RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 ZNF70Q9UC06 446 aaPredicted RBP29.24■■■□□ 2.27
LSM4-204ENST00000594828 PPP1R12BO60237 982 aaPredicted RBP29.23■■■□□ 2.27
LSM4-204ENST00000594828 IL15P40933 162 aaPredicted RBP29.23■■■□□ 2.27
LSM4-204ENST00000594828 HDLBPQ00341 1268 aaKnown RBP29.23■■■□□ 2.27
LSM4-204ENST00000594828 RASA3Q14644 834 aa29.23■■■□□ 2.27
LSM4-204ENST00000594828 FZD1Q9UP38 647 aa29.23■■■□□ 2.27
LSM4-204ENST00000594828 PA2G4Q9UQ80 394 aaKnown RBP29.23■■■□□ 2.27
LSM4-204ENST00000594828 TNFAIP1Q13829 316 aa29.22■■■□□ 2.27
LSM4-204ENST00000594828 ATP2B3Q16720 1220 aa29.22■■■□□ 2.27
LSM4-204ENST00000594828 ARAP2Q8WZ64 1704 aa29.21■■■□□ 2.27
LSM4-204ENST00000594828 MAP3K11Q16584 847 aa29.21■■■□□ 2.27
LSM4-204ENST00000594828 NBPF12Q5TAG4 269 aaPredicted RBP29.21■■■□□ 2.27
LSM4-204ENST00000594828 CLUAP1Q96AJ1 413 aa29.21■■■□□ 2.27
LSM4-204ENST00000594828 TNNQ9UQP3 1299 aa29.21■■■□□ 2.27
LSM4-204ENST00000594828 TEKT1Q969V4 418 aa29.2■■■□□ 2.26
LSM4-204ENST00000594828 ABHD8Q96I13 439 aa29.2■■■□□ 2.26
LSM4-204ENST00000594828 MRIQ9BWK5 157 aa29.2■■■□□ 2.26
LSM4-204ENST00000594828 SUGT1Q9Y2Z0 365 aa29.2■■■□□ 2.26
LSM4-204ENST00000594828 SRGAP3O43295 1099 aa29.19■■■□□ 2.26
LSM4-204ENST00000594828 MKRN3Q13064 507 aaKnown RBP29.19■■■□□ 2.26
LSM4-204ENST00000594828 WDR66Q8TBY9 1149 aa29.19■■■□□ 2.26
LSM4-204ENST00000594828 AKAP11Q9UKA4 1901 aa29.19■■■□□ 2.26
LSM4-204ENST00000594828 ZKSCAN2Q63HK3 967 aa29.18■■■□□ 2.26
LSM4-204ENST00000594828 SLC10A4Q96EP9 437 aa29.18■■■□□ 2.26
LSM4-204ENST00000594828 GNL3LQ9NVN8 582 aaKnown RBP29.18■■■□□ 2.26
LSM4-204ENST00000594828 SSC5DA1L4H1 1573 aa29.18■■■□□ 2.26
LSM4-204ENST00000594828 CASP8AP2Q9UKL3 1982 aa29.17■■■□□ 2.26
LSM4-204ENST00000594828 TCP10L2B9ZVM9 353 aa29.17■■■□□ 2.26
LSM4-204ENST00000594828 MTX1Q13505 466 aa29.17■■■□□ 2.26
LSM4-204ENST00000594828 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.17■■■□□ 2.26
LSM4-204ENST00000594828 MAST3O60307 1309 aa29.17■■■□□ 2.26
LSM4-204ENST00000594828 GNAI2P04899 355 aa29.16■■■□□ 2.26
LSM4-204ENST00000594828 TM4SF4P48230 202 aa29.16■■■□□ 2.26
LSM4-204ENST00000594828 TNNI2P48788 182 aa29.16■■■□□ 2.26
LSM4-204ENST00000594828 ZDHHC15Q96MV8 337 aa29.16■■■□□ 2.26
LSM4-204ENST00000594828 UNCXA6NJT0 531 aa29.15■■■□□ 2.26
LSM4-204ENST00000594828 USP2O75604 605 aaPredicted RBP29.15■■■□□ 2.26
LSM4-204ENST00000594828 IREB2P48200 963 aaKnown RBP29.15■■■□□ 2.26
LSM4-204ENST00000594828 SPRYD7Q5W111 196 aa29.15■■■□□ 2.26
LSM4-204ENST00000594828 SREBF2Q12772 1141 aa29.14■■■□□ 2.26
LSM4-204ENST00000594828 HHIPL2Q6UWX4 724 aa29.13■■■□□ 2.25
LSM4-204ENST00000594828 TMEM57Q8N5G2 664 aa29.13■■■□□ 2.25
LSM4-204ENST00000594828 CLMNQ96JQ2 1002 aa29.13■■■□□ 2.25
LSM4-204ENST00000594828 TEPSINQ96N21 525 aa29.13■■■□□ 2.25
LSM4-204ENST00000594828 MCOLN1Q9GZU1 580 aa29.13■■■□□ 2.25
LSM4-204ENST00000594828 PHKA1P46020 1223 aa29.12■■■□□ 2.25
LSM4-204ENST00000594828 DGKZQ13574 1117 aa29.12■■■□□ 2.25
LSM4-204ENST00000594828 APOBEC3HQ6NTF7 200 aaKnown RBP29.12■■■□□ 2.25
LSM4-204ENST00000594828 TMEM39BQ9GZU3 492 aa29.12■■■□□ 2.25
LSM4-204ENST00000594828 TMOD2Q9NZR1 351 aa29.12■■■□□ 2.25
LSM4-204ENST00000594828 DENND2AQ9ULE3 1009 aa29.12■■■□□ 2.25
LSM4-204ENST00000594828 SEMA3EO15041 775 aa29.11■■■□□ 2.25
LSM4-204ENST00000594828 ADORA1P30542 326 aa29.11■■■□□ 2.25
LSM4-204ENST00000594828 CACNB3P54284 484 aa29.11■■■□□ 2.25
LSM4-204ENST00000594828 TIMM10P62072 90 aa29.11■■■□□ 2.25
LSM4-204ENST00000594828 AKAP2Q9Y2D5 859 aa29.11■■■□□ 2.25
LSM4-204ENST00000594828 TFCP2Q12800 502 aa29.1■■■□□ 2.25
LSM4-204ENST00000594828 CCDC102BQ68D86 513 aa29.1■■■□□ 2.25
LSM4-204ENST00000594828 CDAN1Q8IWY9 1227 aa29.1■■■□□ 2.25
LSM4-204ENST00000594828 ANKRD13AQ8IZ07 590 aa29.1■■■□□ 2.25
LSM4-204ENST00000594828 ZBED9Q6R2W3 1325 aa29.1■■■□□ 2.25
LSM4-204ENST00000594828 TBC1D8O95759 1140 aa29.09■■■□□ 2.25
LSM4-204ENST00000594828 ZBTB48P10074 688 aaPredicted RBP29.09■■■□□ 2.25
LSM4-204ENST00000594828 WNK4Q96J92 1243 aa29.09■■■□□ 2.25
LSM4-204ENST00000594828 MYH13Q9UKX3 1938 aa29.09■■■□□ 2.25
LSM4-204ENST00000594828 MANSC4A6NHS7 340 aaPredicted RBP29.08■■■□□ 2.25
LSM4-204ENST00000594828 LDHBP07195 334 aaKnown RBP29.08■■■□□ 2.25
LSM4-204ENST00000594828 INHBEP58166 350 aa29.08■■■□□ 2.25
LSM4-204ENST00000594828 PNMA6EA0A0J9YXQ4 647 aa29.07■■■□□ 2.24
LSM4-204ENST00000594828 A0A1B0GUL7 405 aa29.07■■■□□ 2.24
LSM4-204ENST00000594828 ZBTB22O15209 634 aa29.07■■■□□ 2.24
LSM4-204ENST00000594828 PRDX5P30044 214 aa29.07■■■□□ 2.24
LSM4-204ENST00000594828 FKBP1CQ5VVH2 108 aa29.07■■■□□ 2.24
LSM4-204ENST00000594828 FAM83AQ86UY5 434 aa29.07■■■□□ 2.24
LSM4-204ENST00000594828 SALL1Q9NSC2 1324 aa29.07■■■□□ 2.24
LSM4-204ENST00000594828 CCDC85CA6NKD9 419 aa29.06■■■□□ 2.24
LSM4-204ENST00000594828 G3BP1Q13283 466 aaKnown RBP eCLIP29.06■■■□□ 2.24
LSM4-204ENST00000594828 FTSJ3Q8IY81 847 aaKnown RBP29.06■■■□□ 2.24
LSM4-204ENST00000594828 XAGE2Q96GT9 111 aa29.06■■■□□ 2.24
LSM4-204ENST00000594828 DIXDC1Q155Q3 683 aa29.05■■■□□ 2.24
LSM4-204ENST00000594828 DAGLAQ9Y4D2 1042 aa29.05■■■□□ 2.24
LSM4-204ENST00000594828 ZGPATQ8N5A5 531 aaKnown RBP29.04■■■□□ 2.24
LSM4-204ENST00000594828 NEUROD6Q96NK8 337 aa29.04■■■□□ 2.24
LSM4-204ENST00000594828 ALDH1A1P00352 501 aa29.03■■■□□ 2.24
LSM4-204ENST00000594828 MAP3K9P80192 1104 aa29.03■■■□□ 2.24
LSM4-204ENST00000594828 MVPQ14764 893 aaKnown RBP29.03■■■□□ 2.24
LSM4-204ENST00000594828 ELP3Q9H9T3 547 aa29.03■■■□□ 2.24
LSM4-204ENST00000594828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.03■■■□□ 2.24
LSM4-204ENST00000594828 RASGRF1Q13972 1273 aa29.02■■■□□ 2.24
LSM4-204ENST00000594828 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.02■■■□□ 2.24
LSM4-204ENST00000594828 IFNL1Q8IU54 200 aa29.02■■■□□ 2.24
LSM4-204ENST00000594828 HOOK2Q96ED9 719 aa29.02■■■□□ 2.24
LSM4-204ENST00000594828 GPR25O00155 361 aa29.01■■■□□ 2.23
LSM4-204ENST00000594828 GJA5P36382 358 aa29.01■■■□□ 2.23
LSM4-204ENST00000594828 CDC42EP5Q6NZY7 148 aa29.01■■■□□ 2.23
LSM4-204ENST00000594828 ITPRIPQ8IWB1 547 aa29.01■■■□□ 2.23
LSM4-204ENST00000594828 ZNF296Q8WUU4 475 aaPredicted RBP29.01■■■□□ 2.23
LSM4-204ENST00000594828 OPTNQ96CV9 577 aa29.01■■■□□ 2.23
LSM4-204ENST00000594828 CFHR5Q9BXR6 569 aa29.01■■■□□ 2.23
LSM4-204ENST00000594828 PDS5AQ29RF7 1337 aaKnown RBP29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms