RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-205	ENST00000595081	NDUFB9	Q9Y6M9	179 aa		27.99	■■■□□ 2.07
PNKP-205	ENST00000595081	AKAP11	Q9UKA4	1901 aa		27.98	■■■□□ 2.07
PNKP-205	ENST00000595081	CRK	P46108	304 aa		27.98	■■■□□ 2.07
PNKP-205	ENST00000595081	C1QTNF8	P60827	252 aa		27.98	■■■□□ 2.07
PNKP-205	ENST00000595081	FSTL1	Q12841	308 aa		27.98	■■■□□ 2.07
PNKP-205	ENST00000595081	GGA3	Q9NZ52	723 aa		27.98	■■■□□ 2.07
PNKP-205	ENST00000595081	SERPINA10	Q9UK55	444 aa		27.98	■■■□□ 2.07
PNKP-205	ENST00000595081	B4GALNT3	Q6L9W6	998 aa		27.97	■■■□□ 2.07
PNKP-205	ENST00000595081	CNTROB	Q8N137	903 aa		27.97	■■■□□ 2.07
PNKP-205	ENST00000595081	MTMR14	Q8NCE2	650 aa		27.97	■■■□□ 2.07
PNKP-205	ENST00000595081	MAST3	O60307	1309 aa		27.96	■■■□□ 2.07
PNKP-205	ENST00000595081	AOX1	Q06278	1338 aa		27.96	■■■□□ 2.07
PNKP-205	ENST00000595081	SPDYE2B	A6NHP3	402 aa		27.96	■■■□□ 2.07
PNKP-205	ENST00000595081	CYP2E1	P05181	493 aa	Predicted RBP	27.96	■■■□□ 2.07
PNKP-205	ENST00000595081	SPDYE6	P0CI01	402 aa		27.96	■■■□□ 2.07
PNKP-205	ENST00000595081	DIXDC1	Q155Q3	683 aa		27.96	■■■□□ 2.07
PNKP-205	ENST00000595081	ANGEL2	Q5VTE6	544 aa	Known RBP	27.96	■■■□□ 2.07
PNKP-205	ENST00000595081	OTUD7A	Q8TE49	926 aa	Predicted RBP	27.96	■■■□□ 2.07
PNKP-205	ENST00000595081	PRMT6	Q96LA8	375 aa	Predicted RBP	27.96	■■■□□ 2.07
PNKP-205	ENST00000595081	ZBTB47	Q9UFB7	747 aa	Predicted RBP	27.96	■■■□□ 2.07
PNKP-205	ENST00000595081	HDLBP	Q00341	1268 aa	Known RBP	27.95	■■■□□ 2.06
PNKP-205	ENST00000595081	SPTY2D1	Q68D10	685 aa	Predicted RBP	27.95	■■■□□ 2.06
PNKP-205	ENST00000595081	TEKT1	Q969V4	418 aa		27.95	■■■□□ 2.06
PNKP-205	ENST00000595081	NEFL	P07196	543 aa		27.94	■■■□□ 2.06
PNKP-205	ENST00000595081	TSHZ3	Q63HK5	1081 aa		27.94	■■■□□ 2.06
PNKP-205	ENST00000595081	ERICH6	Q7L0X2	663 aa		27.94	■■■□□ 2.06
PNKP-205	ENST00000595081	DZIP1	Q86YF9	867 aa	Known RBP	27.94	■■■□□ 2.06
PNKP-205	ENST00000595081	GLIS2	Q9BZE0	524 aa	Predicted RBP	27.94	■■■□□ 2.06
PNKP-205	ENST00000595081	PIH1D3	Q9NQM4	214 aa	Known RBP	27.94	■■■□□ 2.06
PNKP-205	ENST00000595081	ITGBL1	O95965	494 aa	Predicted RBP	27.93	■■■□□ 2.06
PNKP-205	ENST00000595081	ATP5J	P18859	108 aa		27.93	■■■□□ 2.06
PNKP-205	ENST00000595081	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	27.93	■■■□□ 2.06
PNKP-205	ENST00000595081	DCPS	Q96C86	337 aa	Known RBP	27.93	■■■□□ 2.06
PNKP-205	ENST00000595081	BOLA2	Q9H3K6	86 aa		27.93	■■■□□ 2.06
PNKP-205	ENST00000595081	ECHDC1	Q9NTX5	307 aa		27.93	■■■□□ 2.06
PNKP-205	ENST00000595081	LRP2BP	Q9P2M1	347 aa		27.93	■■■□□ 2.06
PNKP-205	ENST00000595081	SCAF8	Q9UPN6	1271 aa	Known RBP	27.93	■■■□□ 2.06
PNKP-205	ENST00000595081	MECOM	Q03112	1051 aa		27.92	■■■□□ 2.06
PNKP-205	ENST00000595081	DNAJC2	Q99543	621 aa	Known RBP	27.92	■■■□□ 2.06
PNKP-205	ENST00000595081	LNPK	Q9C0E8	428 aa		27.92	■■■□□ 2.06
PNKP-205	ENST00000595081	ANTXR1	Q9H6X2	564 aa		27.92	■■■□□ 2.06
PNKP-205	ENST00000595081	RAI14	Q9P0K7	980 aa		27.92	■■■□□ 2.06
PNKP-205	ENST00000595081	CLRN2	A0PK11	232 aa		27.91	■■■□□ 2.06
PNKP-205	ENST00000595081	TRAF5	O00463	557 aa		27.91	■■■□□ 2.06
PNKP-205	ENST00000595081	FMR1	Q06787	632 aa	Known RBP eCLIP	27.91	■■■□□ 2.06
PNKP-205	ENST00000595081	HHIPL2	Q6UWX4	724 aa		27.91	■■■□□ 2.06
PNKP-205	ENST00000595081	DLK2	Q6UY11	383 aa		27.91	■■■□□ 2.06
PNKP-205	ENST00000595081	KRT26	Q7Z3Y9	468 aa		27.91	■■■□□ 2.06
PNKP-205	ENST00000595081	USP48	Q86UV5	1035 aa		27.91	■■■□□ 2.06
PNKP-205	ENST00000595081	ZNF384	Q8TF68	577 aa		27.91	■■■□□ 2.06
PNKP-205	ENST00000595081	GPATCH3	Q96I76	525 aa		27.91	■■■□□ 2.06
PNKP-205	ENST00000595081	ZDHHC15	Q96MV8	337 aa		27.91	■■■□□ 2.06
PNKP-205	ENST00000595081	MRI	Q9BWK5	157 aa		27.91	■■■□□ 2.06
PNKP-205	ENST00000595081	ADM5	C9JUS6	153 aa		27.9	■■■□□ 2.06
PNKP-205	ENST00000595081	NUCB1	Q02818	461 aa		27.9	■■■□□ 2.06
PNKP-205	ENST00000595081	TDRD3	Q9H7E2	651 aa	Known RBP	27.9	■■■□□ 2.06
PNKP-205	ENST00000595081	DAGLA	Q9Y4D2	1042 aa		27.9	■■■□□ 2.06
PNKP-205	ENST00000595081	MYO1B	O43795	1136 aa		27.89	■■■□□ 2.06
PNKP-205	ENST00000595081	APOBEC3H	Q6NTF7	200 aa	Known RBP	27.89	■■■□□ 2.06
PNKP-205	ENST00000595081	CDC37L1	Q7L3B6	337 aa		27.89	■■■□□ 2.06
PNKP-205	ENST00000595081	SULF1	Q8IWU6	871 aa		27.89	■■■□□ 2.06
PNKP-205	ENST00000595081	NSUN4	Q96CB9	384 aa	Known RBP	27.89	■■■□□ 2.06
PNKP-205	ENST00000595081	EDC3	Q96F86	508 aa	Known RBP	27.89	■■■□□ 2.06
PNKP-205	ENST00000595081	PITPNM2	Q9BZ72	1349 aa		27.89	■■■□□ 2.05
PNKP-205	ENST00000595081	GOLIM4	O00461	696 aa		27.88	■■■□□ 2.05
PNKP-205	ENST00000595081	CHD1L	Q86WJ1	897 aa		27.88	■■■□□ 2.05
PNKP-205	ENST00000595081	HAUS7	Q99871	368 aa		27.88	■■■□□ 2.05
PNKP-205	ENST00000595081	PASK	Q96RG2	1323 aa		27.88	■■■□□ 2.05
PNKP-205	ENST00000595081	SALL3	Q9BXA9	1300 aa		27.88	■■■□□ 2.05
PNKP-205	ENST00000595081	IDH1	O75874	414 aa	Known RBP	27.87	■■■□□ 2.05
PNKP-205	ENST00000595081	MX1	P20591	662 aa		27.87	■■■□□ 2.05
PNKP-205	ENST00000595081	VEZT	Q9HBM0	779 aa		27.87	■■■□□ 2.05
PNKP-205	ENST00000595081	ZNF70	Q9UC06	446 aa	Predicted RBP	27.87	■■■□□ 2.05
PNKP-205	ENST00000595081	POLR2A	P24928	1970 aa	Known RBP	27.87	■■■□□ 2.05
PNKP-205	ENST00000595081	SPDYE2	Q495Y8	402 aa		27.86	■■■□□ 2.05
PNKP-205	ENST00000595081	MYO5A	Q9Y4I1	1855 aa	Known RBP	27.86	■■■□□ 2.05
PNKP-205	ENST00000595081	GAK	O14976	1311 aa		27.86	■■■□□ 2.05
PNKP-205	ENST00000595081	APOBEC3F	Q8IUX4	373 aa	Known RBP	27.85	■■■□□ 2.05
PNKP-205	ENST00000595081	SLF2	Q8IX21	1173 aa		27.85	■■■□□ 2.05
PNKP-205	ENST00000595081	PAG1	Q9NWQ8	432 aa		27.85	■■■□□ 2.05
PNKP-205	ENST00000595081	MROH7-TTC4	A0A0A0MT08	1334 aa		27.85	■■■□□ 2.05
PNKP-205	ENST00000595081	TTC41P	Q6P2S7	1318 aa		27.85	■■■□□ 2.05
PNKP-205	ENST00000595081	MYH2	Q9UKX2	1941 aa		27.84	■■■□□ 2.05
PNKP-205	ENST00000595081	ECM29	Q5VYK3	1845 aa		27.84	■■■□□ 2.05
PNKP-205	ENST00000595081	CACNB3	P54284	484 aa		27.84	■■■□□ 2.05
PNKP-205	ENST00000595081	GSTO1	P78417	241 aa		27.84	■■■□□ 2.05
PNKP-205	ENST00000595081	TTF1	Q15361	905 aa	Predicted RBP	27.84	■■■□□ 2.05
PNKP-205	ENST00000595081	NAA16	Q6N069	864 aa	Predicted RBP	27.84	■■■□□ 2.05
PNKP-205	ENST00000595081	PI4K2B	Q8TCG2	481 aa		27.84	■■■□□ 2.05
PNKP-205	ENST00000595081	FAM163A	Q96GL9	167 aa	Predicted RBP	27.83	■■■□□ 2.05
PNKP-205	ENST00000595081	MAST2	Q6P0Q8	1798 aa		27.83	■■■□□ 2.05
PNKP-205	ENST00000595081	BTD	P43251	543 aa		27.82	■■■□□ 2.04
PNKP-205	ENST00000595081	MAP3K12	Q12852	859 aa		27.82	■■■□□ 2.04
PNKP-205	ENST00000595081	PRAMEF18	Q5VWM3	479 aa		27.82	■■■□□ 2.04
PNKP-205	ENST00000595081	CDC42EP5	Q6NZY7	148 aa		27.82	■■■□□ 2.04
PNKP-205	ENST00000595081	ERC2	O15083	957 aa		27.81	■■■□□ 2.04
PNKP-205	ENST00000595081	LDHC	P07864	332 aa		27.81	■■■□□ 2.04
PNKP-205	ENST00000595081	PDE1A	P54750	535 aa		27.81	■■■□□ 2.04
PNKP-205	ENST00000595081	ADGRA1	Q86SQ6	560 aa		27.81	■■■□□ 2.04
PNKP-205	ENST00000595081	MAGEB6	Q8N7X4	407 aa		27.81	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms