RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 MVPQ14764 893 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-204ENST00000594862 SPDYE2Q495Y8 402 aa21.94■■□□□ 1.1
SHKBP1-204ENST00000594862 ARMC9Q7Z3E5 817 aa21.94■■□□□ 1.1
SHKBP1-204ENST00000594862 REM2Q8IYK8 340 aaPredicted RBP21.94■■□□□ 1.1
SHKBP1-204ENST00000594862 VEZTQ9HBM0 779 aa21.94■■□□□ 1.1
SHKBP1-204ENST00000594862 PDS5AQ29RF7 1337 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-204ENST00000594862 ZBTB7BO15156 539 aaPredicted RBP21.93■■□□□ 1.1
SHKBP1-204ENST00000594862 AOC2O75106 756 aa21.93■■□□□ 1.1
SHKBP1-204ENST00000594862 RLBP1P12271 317 aa21.93■■□□□ 1.1
SHKBP1-204ENST00000594862 TNNI2P48788 182 aa21.93■■□□□ 1.1
SHKBP1-204ENST00000594862 SUPT20HL1Q3ZLR7 823 aa21.93■■□□□ 1.1
SHKBP1-204ENST00000594862 ZGPATQ8N5A5 531 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-204ENST00000594862 CHMP4BQ9H444 224 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-204ENST00000594862 SALL1Q9NSC2 1324 aa21.93■■□□□ 1.1
SHKBP1-204ENST00000594862 PNMA6EA0A0J9YXQ4 647 aa21.92■■□□□ 1.1
SHKBP1-204ENST00000594862 A0A1B0GUL7 405 aa21.92■■□□□ 1.1
SHKBP1-204ENST00000594862 CLRN2A0PK11 232 aa21.92■■□□□ 1.1
SHKBP1-204ENST00000594862 SLC10A3P09131 477 aa21.92■■□□□ 1.1
SHKBP1-204ENST00000594862 ATP8B2P98198 1209 aa21.92■■□□□ 1.1
SHKBP1-204ENST00000594862 TFCP2Q12800 502 aa21.92■■□□□ 1.1
SHKBP1-204ENST00000594862 POLA2Q14181 598 aa21.92■■□□□ 1.1
SHKBP1-204ENST00000594862 SSH3Q8TE77 659 aa21.92■■□□□ 1.1
SHKBP1-204ENST00000594862 TMOD2Q9NZR1 351 aa21.92■■□□□ 1.1
SHKBP1-204ENST00000594862 RCAN3Q9UKA8 241 aa21.92■■□□□ 1.1
SHKBP1-204ENST00000594862 FAM155AB1AL88 458 aaPredicted RBP21.91■■□□□ 1.1
SHKBP1-204ENST00000594862 HHIPL2Q6UWX4 724 aa21.91■■□□□ 1.1
SHKBP1-204ENST00000594862 ZDHHC15Q96MV8 337 aa21.91■■□□□ 1.1
SHKBP1-204ENST00000594862 ZNF70Q9UC06 446 aaPredicted RBP21.91■■□□□ 1.1
SHKBP1-204ENST00000594862 SCAF8Q9UPN6 1271 aaKnown RBP21.91■■□□□ 1.1
SHKBP1-204ENST00000594862 UNCXA6NJT0 531 aa21.9■■□□□ 1.1
SHKBP1-204ENST00000594862 PPP1R12BO60237 982 aaPredicted RBP21.9■■□□□ 1.1
SHKBP1-204ENST00000594862 HSPA8P11142 646 aaKnown RBP21.9■■□□□ 1.1
SHKBP1-204ENST00000594862 PHKA1P46020 1223 aa21.9■■□□□ 1.1
SHKBP1-204ENST00000594862 PRAMEF18Q5VWM3 479 aa21.9■■□□□ 1.1
SHKBP1-204ENST00000594862 CCDC102BQ68D86 513 aa21.9■■□□□ 1.1
SHKBP1-204ENST00000594862 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.9■■□□□ 1.1
SHKBP1-204ENST00000594862 PCDHAC2Q9Y5I4 1007 aa21.9■■□□□ 1.1
SHKBP1-204ENST00000594862 OS9Q13438 667 aaPredicted RBP21.89■■□□□ 1.09
SHKBP1-204ENST00000594862 GORABQ5T7V8 394 aa21.89■■□□□ 1.09
SHKBP1-204ENST00000594862 TDRD3Q9H7E2 651 aaKnown RBP21.89■■□□□ 1.09
SHKBP1-204ENST00000594862 GPR108Q9NPR9 543 aa21.89■■□□□ 1.09
SHKBP1-204ENST00000594862 DDX19BQ9UMR2 479 aa21.89■■□□□ 1.09
SHKBP1-204ENST00000594862 LDHBP07195 334 aaKnown RBP21.88■■□□□ 1.09
SHKBP1-204ENST00000594862 RASA3Q14644 834 aa21.88■■□□□ 1.09
SHKBP1-204ENST00000594862 FKBP1CQ5VVH2 108 aa21.88■■□□□ 1.09
SHKBP1-204ENST00000594862 RASAL3Q86YV0 1011 aa21.88■■□□□ 1.09
SHKBP1-204ENST00000594862 PANK1Q8TE04 598 aa21.88■■□□□ 1.09
SHKBP1-204ENST00000594862 XAGE2Q96GT9 111 aa21.88■■□□□ 1.09
SHKBP1-204ENST00000594862 ADORA1P30542 326 aa21.87■■□□□ 1.09
SHKBP1-204ENST00000594862 TIMM10P62072 90 aa21.87■■□□□ 1.09
SHKBP1-204ENST00000594862 GRIK5Q16478 980 aa21.87■■□□□ 1.09
SHKBP1-204ENST00000594862 MAP3K11Q16584 847 aa21.87■■□□□ 1.09
SHKBP1-204ENST00000594862 SPTY2D1Q68D10 685 aaPredicted RBP21.87■■□□□ 1.09
SHKBP1-204ENST00000594862 NEUROD6Q96NK8 337 aa21.87■■□□□ 1.09
SHKBP1-204ENST00000594862 UBE2Q2LH0YL09 131 aa21.86■■□□□ 1.09
SHKBP1-204ENST00000594862 SURF6O75683 361 aaKnown RBP21.86■■□□□ 1.09
SHKBP1-204ENST00000594862 SLF2Q8IX21 1173 aa21.86■■□□□ 1.09
SHKBP1-204ENST00000594862 HOOK2Q96ED9 719 aa21.86■■□□□ 1.09
SHKBP1-204ENST00000594862 C1orf115Q9H7X2 142 aa21.86■■□□□ 1.09
SHKBP1-204ENST00000594862 SAGE1Q9NXZ1 904 aa21.86■■□□□ 1.09
SHKBP1-204ENST00000594862 ANGEL1Q9UNK9 670 aaKnown RBP21.86■■□□□ 1.09
SHKBP1-204ENST00000594862 NOP58Q9Y2X3 529 aaKnown RBP21.86■■□□□ 1.09
SHKBP1-204ENST00000594862 IREB2P48200 963 aaKnown RBP21.85■■□□□ 1.09
SHKBP1-204ENST00000594862 KIF23Q02241 960 aaPredicted RBP21.85■■□□□ 1.09
SHKBP1-204ENST00000594862 RASGRF1Q13972 1273 aa21.85■■□□□ 1.09
SHKBP1-204ENST00000594862 LDLRAD1Q5T700 205 aa21.85■■□□□ 1.09
SHKBP1-204ENST00000594862 FAM83AQ86UY5 434 aa21.85■■□□□ 1.09
SHKBP1-204ENST00000594862 SSC5DA1L4H1 1573 aa21.85■■□□□ 1.09
SHKBP1-204ENST00000594862 AOX1Q06278 1338 aa21.84■■□□□ 1.09
SHKBP1-204ENST00000594862 UQCRFS1P1P0C7P4 283 aa21.84■■□□□ 1.09
SHKBP1-204ENST00000594862 CEP85Q6P2H3 762 aa21.84■■□□□ 1.09
SHKBP1-204ENST00000594862 MOB2Q70IA6 237 aa21.84■■□□□ 1.09
SHKBP1-204ENST00000594862 RPAP1Q9BWH6 1393 aaPredicted RBP21.84■■□□□ 1.09
SHKBP1-204ENST00000594862 PRDX5P30044 214 aa21.83■■□□□ 1.09
SHKBP1-204ENST00000594862 PDE3AQ14432 1141 aa21.83■■□□□ 1.09
SHKBP1-204ENST00000594862 HSP90AB4PQ58FF6 505 aa21.83■■□□□ 1.09
SHKBP1-204ENST00000594862 APOBEC3HQ6NTF7 200 aaKnown RBP21.83■■□□□ 1.09
SHKBP1-204ENST00000594862 DZIP1Q86YF9 867 aaKnown RBP21.83■■□□□ 1.09
SHKBP1-204ENST00000594862 ERC1Q8IUD2 1116 aa21.83■■□□□ 1.09
SHKBP1-204ENST00000594862 AKAP11Q9UKA4 1901 aa21.82■■□□□ 1.08
SHKBP1-204ENST00000594862 TCP10L2B9ZVM9 353 aa21.82■■□□□ 1.08
SHKBP1-204ENST00000594862 HMMRO75330 724 aa21.82■■□□□ 1.08
SHKBP1-204ENST00000594862 ARID4AP29374 1257 aaPredicted RBP21.82■■□□□ 1.08
SHKBP1-204ENST00000594862 PRKG1Q13976 671 aa21.82■■□□□ 1.08
SHKBP1-204ENST00000594862 TNNI3KQ59H18 835 aa21.82■■□□□ 1.08
SHKBP1-204ENST00000594862 NBPF12Q5TAG4 269 aaPredicted RBP21.82■■□□□ 1.08
SHKBP1-204ENST00000594862 RPAP2Q8IXW5 612 aaPredicted RBP21.82■■□□□ 1.08
SHKBP1-204ENST00000594862 DAGLAQ9Y4D2 1042 aa21.82■■□□□ 1.08
SHKBP1-204ENST00000594862 FPGT-TNNI3KV9GXZ4 949 aa21.82■■□□□ 1.08
SHKBP1-204ENST00000594862 IGSF3O75054 1194 aa21.81■■□□□ 1.08
SHKBP1-204ENST00000594862 SREBF2Q12772 1141 aa21.81■■□□□ 1.08
SHKBP1-204ENST00000594862 CCDC158Q5M9N0 1113 aa21.81■■□□□ 1.08
SHKBP1-204ENST00000594862 ANKRD13AQ8IZ07 590 aa21.81■■□□□ 1.08
SHKBP1-204ENST00000594862 ABHD8Q96I13 439 aa21.81■■□□□ 1.08
SHKBP1-204ENST00000594862 SPATA5Q8NB90 893 aa21.8■■□□□ 1.08
SHKBP1-204ENST00000594862 TEPSINQ96N21 525 aa21.8■■□□□ 1.08
SHKBP1-204ENST00000594862 ZIC5Q96T25 663 aa21.8■■□□□ 1.08
SHKBP1-204ENST00000594862 ABCF2Q9UG63 623 aa21.8■■□□□ 1.08
SHKBP1-204ENST00000594862 COG6Q9Y2V7 657 aa21.8■■□□□ 1.08
SHKBP1-204ENST00000594862 ZBTB48P10074 688 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms