RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 ABCD1P33897 745 aa14.02□□□□□ -0.16
SMARCA4-217ENST00000591595 PDCD2Q16342 344 aaPredicted RBP14.02□□□□□ -0.16
SMARCA4-217ENST00000591595 RINLQ6ZS11 566 aa14.02□□□□□ -0.16
SMARCA4-217ENST00000591595 TTC6Q86TZ1 520 aa14.02□□□□□ -0.16
SMARCA4-217ENST00000591595 RPUSD2Q8IZ73 545 aaKnown RBP14.02□□□□□ -0.16
SMARCA4-217ENST00000591595 TBX22Q9Y458 520 aa14.02□□□□□ -0.16
SMARCA4-217ENST00000591595 NEFHP12036 1026 aa14.02□□□□□ -0.17
SMARCA4-217ENST00000591595 ARID5BQ14865 1188 aa14.02□□□□□ -0.17
SMARCA4-217ENST00000591595 PROSER3Q2NL68 480 aa14.02□□□□□ -0.17
SMARCA4-217ENST00000591595 TSHZ1Q6ZSZ6 1077 aa14.02□□□□□ -0.17
SMARCA4-217ENST00000591595 PARD3BQ8TEW8 1205 aa14.02□□□□□ -0.17
SMARCA4-217ENST00000591595 CABS1Q96KC9 395 aa14.02□□□□□ -0.17
SMARCA4-217ENST00000591595 PXDNLA1KZ92 1463 aa14.02□□□□□ -0.17
SMARCA4-217ENST00000591595 PPFIA2O75334 1257 aa14.02□□□□□ -0.17
SMARCA4-217ENST00000591595 MRPL12P52815 198 aaKnown RBP14.02□□□□□ -0.17
SMARCA4-217ENST00000591595 TMTC2Q8N394 836 aa14.02□□□□□ -0.17
SMARCA4-217ENST00000591595 SPATA32Q96LK8 384 aa14.02□□□□□ -0.17
SMARCA4-217ENST00000591595 TM6SF1Q9BZW5 370 aa14.02□□□□□ -0.17
SMARCA4-217ENST00000591595 A0A1B0GUA9 196 aa14.01□□□□□ -0.17
SMARCA4-217ENST00000591595 HIP1O00291 1037 aa14.01□□□□□ -0.17
SMARCA4-217ENST00000591595 TADA3O75528 432 aa14.01□□□□□ -0.17
SMARCA4-217ENST00000591595 PSME1Q06323 249 aa14.01□□□□□ -0.17
SMARCA4-217ENST00000591595 DDR1Q08345 913 aa14.01□□□□□ -0.17
SMARCA4-217ENST00000591595 NECTIN1Q15223 517 aa14.01□□□□□ -0.17
SMARCA4-217ENST00000591595 ZKSCAN4Q969J2 545 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-217ENST00000591595 DACT1Q9NYF0 836 aa14.01□□□□□ -0.17
SMARCA4-217ENST00000591595 RGPD1P0DJD0 1748 aa14.01□□□□□ -0.17
SMARCA4-217ENST00000591595 HOXB7P09629 217 aa14.01□□□□□ -0.17
SMARCA4-217ENST00000591595 PREPLQ4J6C6 727 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-217ENST00000591595 TMCO5BA8MYB1 307 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 EXOC5O00471 708 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 SLC5A9Q2M3M2 681 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 KSR2Q6VAB6 950 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 RIC3Q7Z5B4 369 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 KLHDC4Q8TBB5 520 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 EAF2Q96CJ1 260 aaPredicted RBP14□□□□□ -0.17
SMARCA4-217ENST00000591595 KIF9Q9HAQ2 790 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 EFCAB8A8MWE9 144 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 SLC27A2O14975 620 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 CHUKO15111 745 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 SNX1Q13596 522 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 DHX8Q14562 1220 aaKnown RBP14□□□□□ -0.17
SMARCA4-217ENST00000591595 IP6K1Q92551 441 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 ZNF232Q9UNY5 417 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 PHF8Q9UPP1 1060 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 PRAMEF22A3QJZ6 481 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 ALDH1L1O75891 902 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 DDX58O95786 925 aaKnown RBP14□□□□□ -0.17
SMARCA4-217ENST00000591595 TYRO3Q06418 890 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 SKIDA1Q1XH10 827 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 IQCA1Q86XH1 822 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 EPC1Q9H2F5 836 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 BICC1Q9H694 974 aaKnown RBP14□□□□□ -0.17
SMARCA4-217ENST00000591595 PDE11AQ9HCR9 933 aa14□□□□□ -0.17
SMARCA4-217ENST00000591595 ADCY9O60503 1353 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 A0A0D9SFI3 127 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 H3BQV1 296 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 GRM8O00222 908 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 POLD1P28340 1107 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 FOSBP53539 338 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 CLNS1AP54105 237 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 EVCP57679 992 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 CEBPZQ03701 1054 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 ANKRD1Q15327 319 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 IFFO2Q5TF58 517 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 DRAXINQ8NBI3 349 aaPredicted RBP13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 SYTL4Q96C24 671 aaPredicted RBP13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 CD248Q9HCU0 757 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 FAN1Q9Y2M0 1017 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 APOBRQ0VD83 1088 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 SUCLG2Q96I99 432 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 SCAND2PQ9GZW5 306 aaPredicted RBP13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 CHCHD3Q9NX63 227 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 TLR7Q9NYK1 1049 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 SETSIPP0DME0 302 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 ST3GAL1Q11201 340 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 ANO6Q4KMQ2 910 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 AKAP4Q5JQC9 854 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 LARP1Q6PKG0 1096 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 THEMISQ8N1K5 641 aaPredicted RBP13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 CBX8Q9HC52 389 aa13.99□□□□□ -0.17
SMARCA4-217ENST00000591595 FRMD3A2A2Y4 597 aa13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 CCDC69A6NI79 296 aa13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 MYL6BP14649 208 aa13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 PECAM1P16284 738 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 NAP1L1P55209 391 aaKnown RBP13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 COL9A3Q14050 684 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 ESCO1Q5FWF5 840 aa13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 CNNM3Q8NE01 707 aa13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 MAP4K1Q92918 833 aa13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 ZBTB10Q96DT7 871 aa13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 KCND1Q9NSA2 647 aa13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 DIP2BQ9P265 1576 aa13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 SKAP2O75563 359 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 CCZ1BP86790 482 aa13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 CCZ1P86791 482 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 MTX1Q13505 466 aa13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 EDC3Q96F86 508 aaKnown RBP13.98□□□□□ -0.17
SMARCA4-217ENST00000591595 CRACR2AQ9BSW2 395 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms