RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 SPDYE2Q495Y8 402 aa16.31■□□□□ 0.2
PRKCSH-218ENST00000593053 LDLRAD1Q5T700 205 aa16.31■□□□□ 0.2
PRKCSH-218ENST00000593053 ATF7IPQ6VMQ6 1270 aa16.31■□□□□ 0.2
PRKCSH-218ENST00000593053 REM2Q8IYK8 340 aaPredicted RBP16.31■□□□□ 0.2
PRKCSH-218ENST00000593053 IL15P40933 162 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-218ENST00000593053 SUPT20HL1Q3ZLR7 823 aa16.3■□□□□ 0.2
PRKCSH-218ENST00000593053 NBPF12Q5TAG4 269 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-218ENST00000593053 CLUAP1Q96AJ1 413 aa16.3■□□□□ 0.2
PRKCSH-218ENST00000593053 ABHD8Q96I13 439 aa16.3■□□□□ 0.2
PRKCSH-218ENST00000593053 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-218ENST00000593053 SSC5DA1L4H1 1573 aa16.3■□□□□ 0.2
PRKCSH-218ENST00000593053 SRGAP3O43295 1099 aa16.29■□□□□ 0.2
PRKCSH-218ENST00000593053 PPP1R12BO60237 982 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-218ENST00000593053 HDLBPQ00341 1268 aaKnown RBP16.29■□□□□ 0.2
PRKCSH-218ENST00000593053 TNFAIP1Q13829 316 aa16.29■□□□□ 0.2
PRKCSH-218ENST00000593053 COPRSQ9NQ92 184 aa16.29■□□□□ 0.2
PRKCSH-218ENST00000593053 TCP10L2B9ZVM9 353 aa16.28■□□□□ 0.2
PRKCSH-218ENST00000593053 TEKT1Q969V4 418 aa16.28■□□□□ 0.2
PRKCSH-218ENST00000593053 MTX1Q13505 466 aa16.27■□□□□ 0.2
PRKCSH-218ENST00000593053 MAP3K11Q16584 847 aa16.27■□□□□ 0.2
PRKCSH-218ENST00000593053 SPRYD7Q5W111 196 aa16.27■□□□□ 0.2
PRKCSH-218ENST00000593053 ZKSCAN2Q63HK3 967 aa16.27■□□□□ 0.2
PRKCSH-218ENST00000593053 WDR66Q8TBY9 1149 aa16.27■□□□□ 0.2
PRKCSH-218ENST00000593053 SLC10A4Q96EP9 437 aa16.27■□□□□ 0.2
PRKCSH-218ENST00000593053 CLMNQ96JQ2 1002 aa16.27■□□□□ 0.2
PRKCSH-218ENST00000593053 SUGT1Q9Y2Z0 365 aa16.27■□□□□ 0.2
PRKCSH-218ENST00000593053 MAST3O60307 1309 aa16.26■□□□□ 0.19
PRKCSH-218ENST00000593053 GNAI2P04899 355 aa16.26■□□□□ 0.19
PRKCSH-218ENST00000593053 CACNB3P54284 484 aa16.26■□□□□ 0.19
PRKCSH-218ENST00000593053 DGKZQ13574 1117 aa16.26■□□□□ 0.19
PRKCSH-218ENST00000593053 CDAN1Q8IWY9 1227 aa16.26■□□□□ 0.19
PRKCSH-218ENST00000593053 ZDHHC15Q96MV8 337 aa16.26■□□□□ 0.19
PRKCSH-218ENST00000593053 MRIQ9BWK5 157 aa16.26■□□□□ 0.19
PRKCSH-218ENST00000593053 MCOLN1Q9GZU1 580 aa16.26■□□□□ 0.19
PRKCSH-218ENST00000593053 TMEM39BQ9GZU3 492 aa16.26■□□□□ 0.19
PRKCSH-218ENST00000593053 GNL3LQ9NVN8 582 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-218ENST00000593053 USP2O75604 605 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-218ENST00000593053 ADORA1P30542 326 aa16.25■□□□□ 0.19
PRKCSH-218ENST00000593053 PHKA1P46020 1223 aa16.25■□□□□ 0.19
PRKCSH-218ENST00000593053 IREB2P48200 963 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-218ENST00000593053 TM4SF4P48230 202 aa16.25■□□□□ 0.19
PRKCSH-218ENST00000593053 TNNI2P48788 182 aa16.25■□□□□ 0.19
PRKCSH-218ENST00000593053 TMEM57Q8N5G2 664 aa16.25■□□□□ 0.19
PRKCSH-218ENST00000593053 TEPSINQ96N21 525 aa16.25■□□□□ 0.19
PRKCSH-218ENST00000593053 ARAP2Q8WZ64 1704 aa16.25■□□□□ 0.19
PRKCSH-218ENST00000593053 SREBF2Q12772 1141 aa16.24■□□□□ 0.19
PRKCSH-218ENST00000593053 TFCP2Q12800 502 aa16.24■□□□□ 0.19
PRKCSH-218ENST00000593053 APOBEC3HQ6NTF7 200 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-218ENST00000593053 TMOD2Q9NZR1 351 aa16.24■□□□□ 0.19
PRKCSH-218ENST00000593053 ZBED9Q6R2W3 1325 aa16.23■□□□□ 0.19
PRKCSH-218ENST00000593053 UNCXA6NJT0 531 aa16.23■□□□□ 0.19
PRKCSH-218ENST00000593053 TBC1D8O95759 1140 aa16.23■□□□□ 0.19
PRKCSH-218ENST00000593053 PRDX5P30044 214 aa16.23■□□□□ 0.19
PRKCSH-218ENST00000593053 TIMM10P62072 90 aa16.23■□□□□ 0.19
PRKCSH-218ENST00000593053 CCDC102BQ68D86 513 aa16.23■□□□□ 0.19
PRKCSH-218ENST00000593053 HHIPL2Q6UWX4 724 aa16.23■□□□□ 0.19
PRKCSH-218ENST00000593053 ANKRD13AQ8IZ07 590 aa16.23■□□□□ 0.19
PRKCSH-218ENST00000593053 WNK4Q96J92 1243 aa16.23■□□□□ 0.19
PRKCSH-218ENST00000593053 DENND2AQ9ULE3 1009 aa16.23■□□□□ 0.19
PRKCSH-218ENST00000593053 ECM29Q5VYK3 1845 aa16.22■□□□□ 0.19
PRKCSH-218ENST00000593053 PNMA6EA0A0J9YXQ4 647 aa16.22■□□□□ 0.19
PRKCSH-218ENST00000593053 A0A1B0GUL7 405 aa16.22■□□□□ 0.19
PRKCSH-218ENST00000593053 SEMA3EO15041 775 aa16.22■□□□□ 0.19
PRKCSH-218ENST00000593053 LDHBP07195 334 aaKnown RBP16.22■□□□□ 0.19
PRKCSH-218ENST00000593053 ZBTB48P10074 688 aaPredicted RBP16.22■□□□□ 0.19
PRKCSH-218ENST00000593053 DIXDC1Q155Q3 683 aa16.22■□□□□ 0.19
PRKCSH-218ENST00000593053 FTSJ3Q8IY81 847 aaKnown RBP16.22■□□□□ 0.19
PRKCSH-218ENST00000593053 AKAP2Q9Y2D5 859 aa16.22■□□□□ 0.19
PRKCSH-218ENST00000593053 DAGLAQ9Y4D2 1042 aa16.22■□□□□ 0.19
PRKCSH-218ENST00000593053 MANSC4A6NHS7 340 aaPredicted RBP16.21■□□□□ 0.19
PRKCSH-218ENST00000593053 CCDC85CA6NKD9 419 aa16.21■□□□□ 0.19
PRKCSH-218ENST00000593053 XAGE2Q96GT9 111 aa16.21■□□□□ 0.19
PRKCSH-218ENST00000593053 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.21■□□□□ 0.19
PRKCSH-218ENST00000593053 SALL1Q9NSC2 1324 aa16.2■□□□□ 0.18
PRKCSH-218ENST00000593053 CASP8AP2Q9UKL3 1982 aa16.2■□□□□ 0.18
PRKCSH-218ENST00000593053 GJA5P36382 358 aa16.2■□□□□ 0.18
PRKCSH-218ENST00000593053 G3BP1Q13283 466 aaKnown RBP eCLIP16.2■□□□□ 0.18
PRKCSH-218ENST00000593053 RASGRF1Q13972 1273 aa16.2■□□□□ 0.18
PRKCSH-218ENST00000593053 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
PRKCSH-218ENST00000593053 FKBP1CQ5VVH2 108 aa16.2■□□□□ 0.18
PRKCSH-218ENST00000593053 FAM83AQ86UY5 434 aa16.2■□□□□ 0.18
PRKCSH-218ENST00000593053 ITPRIPQ8IWB1 547 aa16.2■□□□□ 0.18
PRKCSH-218ENST00000593053 NEUROD6Q96NK8 337 aa16.2■□□□□ 0.18
PRKCSH-218ENST00000593053 ELP3Q9H9T3 547 aa16.2■□□□□ 0.18
PRKCSH-218ENST00000593053 RLBP1P12271 317 aa16.19■□□□□ 0.18
PRKCSH-218ENST00000593053 INHBEP58166 350 aa16.19■□□□□ 0.18
PRKCSH-218ENST00000593053 MAP3K9P80192 1104 aa16.19■□□□□ 0.18
PRKCSH-218ENST00000593053 CDC42EP5Q6NZY7 148 aa16.19■□□□□ 0.18
PRKCSH-218ENST00000593053 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-218ENST00000593053 IFNL1Q8IU54 200 aa16.19■□□□□ 0.18
PRKCSH-218ENST00000593053 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.19■□□□□ 0.18
PRKCSH-218ENST00000593053 ZNF296Q8WUU4 475 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-218ENST00000593053 GPR25O00155 361 aa16.18■□□□□ 0.18
PRKCSH-218ENST00000593053 ZBTB22O15209 634 aa16.18■□□□□ 0.18
PRKCSH-218ENST00000593053 ALDH1A1P00352 501 aa16.18■□□□□ 0.18
PRKCSH-218ENST00000593053 VGLL4Q14135 290 aa16.18■□□□□ 0.18
PRKCSH-218ENST00000593053 CTU1Q7Z7A3 348 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-218ENST00000593053 ZGPATQ8N5A5 531 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-218ENST00000593053 OPTNQ96CV9 577 aa16.18■□□□□ 0.18
PRKCSH-218ENST00000593053 R3HDMLQ9H3Y0 253 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms