RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 CDAN1Q8IWY9 1227 aa12.4□□□□□ -0.42
NOTCH3-202ENST00000595045 CNKSR2Q8WXI2 1034 aa12.4□□□□□ -0.42
NOTCH3-202ENST00000595045 ZFYVE28Q9HCC9 887 aa12.4□□□□□ -0.42
NOTCH3-202ENST00000595045 CCL15-CCL14A0A0B4J2E2 113 aa12.39□□□□□ -0.43
NOTCH3-202ENST00000595045 KCNJ4P48050 445 aa12.39□□□□□ -0.43
NOTCH3-202ENST00000595045 GRIK5Q16478 980 aa12.39□□□□□ -0.43
NOTCH3-202ENST00000595045 CCL15Q16663 113 aa12.39□□□□□ -0.43
NOTCH3-202ENST00000595045 LMBR1LQ6UX01 489 aa12.39□□□□□ -0.43
NOTCH3-202ENST00000595045 FAM43AQ8N2R8 423 aa12.39□□□□□ -0.43
NOTCH3-202ENST00000595045 SLC17A8Q8NDX2 589 aa12.39□□□□□ -0.43
NOTCH3-202ENST00000595045 SHISA4Q96DD7 197 aa12.39□□□□□ -0.43
NOTCH3-202ENST00000595045 TEPSINQ96N21 525 aa12.39□□□□□ -0.43
NOTCH3-202ENST00000595045 ARHGAP39Q9C0H5 1083 aa12.39□□□□□ -0.43
NOTCH3-202ENST00000595045 MYH16Q9H6N6 1097 aa12.39□□□□□ -0.43
NOTCH3-202ENST00000595045 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
NOTCH3-202ENST00000595045 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.38□□□□□ -0.43
NOTCH3-202ENST00000595045 TDRD7Q8NHU6 1098 aaKnown RBP12.38□□□□□ -0.43
NOTCH3-202ENST00000595045 PUS3Q9BZE2 481 aaKnown RBP12.38□□□□□ -0.43
NOTCH3-202ENST00000595045 FAM205AQ6ZU69 1335 aa12.37□□□□□ -0.43
NOTCH3-202ENST00000595045 GTF2A2P52657 109 aa12.37□□□□□ -0.43
NOTCH3-202ENST00000595045 RBM5P52756 815 aaKnown RBP eCLIP12.37□□□□□ -0.43
NOTCH3-202ENST00000595045 WDR63Q8IWG1 891 aa12.37□□□□□ -0.43
NOTCH3-202ENST00000595045 DPF3Q92784 378 aa12.37□□□□□ -0.43
NOTCH3-202ENST00000595045 FAM84BQ96KN1 310 aaPredicted RBP12.37□□□□□ -0.43
NOTCH3-202ENST00000595045 PRO3102Q9H379 93 aa12.37□□□□□ -0.43
NOTCH3-202ENST00000595045 A0A1B0GUL6 1792 aa12.37□□□□□ -0.43
NOTCH3-202ENST00000595045 LACTBP83111 547 aaPredicted RBP12.36□□□□□ -0.43
NOTCH3-202ENST00000595045 VGLL4Q14135 290 aa12.36□□□□□ -0.43
NOTCH3-202ENST00000595045 MTFR1Q15390 333 aa12.36□□□□□ -0.43
NOTCH3-202ENST00000595045 SPDYE2Q495Y8 402 aa12.36□□□□□ -0.43
NOTCH3-202ENST00000595045 ZNF70Q9UC06 446 aaPredicted RBP12.36□□□□□ -0.43
NOTCH3-202ENST00000595045 RIPOR2Q9Y4F9 1068 aa12.36□□□□□ -0.43
NOTCH3-202ENST00000595045 ARAP2Q8WZ64 1704 aa12.35□□□□□ -0.43
NOTCH3-202ENST00000595045 LAMA2P24043 3122 aaKnown RBP12.35□□□□□ -0.43
NOTCH3-202ENST00000595045 GRM8O00222 908 aa12.35□□□□□ -0.43
NOTCH3-202ENST00000595045 TLR2O60603 784 aa12.35□□□□□ -0.43
NOTCH3-202ENST00000595045 GYG1P46976 350 aa12.35□□□□□ -0.43
NOTCH3-202ENST00000595045 MAP3K9P80192 1104 aa12.35□□□□□ -0.43
NOTCH3-202ENST00000595045 TNFAIP1Q13829 316 aa12.35□□□□□ -0.43
NOTCH3-202ENST00000595045 KIF22Q14807 665 aa12.35□□□□□ -0.43
NOTCH3-202ENST00000595045 LDHAL6AQ6ZMR3 332 aa12.35□□□□□ -0.43
NOTCH3-202ENST00000595045 ZNF804AQ7Z570 1209 aa12.35□□□□□ -0.43
NOTCH3-202ENST00000595045 SUCLG2Q96I99 432 aa12.35□□□□□ -0.43
NOTCH3-202ENST00000595045 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
NOTCH3-202ENST00000595045 GNRH1P01148 92 aa12.34□□□□□ -0.43
NOTCH3-202ENST00000595045 NBPF7P0C2Y1 421 aaPredicted RBP12.34□□□□□ -0.43
NOTCH3-202ENST00000595045 FBXO33Q7Z6M2 555 aa12.34□□□□□ -0.43
NOTCH3-202ENST00000595045 UBE2Q1Q7Z7E8 422 aa12.34□□□□□ -0.43
NOTCH3-202ENST00000595045 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.34□□□□□ -0.43
NOTCH3-202ENST00000595045 TMEM39BQ9GZU3 492 aa12.34□□□□□ -0.43
NOTCH3-202ENST00000595045 TDRD3Q9H7E2 651 aaKnown RBP12.34□□□□□ -0.43
NOTCH3-202ENST00000595045 SERPINA10Q9UK55 444 aa12.34□□□□□ -0.43
NOTCH3-202ENST00000595045 UTYO14607 1347 aa12.34□□□□□ -0.43
NOTCH3-202ENST00000595045 BTBD19C9JJ37 291 aa12.33□□□□□ -0.44
NOTCH3-202ENST00000595045 PLIN1O60240 522 aa12.33□□□□□ -0.44
NOTCH3-202ENST00000595045 WDHD1O75717 1129 aaPredicted RBP12.33□□□□□ -0.44
NOTCH3-202ENST00000595045 ECM2O94769 699 aaPredicted RBP12.33□□□□□ -0.44
NOTCH3-202ENST00000595045 CTGFP29279 349 aa12.33□□□□□ -0.44
NOTCH3-202ENST00000595045 PRMT2P55345 433 aa12.33□□□□□ -0.44
NOTCH3-202ENST00000595045 UBE4AQ14139 1066 aa12.33□□□□□ -0.44
NOTCH3-202ENST00000595045 RABL6Q3YEC7 729 aaPredicted RBP12.33□□□□□ -0.44
NOTCH3-202ENST00000595045 MFSD14BQ5SR56 506 aa12.33□□□□□ -0.44
NOTCH3-202ENST00000595045 DZIP1LQ8IYY4 767 aaKnown RBP12.33□□□□□ -0.44
NOTCH3-202ENST00000595045 ANKRD44Q8N8A2 993 aa12.33□□□□□ -0.44
NOTCH3-202ENST00000595045 VGLL2Q8N8G2 317 aa12.33□□□□□ -0.44
NOTCH3-202ENST00000595045 ZCCHC17Q9NP64 241 aaKnown RBP12.33□□□□□ -0.44
NOTCH3-202ENST00000595045 CHMP3Q9Y3E7 222 aa12.33□□□□□ -0.44
NOTCH3-202ENST00000595045 CSADQ9Y600 493 aa12.33□□□□□ -0.44
NOTCH3-202ENST00000595045 SPDYE5A6NIY4 337 aa12.32□□□□□ -0.44
NOTCH3-202ENST00000595045 TCP10L2B9ZVM9 353 aa12.32□□□□□ -0.44
NOTCH3-202ENST00000595045 ALDH1L1O75891 902 aa12.32□□□□□ -0.44
NOTCH3-202ENST00000595045 CETPP11597 493 aa12.32□□□□□ -0.44
NOTCH3-202ENST00000595045 HIBADHP31937 336 aaKnown RBP12.32□□□□□ -0.44
NOTCH3-202ENST00000595045 CCDC57Q2TAC2 916 aa12.32□□□□□ -0.44
NOTCH3-202ENST00000595045 NKX2-3Q8TAU0 364 aa12.32□□□□□ -0.44
NOTCH3-202ENST00000595045 TRIM47Q96LD4 638 aa12.32□□□□□ -0.44
NOTCH3-202ENST00000595045 HTATIP2Q9BUP3 242 aa12.32□□□□□ -0.44
NOTCH3-202ENST00000595045 SRRDQ9UH36 339 aa12.32□□□□□ -0.44
NOTCH3-202ENST00000595045 TTF2Q9UNY4 1162 aaKnown RBP12.32□□□□□ -0.44
NOTCH3-202ENST00000595045 SNCAIPQ9Y6H5 919 aa12.32□□□□□ -0.44
NOTCH3-202ENST00000595045 ZNF521Q96K83 1311 aa12.32□□□□□ -0.44
NOTCH3-202ENST00000595045 VCANP13611 3396 aa12.32□□□□□ -0.44
NOTCH3-202ENST00000595045 SOX1O00570 391 aaPredicted RBP12.31□□□□□ -0.44
NOTCH3-202ENST00000595045 ZBTB7BO15156 539 aaPredicted RBP12.31□□□□□ -0.44
NOTCH3-202ENST00000595045 GJB1P08034 283 aa12.31□□□□□ -0.44
NOTCH3-202ENST00000595045 CCL5P13501 91 aa12.31□□□□□ -0.44
NOTCH3-202ENST00000595045 GRK4P32298 578 aa12.31□□□□□ -0.44
NOTCH3-202ENST00000595045 CRKP46108 304 aa12.31□□□□□ -0.44
NOTCH3-202ENST00000595045 GJA8P48165 433 aa12.31□□□□□ -0.44
NOTCH3-202ENST00000595045 LRRC24Q50LG9 513 aa12.31□□□□□ -0.44
NOTCH3-202ENST00000595045 C17orf99Q6UX52 265 aa12.31□□□□□ -0.44
NOTCH3-202ENST00000595045 ERO1BQ86YB8 467 aa12.31□□□□□ -0.44
NOTCH3-202ENST00000595045 MRS2Q9HD23 443 aa12.31□□□□□ -0.44
NOTCH3-202ENST00000595045 CNNM1Q9NRU3 951 aa12.31□□□□□ -0.44
NOTCH3-202ENST00000595045 NR2E3Q9Y5X4 410 aa12.31□□□□□ -0.44
NOTCH3-202ENST00000595045 IRF6O14896 467 aa12.3□□□□□ -0.44
NOTCH3-202ENST00000595045 OSBPP22059 807 aa12.3□□□□□ -0.44
NOTCH3-202ENST00000595045 PSMC4P43686 418 aa12.3□□□□□ -0.44
NOTCH3-202ENST00000595045 SNAPC2Q13487 334 aa12.3□□□□□ -0.44
NOTCH3-202ENST00000595045 APOBEC3HQ6NTF7 200 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms