RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 CTGFP29279 349 aa11.77□□□□□ -0.53
SRRM1-221ENST00000593639 UBE2Q1Q7Z7E8 422 aa11.77□□□□□ -0.53
SRRM1-221ENST00000593639 SLC17A8Q8NDX2 589 aa11.77□□□□□ -0.53
SRRM1-221ENST00000593639 CHMP4AQ9BY43 222 aa11.77□□□□□ -0.53
SRRM1-221ENST00000593639 SERPINA10Q9UK55 444 aa11.77□□□□□ -0.53
SRRM1-221ENST00000593639 TTF2Q9UNY4 1162 aaKnown RBP11.77□□□□□ -0.53
SRRM1-221ENST00000593639 CSADQ9Y600 493 aa11.77□□□□□ -0.53
SRRM1-221ENST00000593639 KIF22Q14807 665 aa11.76□□□□□ -0.53
SRRM1-221ENST00000593639 MFSD14BQ5SR56 506 aa11.76□□□□□ -0.53
SRRM1-221ENST00000593639 DZIP1LQ8IYY4 767 aaKnown RBP11.76□□□□□ -0.53
SRRM1-221ENST00000593639 TSR2Q969E8 191 aaKnown RBP11.76□□□□□ -0.53
SRRM1-221ENST00000593639 STK31Q9BXU1 1019 aa11.76□□□□□ -0.53
SRRM1-221ENST00000593639 SNCAIPQ9Y6H5 919 aa11.76□□□□□ -0.53
SRRM1-221ENST00000593639 FAM205AQ6ZU69 1335 aa11.76□□□□□ -0.53
SRRM1-221ENST00000593639 LAMB1P07942 1786 aa11.76□□□□□ -0.53
SRRM1-221ENST00000593639 IRF6O14896 467 aa11.75□□□□□ -0.53
SRRM1-221ENST00000593639 GNRH1P01148 92 aa11.75□□□□□ -0.53
SRRM1-221ENST00000593639 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
SRRM1-221ENST00000593639 CETPP11597 493 aa11.75□□□□□ -0.53
SRRM1-221ENST00000593639 PRMT2P55345 433 aa11.75□□□□□ -0.53
SRRM1-221ENST00000593639 FOXO4P98177 505 aa11.75□□□□□ -0.53
SRRM1-221ENST00000593639 IFIT5Q13325 482 aaKnown RBP11.75□□□□□ -0.53
SRRM1-221ENST00000593639 GRIK5Q16478 980 aa11.75□□□□□ -0.53
SRRM1-221ENST00000593639 C17orf99Q6UX52 265 aa11.75□□□□□ -0.53
SRRM1-221ENST00000593639 MYH16Q9H6N6 1097 aa11.75□□□□□ -0.53
SRRM1-221ENST00000593639 ZCCHC17Q9NP64 241 aaKnown RBP11.75□□□□□ -0.53
SRRM1-221ENST00000593639 SPEF2Q9C093 1822 aa11.74□□□□□ -0.53
SRRM1-221ENST00000593639 PLIN1O60240 522 aa11.74□□□□□ -0.53
SRRM1-221ENST00000593639 WDHD1O75717 1129 aaPredicted RBP11.74□□□□□ -0.53
SRRM1-221ENST00000593639 CRKP46108 304 aa11.74□□□□□ -0.53
SRRM1-221ENST00000593639 GJA8P48165 433 aa11.74□□□□□ -0.53
SRRM1-221ENST00000593639 CACNB3P54284 484 aa11.74□□□□□ -0.53
SRRM1-221ENST00000593639 FLIIQ13045 1269 aa11.74□□□□□ -0.53
SRRM1-221ENST00000593639 SNAPC2Q13487 334 aa11.74□□□□□ -0.53
SRRM1-221ENST00000593639 ERO1BQ86YB8 467 aa11.74□□□□□ -0.53
SRRM1-221ENST00000593639 LINS1Q8NG48 757 aa11.74□□□□□ -0.53
SRRM1-221ENST00000593639 TDRD7Q8NHU6 1098 aaKnown RBP11.74□□□□□ -0.53
SRRM1-221ENST00000593639 DNAAF4Q8WXU2 420 aa11.74□□□□□ -0.53
SRRM1-221ENST00000593639 ZKSCAN4Q969J2 545 aaPredicted RBP11.74□□□□□ -0.53
SRRM1-221ENST00000593639 ZNF594Q96JF6 807 aaPredicted RBP11.74□□□□□ -0.53
SRRM1-221ENST00000593639 TRIM47Q96LD4 638 aa11.74□□□□□ -0.53
SRRM1-221ENST00000593639 SRRDQ9UH36 339 aa11.74□□□□□ -0.53
SRRM1-221ENST00000593639 CPA4Q9UI42 421 aa11.74□□□□□ -0.53
SRRM1-221ENST00000593639 CHMP3Q9Y3E7 222 aa11.74□□□□□ -0.53
SRRM1-221ENST00000593639 GJB1P08034 283 aa11.73□□□□□ -0.53
SRRM1-221ENST00000593639 OSBPP22059 807 aa11.73□□□□□ -0.53
SRRM1-221ENST00000593639 PSMC4P43686 418 aa11.73□□□□□ -0.53
SRRM1-221ENST00000593639 GYG1P46976 350 aa11.73□□□□□ -0.53
SRRM1-221ENST00000593639 TNNI2P48788 182 aa11.73□□□□□ -0.53
SRRM1-221ENST00000593639 TWISTNBQ3B726 338 aaPredicted RBP11.73□□□□□ -0.53
SRRM1-221ENST00000593639 EPHA10Q5JZY3 1008 aa11.73□□□□□ -0.53
SRRM1-221ENST00000593639 NKX2-3Q8TAU0 364 aa11.73□□□□□ -0.53
SRRM1-221ENST00000593639 WRNIP1Q96S55 665 aa11.73□□□□□ -0.53
SRRM1-221ENST00000593639 RIPOR2Q9Y4F9 1068 aa11.73□□□□□ -0.53
SRRM1-221ENST00000593639 SOX1O00570 391 aaPredicted RBP11.72□□□□□ -0.53
SRRM1-221ENST00000593639 ZBTB7BO15156 539 aaPredicted RBP11.72□□□□□ -0.53
SRRM1-221ENST00000593639 CCL5P13501 91 aa11.72□□□□□ -0.53
SRRM1-221ENST00000593639 HIBADHP31937 336 aaKnown RBP11.72□□□□□ -0.53
SRRM1-221ENST00000593639 GRK4P32298 578 aa11.72□□□□□ -0.53
SRRM1-221ENST00000593639 PPIL2Q13356 520 aa11.72□□□□□ -0.53
SRRM1-221ENST00000593639 FKBP5Q13451 457 aaPredicted RBP11.72□□□□□ -0.53
SRRM1-221ENST00000593639 LMBR1LQ6UX01 489 aa11.72□□□□□ -0.53
SRRM1-221ENST00000593639 LDHAL6AQ6ZMR3 332 aa11.72□□□□□ -0.53
SRRM1-221ENST00000593639 RAET1EQ8TD07 263 aa11.72□□□□□ -0.53
SRRM1-221ENST00000593639 FAM84BQ96KN1 310 aaPredicted RBP11.72□□□□□ -0.53
SRRM1-221ENST00000593639 HTATIP2Q9BUP3 242 aa11.72□□□□□ -0.53
SRRM1-221ENST00000593639 OTOFQ9HC10 1997 aa11.72□□□□□ -0.53
SRRM1-221ENST00000593639 MYPNQ86TC9 1320 aa11.71□□□□□ -0.53
SRRM1-221ENST00000593639 ADGRA2Q96PE1 1338 aa11.71□□□□□ -0.53
SRRM1-221ENST00000593639 FMNL1O95466 1100 aaPredicted RBP11.71□□□□□ -0.53
SRRM1-221ENST00000593639 DDX10Q13206 875 aaKnown RBP11.71□□□□□ -0.53
SRRM1-221ENST00000593639 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.71□□□□□ -0.53
SRRM1-221ENST00000593639 LRCH3Q96II8 777 aa11.71□□□□□ -0.53
SRRM1-221ENST00000593639 RNF208Q9H0X6 261 aa11.71□□□□□ -0.53
SRRM1-221ENST00000593639 CNNM1Q9NRU3 951 aa11.71□□□□□ -0.53
SRRM1-221ENST00000593639 NR2E3Q9Y5X4 410 aa11.71□□□□□ -0.53
SRRM1-221ENST00000593639 UNC80Q8N2C7 3258 aa11.71□□□□□ -0.54
SRRM1-221ENST00000593639 ZSWIM8A7E2V4 1837 aa11.7□□□□□ -0.54
SRRM1-221ENST00000593639 PDHXO00330 501 aa11.7□□□□□ -0.54
SRRM1-221ENST00000593639 FARP2O94887 1054 aaPredicted RBP11.7□□□□□ -0.54
SRRM1-221ENST00000593639 HOXD10P28358 340 aa11.7□□□□□ -0.54
SRRM1-221ENST00000593639 PRKCZQ05513 592 aa11.7□□□□□ -0.54
SRRM1-221ENST00000593639 UBE4AQ14139 1066 aa11.7□□□□□ -0.54
SRRM1-221ENST00000593639 CCDC57Q2TAC2 916 aa11.7□□□□□ -0.54
SRRM1-221ENST00000593639 TAF7LQ5H9L4 462 aa11.7□□□□□ -0.54
SRRM1-221ENST00000593639 ANKRD23Q86SG2 305 aa11.7□□□□□ -0.54
SRRM1-221ENST00000593639 U2AF1L4Q8WU68 220 aaKnown RBP11.7□□□□□ -0.54
SRRM1-221ENST00000593639 MYH3P11055 1940 aa11.7□□□□□ -0.54
SRRM1-221ENST00000593639 VCANP13611 3396 aa11.69□□□□□ -0.54
SRRM1-221ENST00000593639 F6X3S4 739 aa11.69□□□□□ -0.54
SRRM1-221ENST00000593639 INPP5BP32019 993 aa11.69□□□□□ -0.54
SRRM1-221ENST00000593639 PPATQ06203 517 aa11.69□□□□□ -0.54
SRRM1-221ENST00000593639 CHAF1AQ13111 956 aaPredicted RBP11.69□□□□□ -0.54
SRRM1-221ENST00000593639 MOGSQ13724 837 aa11.69□□□□□ -0.54
SRRM1-221ENST00000593639 BEND3Q5T5X7 828 aa11.69□□□□□ -0.54
SRRM1-221ENST00000593639 APOBEC3HQ6NTF7 200 aaKnown RBP11.69□□□□□ -0.54
SRRM1-221ENST00000593639 MIGA2Q7L4E1 593 aa11.69□□□□□ -0.54
SRRM1-221ENST00000593639 FAM83AQ86UY5 434 aa11.69□□□□□ -0.54
SRRM1-221ENST00000593639 PUS3Q9BZE2 481 aaKnown RBP11.69□□□□□ -0.54
SRRM1-221ENST00000593639 UNC93B1Q9H1C4 597 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms