 334 aaKnown RBP19.47■□□□□ 0.71
ZNF550-207ENST00000595560 TTLL12Q14166 644 aaPredicted RBP19.47■□□□□ 0.71
ZNF550-207ENST00000595560 PDE3AQ14432 1141 aa19.47■□□□□ 0.71
ZNF550-207ENST00000595560 RASA3Q14644 834 aa19.47■□□□□ 0.71
ZNF550-207ENST00000595560 ZGPATQ8N5A5 531 aaKnown RBP19.47■□□□□ 0.71
ZNF550-207ENST00000595560 CHMP4BQ9H444 224 aaKnown RBP19.47■□□□□ 0.71
ZNF550-207ENST00000595560 ZBTB40Q9NUA8 1239 aa19.47■□□□□ 0.71
ZNF550-207ENST00000595560 UBE2Q2LH0YL09 131 aa19.46■□□□□ 0.71
ZNF550-207ENST00000595560 CTCFP49711 727 aaPredicted RBP19.46■□□□□ 0.71
ZNF550-207ENST00000595560 SUPT20HL1Q3ZLR7 823 aa19.46■□□□□ 0.71
ZNF550-207ENST00000595560 TNNI3KQ59H18 835 aa19.46■□□□□ 0.71
ZNF550-207ENST00000595560 APOBEC3HQ6NTF7 200 aaKnown RBP19.46■□□□□ 0.71
ZNF550-207ENST00000595560 ARMC9Q7Z3E5 817 aa19.46■□□□□ 0.71
ZNF550-207ENST00000595560 RASAL3Q86YV0 1011 aa19.46■□□□□ 0.71
ZNF550-207ENST00000595560 BEGAINQ9BUH8 593 aa19.46■□□□□ 0.71
ZNF550-207ENST00000595560 FPGT-TNNI3KV9GXZ4 949 aa19.46■□□□□ 0.71
ZNF550-207ENST00000595560 ARID4AP29374 1257 aaPredicted RBP19.45■□□□□ 0.7
ZNF550-207ENST00000595560 GORABQ5T7V8 394 aa19.45■□□□□ 0.7
ZNF550-207ENST00000595560 ZIC5Q96T25 663 aa19.45■□□□□ 0.7
ZNF550-207ENST00000595560 AKAP11Q9UKA4 1901 aa19.45■□□□□ 0.7
ZNF550-207ENST00000595560 OTOFQ9HC10 1997 aa19.44■□□□□ 0.7
ZNF550-207ENST00000595560 TNNI2P48788 182 aa19.44■□□□□ 0.7
ZNF550-207ENST00000595560 DIXDC1Q155Q3 683 aa19.44■□□□□ 0.7
ZNF550-207ENST00000595560 MAP3K11Q16584 847 aa19.44■□□□□ 0.7
ZNF550-207ENST00000595560 NBPF12Q5TAG4 269 aaPredicted RBP19.44■□□□□ 0.7
ZNF550-207ENST00000595560 FKBP1CQ5VVH2 108 aa19.44■□□□□ 0.7
ZNF550-207ENST00000595560 TMOD2Q9NZR1 351 aa19.44■□□□□ 0.7
ZNF550-207ENST00000595560 DAGLAQ9Y4D2 1042 aa19.44■□□□□ 0.7
ZNF550-207ENST00000595560 LAMB1P07942 1786 aa19.44■□□□□ 0.7
ZNF550-207ENST00000595560 TCP10L2B9ZVM9 353 aa19.43■□□□□ 0.7
ZNF550-207ENST00000595560 CA12O43570 354 aa19.43■□□□□ 0.7
ZNF550-207ENST00000595560 PPP1R12BO60237 982 aaPredicted RBP19.43■□□□□ 0.7
ZNF550-207ENST00000595560 PRKG1Q13976 671 aa19.43■□□□□ 0.7
ZNF550-207ENST00000595560 LDLRAD1Q5T700 205 aa19.43■□□□□ 0.7
ZNF550-207ENST00000595560 COL13A1Q5TAT6 717 aaPredicted RBP19.43■□□□□ 0.7
ZNF550-207ENST00000595560 C20orf194Q5TEA3 1177 aa19.43■□□□□ 0.7
ZNF550-207ENST00000595560 RPAP2Q8IXW5 612 aaPredicted RBP19.43■□□□□ 0.7
ZNF550-207ENST00000595560 TEPSINQ96N21 525 aa19.43■□□□□ 0.7
ZNF550-207ENST00000595560 HMG20BQ9P0W2 317 aa19.43■□□□□ 0.7
ZNF550-207ENST00000595560 ANGEL1Q9UNK9 670 aaKnown RBP19.43■□□□□ 0.7
ZNF550-207ENST00000595560 UQCRFS1P1P0C7P4 283 aa19.42■□□□□ 0.7
ZNF550-207ENST00000595560 HSPA8P11142 646 aaKnown RBP19.42■□□□□ 0.7
ZNF550-207ENST00000595560 SPTY2D1Q68D10 685 aaPredicted RBP19.42■□□□□ 0.7
ZNF550-207ENST00000595560 FAM83AQ86UY5 434 aa19.42■□□□□ 0.7
ZNF550-207ENST00000595560 ERC1Q8IUD2 1116 aa19.42■□□□□ 0.7
ZNF550-207ENST00000595560 SPATA5Q8NB90 893 aa19.42■□□□□ 0.7
ZNF550-207ENST00000595560 TMEM39BQ9GZU3 492 aa19.42■□□□□ 0.7
ZNF550-207ENST00000595560 PRDM10Q9NQV6 1147 aa19.42■□□□□ 0.7
ZNF550-207ENST00000595560 ABCF2Q9UG63 623 aa19.42■□□□□ 0.7
ZNF550-207ENST00000595560 RPAP1Q9BWH6 1393 aaPredicted RBP19.42■□□□□ 0.7
ZNF550-207ENST00000595560 UNCXA6NJT0 531 aa19.41■□□□□ 0.7
ZNF550-207ENST00000595560 HMMRO75330 724 aa19.41■□□□□ 0.7
ZNF550-207ENST00000595560 MCAMP43121 646 aa19.41■□□□□ 0.7
ZNF550-207ENST00000595560 CACNB3P54284 484 aa19.41■□□□□ 0.7
ZNF550-207ENST00000595560 KIF23Q02241 960 aaPredicted RBP19.41■□□□□ 0.7
ZNF550-207ENST00000595560 HSP90AB4PQ58FF6 505 aa19.41■□□□□ 0.7
ZNF550-207ENST00000595560 DZIP1Q86YF9 867 aaKnown RBP19.41■□□□□ 0.7
ZNF550-207ENST00000595560 DBNDD2Q9BQY9 259 aa19.41■□□□□ 0.7
ZNF550-207ENST00000595560 FZD1Q9UP38 647 aa19.41■□□□□ 0.7
ZNF550-207ENST00000595560 EXOC6BQ9Y2D4 811 aa19.41■□□□□ 0.7
ZNF550-207ENST00000595560 GAKO14976 1311 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms