RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 SERPINA10Q9UK55 444 aa18.23■□□□□ 0.51
DDX39A-221ENST00000593026 HDLBPQ00341 1268 aaKnown RBP18.22■□□□□ 0.51
DDX39A-221ENST00000593026 CFAP100Q494V2 611 aa18.22■□□□□ 0.51
DDX39A-221ENST00000593026 TBC1D9Q6ZT07 1266 aa18.22■□□□□ 0.51
DDX39A-221ENST00000593026 DZIP1Q86YF9 867 aaKnown RBP18.22■□□□□ 0.51
DDX39A-221ENST00000593026 ZC3H15Q8WU90 426 aaKnown RBP18.22■□□□□ 0.51
DDX39A-221ENST00000593026 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.22■□□□□ 0.51
DDX39A-221ENST00000593026 ECHDC1Q9NTX5 307 aa18.22■□□□□ 0.51
DDX39A-221ENST00000593026 WNT10BO00744 389 aa18.21■□□□□ 0.51
DDX39A-221ENST00000593026 CYP2E1P05181 493 aaPredicted RBP18.21■□□□□ 0.51
DDX39A-221ENST00000593026 ATP5JP18859 108 aa18.21■□□□□ 0.51
DDX39A-221ENST00000593026 CRKP46108 304 aa18.21■□□□□ 0.51
DDX39A-221ENST00000593026 ERICH6Q7L0X2 663 aa18.21■□□□□ 0.51
DDX39A-221ENST00000593026 MTMR14Q8NCE2 650 aa18.21■□□□□ 0.51
DDX39A-221ENST00000593026 TEKT1Q969V4 418 aa18.21■□□□□ 0.51
DDX39A-221ENST00000593026 LRP2BPQ9P2M1 347 aa18.21■□□□□ 0.51
DDX39A-221ENST00000593026 NUCB1Q02818 461 aa18.2■□□□□ 0.5
DDX39A-221ENST00000593026 NBPF9Q3BBW0 867 aa18.2■□□□□ 0.5
DDX39A-221ENST00000593026 MAP1SQ66K74 1059 aaPredicted RBP18.2■□□□□ 0.5
DDX39A-221ENST00000593026 CHD1LQ86WJ1 897 aa18.2■□□□□ 0.5
DDX39A-221ENST00000593026 MRIQ9BWK5 157 aa18.2■□□□□ 0.5
DDX39A-221ENST00000593026 LNPKQ9C0E8 428 aa18.2■□□□□ 0.5
DDX39A-221ENST00000593026 GGA3Q9NZ52 723 aa18.2■□□□□ 0.5
DDX39A-221ENST00000593026 RAI14Q9P0K7 980 aa18.2■□□□□ 0.5
DDX39A-221ENST00000593026 PGAP2Q9UHJ9 254 aa18.2■□□□□ 0.5
DDX39A-221ENST00000593026 NDUFB9Q9Y6M9 179 aa18.2■□□□□ 0.5
DDX39A-221ENST00000593026 ASTN2O75129 1339 aaPredicted RBP18.2■□□□□ 0.5
DDX39A-221ENST00000593026 SPDYE2BA6NHP3 402 aa18.19■□□□□ 0.5
DDX39A-221ENST00000593026 SPDYE6P0CI01 402 aa18.19■□□□□ 0.5
DDX39A-221ENST00000593026 MX1P20591 662 aa18.19■□□□□ 0.5
DDX39A-221ENST00000593026 HHIPL2Q6UWX4 724 aa18.19■□□□□ 0.5
DDX39A-221ENST00000593026 OTUD7AQ8TE49 926 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-221ENST00000593026 DCPSQ96C86 337 aaKnown RBP18.19■□□□□ 0.5
DDX39A-221ENST00000593026 ZBED3Q96IU2 234 aaPredicted RBP18.19■□□□□ 0.5
DDX39A-221ENST00000593026 DNAJC2Q99543 621 aaKnown RBP18.19■□□□□ 0.5
DDX39A-221ENST00000593026 BOLA2Q9H3K6 86 aa18.19■□□□□ 0.5
DDX39A-221ENST00000593026 PCDHAC2Q9Y5I4 1007 aa18.19■□□□□ 0.5
DDX39A-221ENST00000593026 TTC41PQ6P2S7 1318 aa18.19■□□□□ 0.5
DDX39A-221ENST00000593026 MYO1BO43795 1136 aa18.18■□□□□ 0.5
DDX39A-221ENST00000593026 APLP1P51693 650 aa18.18■□□□□ 0.5
DDX39A-221ENST00000593026 MECOMQ03112 1051 aa18.18■□□□□ 0.5
DDX39A-221ENST00000593026 DIXDC1Q155Q3 683 aa18.18■□□□□ 0.5
DDX39A-221ENST00000593026 ANGEL2Q5VTE6 544 aaKnown RBP18.18■□□□□ 0.5
DDX39A-221ENST00000593026 TSHZ3Q63HK5 1081 aa18.18■□□□□ 0.5
DDX39A-221ENST00000593026 SLF2Q8IX21 1173 aa18.18■□□□□ 0.5
DDX39A-221ENST00000593026 CNTROBQ8N137 903 aa18.18■□□□□ 0.5
DDX39A-221ENST00000593026 PRMT6Q96LA8 375 aaPredicted RBP18.18■□□□□ 0.5
DDX39A-221ENST00000593026 ZDHHC15Q96MV8 337 aa18.18■□□□□ 0.5
DDX39A-221ENST00000593026 HAUS7Q99871 368 aa18.18■□□□□ 0.5
DDX39A-221ENST00000593026 PIH1D3Q9NQM4 214 aaKnown RBP18.18■□□□□ 0.5
DDX39A-221ENST00000593026 MAST2Q6P0Q8 1798 aa18.17■□□□□ 0.5
DDX39A-221ENST00000593026 ECM29Q5VYK3 1845 aa18.17■□□□□ 0.5
DDX39A-221ENST00000593026 GOLIM4O00461 696 aa18.17■□□□□ 0.5
DDX39A-221ENST00000593026 ERC2O15083 957 aa18.17■□□□□ 0.5
DDX39A-221ENST00000593026 TTF1Q15361 905 aaPredicted RBP18.17■□□□□ 0.5
DDX39A-221ENST00000593026 ANTXR1Q9H6X2 564 aa18.17■□□□□ 0.5
DDX39A-221ENST00000593026 DAGLAQ9Y4D2 1042 aa18.17■□□□□ 0.5
DDX39A-221ENST00000593026 SALL3Q9BXA9 1300 aa18.17■□□□□ 0.5
DDX39A-221ENST00000593026 PITPNM2Q9BZ72 1349 aa18.17■□□□□ 0.5
DDX39A-221ENST00000593026 IGSF3O75054 1194 aa18.16■□□□□ 0.5
DDX39A-221ENST00000593026 IDH1O75874 414 aaKnown RBP18.16■□□□□ 0.5
DDX39A-221ENST00000593026 GSTO1P78417 241 aa18.16■□□□□ 0.5
DDX39A-221ENST00000593026 NSUN4Q96CB9 384 aaKnown RBP18.16■□□□□ 0.5
DDX39A-221ENST00000593026 PAG1Q9NWQ8 432 aa18.16■□□□□ 0.5
DDX39A-221ENST00000593026 DOCK2Q92608 1830 aa18.16■□□□□ 0.5
DDX39A-221ENST00000593026 MYH2Q9UKX2 1941 aa18.15■□□□□ 0.5
DDX39A-221ENST00000593026 CLRN2A0PK11 232 aa18.15■□□□□ 0.5
DDX39A-221ENST00000593026 GLRX3O76003 335 aaKnown RBP18.15■□□□□ 0.5
DDX39A-221ENST00000593026 CDC37L1Q7L3B6 337 aa18.15■□□□□ 0.5
DDX39A-221ENST00000593026 KRT26Q7Z3Y9 468 aa18.15■□□□□ 0.5
DDX39A-221ENST00000593026 SULF1Q8IWU6 871 aa18.15■□□□□ 0.5
DDX39A-221ENST00000593026 EDC3Q96F86 508 aaKnown RBP18.15■□□□□ 0.5
DDX39A-221ENST00000593026 GLIS2Q9BZE0 524 aaPredicted RBP18.15■□□□□ 0.5
DDX39A-221ENST00000593026 TDRD3Q9H7E2 651 aaKnown RBP18.15■□□□□ 0.5
DDX39A-221ENST00000593026 MYO5AQ9Y4I1 1855 aaKnown RBP18.15■□□□□ 0.5
DDX39A-221ENST00000593026 MROH7-TTC4A0A0A0MT08 1334 aa18.15■□□□□ 0.5
DDX39A-221ENST00000593026 ITGBL1O95965 494 aaPredicted RBP18.14■□□□□ 0.49
DDX39A-221ENST00000593026 LDHCP07864 332 aa18.14■□□□□ 0.49
DDX39A-221ENST00000593026 PDE1AP54750 535 aa18.14■□□□□ 0.49
DDX39A-221ENST00000593026 MAP3K12Q12852 859 aa18.14■□□□□ 0.49
DDX39A-221ENST00000593026 ERICH6BQ5W0A0 696 aa18.14■□□□□ 0.49
DDX39A-221ENST00000593026 NAA16Q6N069 864 aaPredicted RBP18.14■□□□□ 0.49
DDX39A-221ENST00000593026 APOBEC3HQ6NTF7 200 aaKnown RBP18.14■□□□□ 0.49
DDX39A-221ENST00000593026 CENPQQ7L2Z9 268 aaPredicted RBP18.14■□□□□ 0.49
DDX39A-221ENST00000593026 APOBEC3FQ8IUX4 373 aaKnown RBP18.14■□□□□ 0.49
DDX39A-221ENST00000593026 PI4K2BQ8TCG2 481 aa18.14■□□□□ 0.49
DDX39A-221ENST00000593026 ZNF384Q8TF68 577 aa18.14■□□□□ 0.49
DDX39A-221ENST00000593026 FAM163AQ96GL9 167 aaPredicted RBP18.14■□□□□ 0.49
DDX39A-221ENST00000593026 CCDC136Q96JN2 1154 aa18.14■□□□□ 0.49
DDX39A-221ENST00000593026 STAP2Q9UGK3 403 aa18.14■□□□□ 0.49
DDX39A-221ENST00000593026 GAKO14976 1311 aa18.14■□□□□ 0.49
DDX39A-221ENST00000593026 AOX1Q06278 1338 aa18.14■□□□□ 0.49
DDX39A-221ENST00000593026 ADM5C9JUS6 153 aa18.13■□□□□ 0.49
DDX39A-221ENST00000593026 SPDYE2Q495Y8 402 aa18.13■□□□□ 0.49
DDX39A-221ENST00000593026 USP48Q86UV5 1035 aa18.13■□□□□ 0.49
DDX39A-221ENST00000593026 VEZTQ9HBM0 779 aa18.13■□□□□ 0.49
DDX39A-221ENST00000593026 TMOD2Q9NZR1 351 aa18.13■□□□□ 0.49
DDX39A-221ENST00000593026 ZNF70Q9UC06 446 aaPredicted RBP18.13■□□□□ 0.49
DDX39A-221ENST00000593026 POLR2AP24928 1970 aaKnown RBP18.12■□□□□ 0.49
DDX39A-221ENST00000593026 TRAF5O00463 557 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms