RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 AOX1Q06278 1338 aa22.27■■□□□ 1.16
CROCCP3-205ENST00000591316 RBM5P52756 815 aaKnown RBP eCLIP22.27■■□□□ 1.16
CROCCP3-205ENST00000591316 DZIP1Q86YF9 867 aaKnown RBP22.27■■□□□ 1.16
CROCCP3-205ENST00000591316 SUGT1Q9Y2Z0 365 aa22.27■■□□□ 1.16
CROCCP3-205ENST00000591316 AKAP11Q9UKA4 1901 aa22.26■■□□□ 1.15
CROCCP3-205ENST00000591316 MECOMQ03112 1051 aa22.26■■□□□ 1.15
CROCCP3-205ENST00000591316 SAMD7Q7Z3H4 446 aa22.26■■□□□ 1.15
CROCCP3-205ENST00000591316 MAP3K12Q12852 859 aa22.25■■□□□ 1.15
CROCCP3-205ENST00000591316 DIXDC1Q155Q3 683 aa22.25■■□□□ 1.15
CROCCP3-205ENST00000591316 TTC22Q5TAA0 569 aa22.25■■□□□ 1.15
CROCCP3-205ENST00000591316 MYH13Q9UKX3 1938 aa22.25■■□□□ 1.15
CROCCP3-205ENST00000591316 POTECB2RU33 542 aa22.25■■□□□ 1.15
CROCCP3-205ENST00000591316 TBC1D10BQ4KMP7 808 aaPredicted RBP22.25■■□□□ 1.15
CROCCP3-205ENST00000591316 L3MBTL3Q96JM7 780 aaPredicted RBP22.25■■□□□ 1.15
CROCCP3-205ENST00000591316 HACL1Q9UJ83 578 aa22.25■■□□□ 1.15
CROCCP3-205ENST00000591316 PCDHAC2Q9Y5I4 1007 aa22.25■■□□□ 1.15
CROCCP3-205ENST00000591316 SLC9C2Q5TAH2 1124 aa22.24■■□□□ 1.15
CROCCP3-205ENST00000591316 MAGEB6Q8N7X4 407 aa22.24■■□□□ 1.15
CROCCP3-205ENST00000591316 NSUN4Q96CB9 384 aaKnown RBP22.24■■□□□ 1.15
CROCCP3-205ENST00000591316 EVI5LQ96CN4 794 aa22.24■■□□□ 1.15
CROCCP3-205ENST00000591316 NMRK2Q9NPI5 230 aa22.24■■□□□ 1.15
CROCCP3-205ENST00000591316 CHGBP05060 677 aa22.23■■□□□ 1.15
CROCCP3-205ENST00000591316 GSPT1P15170 499 aaKnown RBP22.23■■□□□ 1.15
CROCCP3-205ENST00000591316 CRKP46108 304 aa22.23■■□□□ 1.15
CROCCP3-205ENST00000591316 CFAP100Q494V2 611 aa22.23■■□□□ 1.15
CROCCP3-205ENST00000591316 SLFNL1Q499Z3 407 aa22.23■■□□□ 1.15
CROCCP3-205ENST00000591316 NAA16Q6N069 864 aaPredicted RBP22.23■■□□□ 1.15
CROCCP3-205ENST00000591316 CNTROBQ8N137 903 aa22.23■■□□□ 1.15
CROCCP3-205ENST00000591316 KBTBD3Q8NAB2 608 aa22.23■■□□□ 1.15
CROCCP3-205ENST00000591316 FSD1Q9BTV5 496 aa22.23■■□□□ 1.15
CROCCP3-205ENST00000591316 MYOZ2Q9NPC6 264 aa22.23■■□□□ 1.15
CROCCP3-205ENST00000591316 IQCA1LA6NCM1 817 aa22.22■■□□□ 1.15
CROCCP3-205ENST00000591316 EGFRP00533 1210 aa22.22■■□□□ 1.15
CROCCP3-205ENST00000591316 VEGFAP15692 232 aaPredicted RBP22.22■■□□□ 1.15
CROCCP3-205ENST00000591316 EPHX2P34913 555 aa22.22■■□□□ 1.15
CROCCP3-205ENST00000591316 ZNF280AP59817 542 aaPredicted RBP22.22■■□□□ 1.15
CROCCP3-205ENST00000591316 ZNF384Q8TF68 577 aa22.22■■□□□ 1.15
CROCCP3-205ENST00000591316 TEKT1Q969V4 418 aa22.22■■□□□ 1.15
CROCCP3-205ENST00000591316 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.22■■□□□ 1.15
CROCCP3-205ENST00000591316 MAST3O60307 1309 aa22.22■■□□□ 1.15
CROCCP3-205ENST00000591316 CYP7A1P22680 504 aa22.21■■□□□ 1.15
CROCCP3-205ENST00000591316 DLGAP5Q15398 846 aa22.21■■□□□ 1.15
CROCCP3-205ENST00000591316 GPBP1L1Q9HC44 474 aaPredicted RBP22.21■■□□□ 1.15
CROCCP3-205ENST00000591316 PSME4Q14997 1843 aa22.21■■□□□ 1.15
CROCCP3-205ENST00000591316 SDSP20132 328 aa22.21■■□□□ 1.15
CROCCP3-205ENST00000591316 GSTO1P78417 241 aa22.21■■□□□ 1.15
CROCCP3-205ENST00000591316 EAPPQ56P03 285 aaPredicted RBP22.21■■□□□ 1.15
CROCCP3-205ENST00000591316 ADARB2Q9NS39 739 aaKnown RBP22.21■■□□□ 1.15
CROCCP3-205ENST00000591316 SERPINA10Q9UK55 444 aa22.21■■□□□ 1.15
CROCCP3-205ENST00000591316 LDHCP07864 332 aa22.2■■□□□ 1.14
CROCCP3-205ENST00000591316 PDE6AP16499 860 aa22.2■■□□□ 1.14
CROCCP3-205ENST00000591316 SLF2Q8IX21 1173 aa22.2■■□□□ 1.14
CROCCP3-205ENST00000591316 TRPM4Q8TD43 1214 aa22.2■■□□□ 1.14
CROCCP3-205ENST00000591316 PRMT6Q96LA8 375 aaPredicted RBP22.2■■□□□ 1.14
CROCCP3-205ENST00000591316 TAF1DQ9H5J8 278 aaPredicted RBP22.2■■□□□ 1.14
CROCCP3-205ENST00000591316 ZNF532Q9HCE3 1301 aa22.19■■□□□ 1.14
CROCCP3-205ENST00000591316 HDLBPQ00341 1268 aaKnown RBP22.19■■□□□ 1.14
CROCCP3-205ENST00000591316 KIF4BQ2VIQ3 1234 aa22.19■■□□□ 1.14
CROCCP3-205ENST00000591316 NBPF9Q3BBW0 867 aa22.19■■□□□ 1.14
CROCCP3-205ENST00000591316 HHIPL2Q6UWX4 724 aa22.19■■□□□ 1.14
CROCCP3-205ENST00000591316 MRIQ9BWK5 157 aa22.19■■□□□ 1.14
CROCCP3-205ENST00000591316 ZNF646O15015 1829 aaPredicted RBP22.19■■□□□ 1.14
CROCCP3-205ENST00000591316 ADD2P35612 726 aa22.18■■□□□ 1.14
CROCCP3-205ENST00000591316 HIRAP54198 1017 aaPredicted RBP22.18■■□□□ 1.14
CROCCP3-205ENST00000591316 ZSCAN25Q6NSZ9 544 aa22.18■■□□□ 1.14
CROCCP3-205ENST00000591316 ADGRA1Q86SQ6 560 aa22.18■■□□□ 1.14
CROCCP3-205ENST00000591316 DAGLAQ9Y4D2 1042 aa22.18■■□□□ 1.14
CROCCP3-205ENST00000591316 WNT10BO00744 389 aa22.17■■□□□ 1.14
CROCCP3-205ENST00000591316 MMP14P50281 582 aa22.17■■□□□ 1.14
CROCCP3-205ENST00000591316 MIGA1Q8NAN2 632 aa22.17■■□□□ 1.14
CROCCP3-205ENST00000591316 RNF113AO15541 343 aaKnown RBP22.16■■□□□ 1.14
CROCCP3-205ENST00000591316 LRRFIP1Q32MZ4 808 aaKnown RBP22.16■■□□□ 1.14
CROCCP3-205ENST00000591316 APOBEC3HQ6NTF7 200 aaKnown RBP22.16■■□□□ 1.14
CROCCP3-205ENST00000591316 ZDHHC15Q96MV8 337 aa22.16■■□□□ 1.14
CROCCP3-205ENST00000591316 TDRD3Q9H7E2 651 aaKnown RBP22.16■■□□□ 1.14
CROCCP3-205ENST00000591316 AATFQ9NY61 560 aaKnown RBP eCLIP22.16■■□□□ 1.14
CROCCP3-205ENST00000591316 CLEC11AQ9Y240 323 aa22.16■■□□□ 1.14
CROCCP3-205ENST00000591316 MYO5AQ9Y4I1 1855 aaKnown RBP22.16■■□□□ 1.14
CROCCP3-205ENST00000591316 MROH7-TTC4A0A0A0MT08 1334 aa22.16■■□□□ 1.14
CROCCP3-205ENST00000591316 SPDYE2BA6NHP3 402 aa22.16■■□□□ 1.14
CROCCP3-205ENST00000591316 SPDYE6P0CI01 402 aa22.16■■□□□ 1.14
CROCCP3-205ENST00000591316 BTDP43251 543 aa22.16■■□□□ 1.14
CROCCP3-205ENST00000591316 USP50Q70EL3 339 aaPredicted RBP22.16■■□□□ 1.14
CROCCP3-205ENST00000591316 FAM163AQ96GL9 167 aaPredicted RBP22.16■■□□□ 1.14
CROCCP3-205ENST00000591316 TCRBV5S4A2TA0A5A2 114 aa22.15■■□□□ 1.14
CROCCP3-205ENST00000591316 CLRN2A0PK11 232 aa22.15■■□□□ 1.14
CROCCP3-205ENST00000591316 DYNLL1P63167 89 aaKnown RBP22.15■■□□□ 1.14
CROCCP3-205ENST00000591316 MTMR14Q8NCE2 650 aa22.15■■□□□ 1.14
CROCCP3-205ENST00000591316 NOL10Q9BSC4 688 aaKnown RBP22.15■■□□□ 1.14
CROCCP3-205ENST00000591316 ASTN2O75129 1339 aaPredicted RBP22.15■■□□□ 1.14
CROCCP3-205ENST00000591316 UBE3CQ15386 1083 aa22.14■■□□□ 1.13
CROCCP3-205ENST00000591316 BMP2KLQ5H9B9 411 aa22.14■■□□□ 1.13
CROCCP3-205ENST00000591316 PNMA8AQ86V59 439 aaPredicted RBP22.14■■□□□ 1.13
CROCCP3-205ENST00000591316 ZNF784Q8NCA9 323 aaPredicted RBP22.14■■□□□ 1.13
CROCCP3-205ENST00000591316 USP40Q9NVE5 1235 aa22.14■■□□□ 1.13
CROCCP3-205ENST00000591316 SCAF8Q9UPN6 1271 aaKnown RBP22.14■■□□□ 1.13
CROCCP3-205ENST00000591316 WDR90Q96KV7 1748 aa22.14■■□□□ 1.13
CROCCP3-205ENST00000591316 GAKO14976 1311 aa22.14■■□□□ 1.13
CROCCP3-205ENST00000591316 GPR75-ASB3A0A0A6YYF3 556 aa22.13■■□□□ 1.13
CROCCP3-205ENST00000591316 MYO1BO43795 1136 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms