RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 PLA2G4DQ86XP0 818 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 TDRD7Q8NHU6 1098 aaKnown RBP5.07□□□□□ -1.6
LRIT3-202ENST00000594814 MAGEC3Q8TD91 643 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 CCDC102AQ96A19 550 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 TMUB1Q9BVT8 246 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 GBP3Q9H0R5 595 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 USP54Q70EL1 1684 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 NBPF7P0C2Y1 421 aaPredicted RBP5.07□□□□□ -1.6
LRIT3-202ENST00000594814 PTPN14Q15678 1187 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 RBM43Q6ZSC3 357 aaKnown RBP5.07□□□□□ -1.6
LRIT3-202ENST00000594814 METTL16Q86W50 562 aaKnown RBP5.07□□□□□ -1.6
LRIT3-202ENST00000594814 LNPKQ9C0E8 428 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 LRRFIP2Q9Y608 721 aaKnown RBP5.07□□□□□ -1.6
LRIT3-202ENST00000594814 FHOD1Q9Y613 1164 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 DCCP43146 1447 aa5.07□□□□□ -1.6
LRIT3-202ENST00000594814 GOLIM4O00461 696 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 KCNQ3O43525 872 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 GPR37L1O60883 481 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 PNMA6AP0CW24 399 aaPredicted RBP5.06□□□□□ -1.6
LRIT3-202ENST00000594814 CTAG1AP78358 180 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 TMEM95Q3KNT9 176 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 ATF7IPQ6VMQ6 1270 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 BRAPQ7Z569 592 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 GPR161Q8N6U8 529 aaKnown RBP5.06□□□□□ -1.6
LRIT3-202ENST00000594814 CCDC191Q8NCU4 936 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 CCDC150Q8NCX0 1101 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 IP6K1Q92551 441 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 SPOCK2Q92563 424 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 ARMC5Q96C12 935 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 BCL2L13Q9BXK5 485 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 ACAD8Q9UKU7 415 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 AMPHP49418 695 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 POU5F1Q01860 360 aaKnown RBP5.06□□□□□ -1.6
LRIT3-202ENST00000594814 CRYMQ14894 314 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 PLCB4Q15147 1175 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 MAPRE1Q15691 268 aaKnown RBP5.06□□□□□ -1.6
LRIT3-202ENST00000594814 ECM1Q16610 540 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 AMHR2Q16671 573 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 TBC1D9Q6ZT07 1266 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 MICALL1Q8N3F8 863 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 IL17REQ8NFR9 667 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 BICD2Q8TD16 824 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 USP26Q9BXU7 913 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 DDX19AQ9NUU7 478 aaKnown RBP5.06□□□□□ -1.6
LRIT3-202ENST00000594814 CLIP2Q9UDT6 1046 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 SUFUQ9UMX1 484 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 SBNO1A3KN83 1393 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 PHRF1Q9P1Y6 1649 aaKnown RBP5.06□□□□□ -1.6
LRIT3-202ENST00000594814 IGSF1Q8N6C5 1336 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 PRAMEF22A3QJZ6 481 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 SRRM3A6NNA2 597 aaPredicted RBP5.06□□□□□ -1.6
LRIT3-202ENST00000594814 USP2O75604 605 aaPredicted RBP5.06□□□□□ -1.6
LRIT3-202ENST00000594814 MCM3P25205 808 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 CLK1P49759 484 aaKnown RBP5.06□□□□□ -1.6
LRIT3-202ENST00000594814 CCDC93Q567U6 631 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 KIAA1614Q5VZ46 1190 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 SYT10Q6XYQ8 523 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 PROCA1Q8NCQ7 364 aaPredicted RBP5.06□□□□□ -1.6
LRIT3-202ENST00000594814 DNAAF4Q8WXU2 420 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 ERCC4Q92889 916 aaPredicted RBP5.06□□□□□ -1.6
LRIT3-202ENST00000594814 KCNF1Q9H3M0 494 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 PUF60Q9UHX1 559 aaKnown RBP5.06□□□□□ -1.6
LRIT3-202ENST00000594814 DNAI1Q9UI46 699 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 AOX1Q06278 1338 aa5.06□□□□□ -1.6
LRIT3-202ENST00000594814 TNS3Q68CZ2 1445 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 COL22A1Q8NFW1 1626 aaPredicted RBP5.05□□□□□ -1.6
LRIT3-202ENST00000594814 ELL2O00472 640 aaPredicted RBP5.05□□□□□ -1.6
LRIT3-202ENST00000594814 CCT2P78371 535 aaKnown RBP5.05□□□□□ -1.6
LRIT3-202ENST00000594814 CBLBQ13191 982 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 PDCD2Q16342 344 aaPredicted RBP5.05□□□□□ -1.6
LRIT3-202ENST00000594814 PKN1Q16512 942 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 CT47A1Q5JQC4 288 aaPredicted RBP5.05□□□□□ -1.6
LRIT3-202ENST00000594814 LARP1Q6PKG0 1096 aaKnown RBP5.05□□□□□ -1.6
LRIT3-202ENST00000594814 DZIP3Q86Y13 1208 aaKnown RBP5.05□□□□□ -1.6
LRIT3-202ENST00000594814 SLC43A3Q8NBI5 491 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 PANK1Q8TE04 598 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 ANKRD24Q8TF21 1146 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 RSPH1Q8WYR4 309 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 RUBCNQ92622 972 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 CFAP53Q96M91 514 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 TTC14Q96N46 770 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 NELL2Q99435 816 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 ZSCAN16Q9H4T2 348 aaPredicted RBP5.05□□□□□ -1.6
LRIT3-202ENST00000594814 GGA2Q9UJY4 613 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 DLG5Q8TDM6 1919 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 AHDC1Q5TGY3 1603 aaPredicted RBP5.05□□□□□ -1.6
LRIT3-202ENST00000594814 SMC2O95347 1197 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 HOXC13P31276 330 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 UBE4AQ14139 1066 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 TPD52L1Q16890 204 aaPredicted RBP5.05□□□□□ -1.6
LRIT3-202ENST00000594814 FBXO38Q6PIJ6 1188 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 CCBE1Q6UXH8 406 aaPredicted RBP5.05□□□□□ -1.6
LRIT3-202ENST00000594814 RELTQ969Z4 430 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 OSBPL3Q9H4L5 887 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 VIPAS39Q9H9C1 493 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 HOMER3Q9NSC5 361 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 GINM1Q9NU53 330 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 ZNF446Q9NWS9 450 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 FLT4P35916 1363 aa5.05□□□□□ -1.6
LRIT3-202ENST00000594814 FCHSD2O94868 740 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms