RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM7-206	ENST00000591515	GTF2I	P78347	998 aa		28.8	■■■□□ 2.2
LSM7-206	ENST00000591515	CAP1	Q01518	475 aa		28.8	■■■□□ 2.2
LSM7-206	ENST00000591515	CRHR2	Q13324	411 aa		28.8	■■■□□ 2.2
LSM7-206	ENST00000591515	TRIOBP	Q9H2D6	2365 aa		28.8	■■■□□ 2.2
LSM7-206	ENST00000591515	ZNF804B	A4D1E1	1349 aa		28.79	■■■□□ 2.2
LSM7-206	ENST00000591515	KAZALD1	Q96I82	304 aa		28.79	■■■□□ 2.2
LSM7-206	ENST00000591515	LRRFIP2	Q9Y608	721 aa	Known RBP	28.79	■■■□□ 2.2
LSM7-206	ENST00000591515	GJA5	P36382	358 aa		28.78	■■■□□ 2.2
LSM7-206	ENST00000591515	RRP1	P56182	461 aa	Known RBP	28.78	■■■□□ 2.2
LSM7-206	ENST00000591515	MVP	Q14764	893 aa	Known RBP	28.78	■■■□□ 2.2
LSM7-206	ENST00000591515	EFCC1	Q9HA90	598 aa		28.77	■■■□□ 2.2
LSM7-206	ENST00000591515	PCDHAC2	Q9Y5I4	1007 aa		28.77	■■■□□ 2.2
LSM7-206	ENST00000591515	PPP1R12B	O60237	982 aa	Predicted RBP	28.76	■■■□□ 2.19
LSM7-206	ENST00000591515	DLGAP5	Q15398	846 aa		28.76	■■■□□ 2.19
LSM7-206	ENST00000591515	CERS5	Q8N5B7	392 aa		28.76	■■■□□ 2.19
LSM7-206	ENST00000591515	ANKRD44	Q8N8A2	993 aa		28.76	■■■□□ 2.19
LSM7-206	ENST00000591515	PPP2R3B	Q9Y5P8	575 aa		28.76	■■■□□ 2.19
LSM7-206	ENST00000591515	ZBTB7B	O15156	539 aa	Predicted RBP	28.74	■■■□□ 2.19
LSM7-206	ENST00000591515	MTMR14	Q8NCE2	650 aa		28.74	■■■□□ 2.19
LSM7-206	ENST00000591515	PTPN18	Q99952	460 aa		28.74	■■■□□ 2.19
LSM7-206	ENST00000591515	ANKRD2	Q9GZV1	360 aa		28.74	■■■□□ 2.19
LSM7-206	ENST00000591515	COG6	Q9Y2V7	657 aa		28.74	■■■□□ 2.19
LSM7-206	ENST00000591515	SZT2	Q5T011	3432 aa		28.73	■■■□□ 2.19
LSM7-206	ENST00000591515	UNCX	A6NJT0	531 aa		28.73	■■■□□ 2.19
LSM7-206	ENST00000591515	SP3	Q02447	781 aa		28.73	■■■□□ 2.19
LSM7-206	ENST00000591515	CNNM1	Q9NRU3	951 aa		28.73	■■■□□ 2.19
LSM7-206	ENST00000591515	AOX1	Q06278	1338 aa		28.72	■■■□□ 2.19
LSM7-206	ENST00000591515	ZSWIM8	A7E2V4	1837 aa		28.72	■■■□□ 2.19
LSM7-206	ENST00000591515	CLRN2	A0PK11	232 aa		28.72	■■■□□ 2.19
LSM7-206	ENST00000591515	NBPF12	Q5TAG4	269 aa	Predicted RBP	28.72	■■■□□ 2.19
LSM7-206	ENST00000591515	OTUD7B	Q6GQQ9	843 aa		28.72	■■■□□ 2.19
LSM7-206	ENST00000591515	LDHAL6A	Q6ZMR3	332 aa		28.72	■■■□□ 2.19
LSM7-206	ENST00000591515	ZNF333	Q96JL9	665 aa		28.72	■■■□□ 2.19
LSM7-206	ENST00000591515	CD209	Q9NNX6	404 aa		28.72	■■■□□ 2.19
LSM7-206	ENST00000591515	COLQ	Q9Y215	455 aa	Predicted RBP	28.72	■■■□□ 2.19
LSM7-206	ENST00000591515	IRS2	Q9Y4H2	1338 aa		28.7	■■■□□ 2.19
LSM7-206	ENST00000591515	TESPA1	A2RU30	521 aa	Predicted RBP	28.7	■■■□□ 2.18
LSM7-206	ENST00000591515	SUPT20HL1	Q3ZLR7	823 aa		28.7	■■■□□ 2.18
LSM7-206	ENST00000591515	USP2	O75604	605 aa	Predicted RBP	28.69	■■■□□ 2.18
LSM7-206	ENST00000591515	IREB2	P48200	963 aa	Known RBP	28.69	■■■□□ 2.18
LSM7-206	ENST00000591515	MTX1	Q13505	466 aa		28.69	■■■□□ 2.18
LSM7-206	ENST00000591515	CFAP100	Q494V2	611 aa		28.69	■■■□□ 2.18
LSM7-206	ENST00000591515	TMEM106C	Q9BVX2	250 aa		28.69	■■■□□ 2.18
LSM7-206	ENST00000591515	FBXO3	Q9UK99	471 aa		28.69	■■■□□ 2.18
LSM7-206	ENST00000591515	SPDYE2B	A6NHP3	402 aa		28.68	■■■□□ 2.18
LSM7-206	ENST00000591515	SNAP23	O00161	211 aa		28.68	■■■□□ 2.18
LSM7-206	ENST00000591515	SPDYE6	P0CI01	402 aa		28.68	■■■□□ 2.18
LSM7-206	ENST00000591515	CHRND	Q07001	517 aa		28.68	■■■□□ 2.18
LSM7-206	ENST00000591515	PRMT6	Q96LA8	375 aa	Predicted RBP	28.68	■■■□□ 2.18
LSM7-206	ENST00000591515	VEZT	Q9HBM0	779 aa		28.68	■■■□□ 2.18
LSM7-206	ENST00000591515		F8W031	263 aa	Predicted RBP	28.67	■■■□□ 2.18
LSM7-206	ENST00000591515	SRGAP3	O43295	1099 aa		28.67	■■■□□ 2.18
LSM7-206	ENST00000591515	KCNJ4	P48050	445 aa		28.67	■■■□□ 2.18
LSM7-206	ENST00000591515	ANKRD13A	Q8IZ07	590 aa		28.67	■■■□□ 2.18
LSM7-206	ENST00000591515	MYO1B	O43795	1136 aa		28.66	■■■□□ 2.18
LSM7-206	ENST00000591515	C20orf194	Q5TEA3	1177 aa		28.66	■■■□□ 2.18
LSM7-206	ENST00000591515	ZNF594	Q96JF6	807 aa	Predicted RBP	28.66	■■■□□ 2.18
LSM7-206	ENST00000591515	PTCH2	Q9Y6C5	1203 aa		28.66	■■■□□ 2.18
LSM7-206	ENST00000591515	MROH5	Q6ZUA9	1318 aa		28.66	■■■□□ 2.18
LSM7-206	ENST00000591515	ARAP2	Q8WZ64	1704 aa		28.66	■■■□□ 2.18
LSM7-206	ENST00000591515	RASA3	Q14644	834 aa		28.64	■■■□□ 2.18
LSM7-206	ENST00000591515	OPTN	Q96CV9	577 aa		28.64	■■■□□ 2.18
LSM7-206	ENST00000591515	MS4A4A	Q96JQ5	239 aa		28.64	■■■□□ 2.18
LSM7-206	ENST00000591515	ELP3	Q9H9T3	547 aa		28.64	■■■□□ 2.18
LSM7-206	ENST00000591515	SLC9C1	Q4G0N8	1177 aa		28.63	■■■□□ 2.17
LSM7-206	ENST00000591515	C15orf52	Q6ZUT6	534 aa	Known RBP	28.63	■■■□□ 2.17
LSM7-206	ENST00000591515	EYA2	O00167	538 aa		28.62	■■■□□ 2.17
LSM7-206	ENST00000591515	TAF5L	O75529	589 aa		28.62	■■■□□ 2.17
LSM7-206	ENST00000591515	RFX5	P48382	616 aa	Predicted RBP	28.62	■■■□□ 2.17
LSM7-206	ENST00000591515	ATP8B2	P98198	1209 aa		28.62	■■■□□ 2.17
LSM7-206	ENST00000591515	BRI3BP	Q8WY22	251 aa		28.62	■■■□□ 2.17
LSM7-206	ENST00000591515	COPRS	Q9NQ92	184 aa		28.62	■■■□□ 2.17
LSM7-206	ENST00000591515	ZBTB40	Q9NUA8	1239 aa		28.62	■■■□□ 2.17
LSM7-206	ENST00000591515	CIAO1	O76071	339 aa		28.61	■■■□□ 2.17
LSM7-206	ENST00000591515	IL1R1	P14778	569 aa		28.61	■■■□□ 2.17
LSM7-206	ENST00000591515	CNKSR2	Q8WXI2	1034 aa		28.61	■■■□□ 2.17
LSM7-206	ENST00000591515	C1orf115	Q9H7X2	142 aa		28.61	■■■□□ 2.17
LSM7-206	ENST00000591515	JAG2	Q9Y219	1238 aa		28.61	■■■□□ 2.17
LSM7-206	ENST00000591515		H0YGN5	161 aa		28.6	■■■□□ 2.17
LSM7-206	ENST00000591515	FKBP1A	P62942	108 aa	Known RBP	28.6	■■■□□ 2.17
LSM7-206	ENST00000591515	TAF1C	Q15572	869 aa	Predicted RBP	28.6	■■■□□ 2.17
LSM7-206	ENST00000591515	SLC4A8	Q2Y0W8	1093 aa		28.6	■■■□□ 2.17
LSM7-206	ENST00000591515	METTL24	Q5JXM2	366 aa		28.6	■■■□□ 2.17
LSM7-206	ENST00000591515	NBPF11	Q86T75	865 aa		28.6	■■■□□ 2.17
LSM7-206	ENST00000591515	RPAP2	Q8IXW5	612 aa	Predicted RBP	28.6	■■■□□ 2.17
LSM7-206	ENST00000591515	HELB	Q8NG08	1087 aa	Predicted RBP	28.6	■■■□□ 2.17
LSM7-206	ENST00000591515	SUPT16H	Q9Y5B9	1047 aa	Known RBP	28.6	■■■□□ 2.17
LSM7-206	ENST00000591515	HMMR	O75330	724 aa		28.59	■■■□□ 2.17
LSM7-206	ENST00000591515	CDAN1	Q8IWY9	1227 aa		28.59	■■■□□ 2.17
LSM7-206	ENST00000591515	OTUD5	Q96G74	571 aa		28.59	■■■□□ 2.17
LSM7-206	ENST00000591515	RIPOR2	Q9Y4F9	1068 aa		28.59	■■■□□ 2.17
LSM7-206	ENST00000591515	IL15	P40933	162 aa	Predicted RBP	28.58	■■■□□ 2.17
LSM7-206	ENST00000591515	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	28.58	■■■□□ 2.17
LSM7-206	ENST00000591515	KLHDC4	Q8TBB5	520 aa		28.58	■■■□□ 2.17
LSM7-206	ENST00000591515	CCL15-CCL14	A0A0B4J2E2	113 aa		28.57	■■■□□ 2.16
LSM7-206	ENST00000591515	MYC	P01106	439 aa	Predicted RBP	28.57	■■■□□ 2.16
LSM7-206	ENST00000591515	RBM5	P52756	815 aa	Known RBP eCLIP	28.57	■■■□□ 2.16
LSM7-206	ENST00000591515	AAMP	Q13685	434 aa		28.57	■■■□□ 2.16
LSM7-206	ENST00000591515	CCL15	Q16663	113 aa		28.57	■■■□□ 2.16
LSM7-206	ENST00000591515	ZNF804A	Q7Z570	1209 aa		28.57	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms