RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 AGXT2Q9BYV1 514 aa14.12□□□□□ -0.15
NPC1-214ENST00000593280 ARMT1Q9H993 441 aa14.12□□□□□ -0.15
NPC1-214ENST00000593280 RAI14Q9P0K7 980 aa14.12□□□□□ -0.15
NPC1-214ENST00000593280 ANKIB1Q9P2G1 1089 aa14.12□□□□□ -0.15
NPC1-214ENST00000593280 CCDC88AQ3V6T2 1871 aa14.12□□□□□ -0.15
NPC1-214ENST00000593280 XDHP47989 1333 aa14.12□□□□□ -0.15
NPC1-214ENST00000593280 ANKRD31Q8N7Z5 1873 aa14.12□□□□□ -0.15
NPC1-214ENST00000593280 LRRC37AA6NMS7 1700 aa14.12□□□□□ -0.15
NPC1-214ENST00000593280 PATL2C9JE40 543 aaKnown RBP14.12□□□□□ -0.15
NPC1-214ENST00000593280 ZSCAN22P10073 491 aaPredicted RBP14.12□□□□□ -0.15
NPC1-214ENST00000593280 LEMD3Q9Y2U8 911 aa14.12□□□□□ -0.15
NPC1-214ENST00000593280 WDR19Q8NEZ3 1342 aa14.11□□□□□ -0.15
NPC1-214ENST00000593280 KIAA1551Q9HCM1 1747 aa14.11□□□□□ -0.15
NPC1-214ENST00000593280 PDIA4P13667 645 aaKnown RBP14.11□□□□□ -0.15
NPC1-214ENST00000593280 CYP7A1P22680 504 aa14.11□□□□□ -0.15
NPC1-214ENST00000593280 MCM5P33992 734 aa14.11□□□□□ -0.15
NPC1-214ENST00000593280 MB21D2Q8IYB1 491 aaPredicted RBP14.11□□□□□ -0.15
NPC1-214ENST00000593280 LCORLQ8N3X6 602 aa14.11□□□□□ -0.15
NPC1-214ENST00000593280 FBXL16Q8N461 479 aa14.11□□□□□ -0.15
NPC1-214ENST00000593280 NACAP1Q9BZK3 213 aa14.11□□□□□ -0.15
NPC1-214ENST00000593280 NAPBQ9H115 298 aa14.11□□□□□ -0.15
NPC1-214ENST00000593280 IRS2Q9Y4H2 1338 aa14.1□□□□□ -0.15
NPC1-214ENST00000593280 PRC1O43663 620 aa14.1□□□□□ -0.15
NPC1-214ENST00000593280 PFKFB2O60825 505 aa14.1□□□□□ -0.15
NPC1-214ENST00000593280 PDCP20941 246 aa14.1□□□□□ -0.15
NPC1-214ENST00000593280 APOBRQ0VD83 1088 aa14.1□□□□□ -0.15
NPC1-214ENST00000593280 TRDNQ13061 729 aa14.1□□□□□ -0.15
NPC1-214ENST00000593280 CHST3Q7LGC8 479 aa14.1□□□□□ -0.15
NPC1-214ENST00000593280 TBC1D10CQ8IV04 446 aa14.1□□□□□ -0.15
NPC1-214ENST00000593280 IFNL3Q8IZI9 196 aa14.1□□□□□ -0.15
NPC1-214ENST00000593280 FLAD1Q8NFF5 587 aa14.1□□□□□ -0.15
NPC1-214ENST00000593280 NBPF3Q9H094 633 aa14.1□□□□□ -0.15
NPC1-214ENST00000593280 GZF1Q9H116 711 aaPredicted RBP14.1□□□□□ -0.15
NPC1-214ENST00000593280 EPB41L4AQ9HCS5 686 aaPredicted RBP14.1□□□□□ -0.15
NPC1-214ENST00000593280 LMBRD1Q9NUN5 540 aa14.1□□□□□ -0.15
NPC1-214ENST00000593280 SLC4A4Q9Y6R1 1079 aa14.1□□□□□ -0.15
NPC1-214ENST00000593280 MAGEB6P1A0A0J9YX57 407 aa14.09□□□□□ -0.15
NPC1-214ENST00000593280 ZBTB22O15209 634 aa14.09□□□□□ -0.15
NPC1-214ENST00000593280 F13A1P00488 732 aa14.09□□□□□ -0.15
NPC1-214ENST00000593280 COL23A1Q86Y22 540 aaPredicted RBP14.09□□□□□ -0.15
NPC1-214ENST00000593280 NLGN1Q8N2Q7 840 aa14.09□□□□□ -0.15
NPC1-214ENST00000593280 MIGA1Q8NAN2 632 aa14.09□□□□□ -0.15
NPC1-214ENST00000593280 ATP6V1DQ9Y5K8 247 aa14.09□□□□□ -0.15
NPC1-214ENST00000593280 DUOX1Q9NRD9 1551 aa14.09□□□□□ -0.15
NPC1-214ENST00000593280 VPS37CA5D8V6 355 aaPredicted RBP14.08□□□□□ -0.15
NPC1-214ENST00000593280 GSG1L2A8MUP6 293 aa14.08□□□□□ -0.15
NPC1-214ENST00000593280 PRPF40AO75400 957 aaKnown RBP14.08□□□□□ -0.15
NPC1-214ENST00000593280 HOXA10P31260 410 aaPredicted RBP14.08□□□□□ -0.15
NPC1-214ENST00000593280 TDO2P48775 406 aa14.08□□□□□ -0.15
NPC1-214ENST00000593280 SCRN1Q12765 414 aa14.08□□□□□ -0.15
NPC1-214ENST00000593280 CHAF1AQ13111 956 aaPredicted RBP14.08□□□□□ -0.15
NPC1-214ENST00000593280 KLHL40Q2TBA0 621 aa14.08□□□□□ -0.15
NPC1-214ENST00000593280 LARP1BQ659C4 914 aaKnown RBP14.08□□□□□ -0.15
NPC1-214ENST00000593280 NAA16Q6N069 864 aaPredicted RBP14.08□□□□□ -0.15
NPC1-214ENST00000593280 ADGRA1Q86SQ6 560 aa14.08□□□□□ -0.15
NPC1-214ENST00000593280 ZNF274Q96GC6 653 aaPredicted RBP14.08□□□□□ -0.15
NPC1-214ENST00000593280 LLPHQ9BRT6 129 aaKnown RBP14.08□□□□□ -0.15
NPC1-214ENST00000593280 MTMR6Q9Y217 621 aa14.08□□□□□ -0.15
NPC1-214ENST00000593280 DDX49Q9Y6V7 483 aaKnown RBP14.08□□□□□ -0.15
NPC1-214ENST00000593280 PRKAB2O43741 272 aa14.08□□□□□ -0.16
NPC1-214ENST00000593280 DTNBO60941 627 aa14.08□□□□□ -0.16
NPC1-214ENST00000593280 ANTXR2P58335 489 aa14.08□□□□□ -0.16
NPC1-214ENST00000593280 ZNF804AQ7Z570 1209 aa14.08□□□□□ -0.16
NPC1-214ENST00000593280 TXNRD3Q86VQ6 643 aa14.08□□□□□ -0.16
NPC1-214ENST00000593280 CHMP4CQ96CF2 233 aa14.08□□□□□ -0.16
NPC1-214ENST00000593280 CHAMP1Q96JM3 812 aa14.08□□□□□ -0.16
NPC1-214ENST00000593280 CRAMP1Q96RY5 1269 aa14.08□□□□□ -0.16
NPC1-214ENST00000593280 NAP1L2Q9ULW6 460 aaPredicted RBP14.08□□□□□ -0.16
NPC1-214ENST00000593280 LTBP1Q14766 1721 aa14.08□□□□□ -0.16
NPC1-214ENST00000593280 COL11A2P13942 1736 aaPredicted RBP14.07□□□□□ -0.16
NPC1-214ENST00000593280 KLRG2A4D1S0 409 aaPredicted RBP14.07□□□□□ -0.16
NPC1-214ENST00000593280 BBOX1O75936 387 aa14.07□□□□□ -0.16
NPC1-214ENST00000593280 GPSM2P81274 684 aa14.07□□□□□ -0.16
NPC1-214ENST00000593280 TMED8Q6PL24 325 aaPredicted RBP14.07□□□□□ -0.16
NPC1-214ENST00000593280 C15orf52Q6ZUT6 534 aaKnown RBP14.07□□□□□ -0.16
NPC1-214ENST00000593280 SLC51AQ86UW1 340 aa14.07□□□□□ -0.16
NPC1-214ENST00000593280 NEDD4P46934 1319 aa14.07□□□□□ -0.16
NPC1-214ENST00000593280 LAMB1P07942 1786 aa14.06□□□□□ -0.16
NPC1-214ENST00000593280 JAK2O60674 1132 aa14.06□□□□□ -0.16
NPC1-214ENST00000593280 UFL1O94874 794 aa14.06□□□□□ -0.16
NPC1-214ENST00000593280 ATP2B4P23634 1241 aa14.06□□□□□ -0.16
NPC1-214ENST00000593280 PDIA3P30101 505 aaKnown RBP14.06□□□□□ -0.16
NPC1-214ENST00000593280 EVCP57679 992 aa14.06□□□□□ -0.16
NPC1-214ENST00000593280 FOXD4L6Q3SYB3 417 aaPredicted RBP14.06□□□□□ -0.16
NPC1-214ENST00000593280 SPTY2D1Q68D10 685 aaPredicted RBP14.06□□□□□ -0.16
NPC1-214ENST00000593280 FOXD4L3Q6VB84 417 aaPredicted RBP14.06□□□□□ -0.16
NPC1-214ENST00000593280 TMC4Q7Z404 712 aa14.06□□□□□ -0.16
NPC1-214ENST00000593280 RIOK1Q9BRS2 568 aaKnown RBP14.06□□□□□ -0.16
NPC1-214ENST00000593280 CNNM2Q9H8M5 875 aa14.06□□□□□ -0.16
NPC1-214ENST00000593280 GGA1Q9UJY5 639 aa14.06□□□□□ -0.16
NPC1-214ENST00000593280 CCT2P78371 535 aaKnown RBP14.05□□□□□ -0.16
NPC1-214ENST00000593280 HMGN5P82970 282 aaKnown RBP14.05□□□□□ -0.16
NPC1-214ENST00000593280 MECOMQ03112 1051 aa14.05□□□□□ -0.16
NPC1-214ENST00000593280 CTDSPL2Q05D32 466 aa14.05□□□□□ -0.16
NPC1-214ENST00000593280 SMARCC2Q8TAQ2 1214 aa14.05□□□□□ -0.16
NPC1-214ENST00000593280 NSUN4Q96CB9 384 aaKnown RBP14.05□□□□□ -0.16
NPC1-214ENST00000593280 BRIP1Q9BX63 1249 aa14.05□□□□□ -0.16
NPC1-214ENST00000593280 GPHNQ9NQX3 736 aaPredicted RBP14.05□□□□□ -0.16
NPC1-214ENST00000593280 NSFL1CQ9UNZ2 370 aaKnown RBP14.05□□□□□ -0.16
NPC1-214ENST00000593280 TCHHQ07283 1943 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms