RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 CCL15Q16663 113 aa20.19■□□□□ 0.82
DDX39A-216ENST00000591275 DZIP1LQ8IYY4 767 aaKnown RBP20.19■□□□□ 0.82
DDX39A-216ENST00000591275 TDRD7Q8NHU6 1098 aaKnown RBP20.19■□□□□ 0.82
DDX39A-216ENST00000591275 TMEM106CQ9BVX2 250 aa20.19■□□□□ 0.82
DDX39A-216ENST00000591275 TMEM39BQ9GZU3 492 aa20.19■□□□□ 0.82
DDX39A-216ENST00000591275 SERPINA10Q9UK55 444 aa20.19■□□□□ 0.82
DDX39A-216ENST00000591275 PTCH2Q9Y6C5 1203 aa20.19■□□□□ 0.82
DDX39A-216ENST00000591275 MYCP01106 439 aaPredicted RBP20.18■□□□□ 0.82
DDX39A-216ENST00000591275 HIBADHP31937 336 aaKnown RBP20.18■□□□□ 0.82
DDX39A-216ENST00000591275 EXOSC9Q06265 439 aaKnown RBP20.18■□□□□ 0.82
DDX39A-216ENST00000591275 OTUD5Q96G74 571 aa20.18■□□□□ 0.82
DDX39A-216ENST00000591275 ZNF333Q96JL9 665 aa20.18■□□□□ 0.82
DDX39A-216ENST00000591275 SALL2Q9Y467 1007 aaPredicted RBP20.18■□□□□ 0.82
DDX39A-216ENST00000591275 GRM8O00222 908 aa20.17■□□□□ 0.82
DDX39A-216ENST00000591275 CRKP46108 304 aa20.17■□□□□ 0.82
DDX39A-216ENST00000591275 GTF2A2P52657 109 aa20.17■□□□□ 0.82
DDX39A-216ENST00000591275 SLC9C1Q4G0N8 1177 aa20.17■□□□□ 0.82
DDX39A-216ENST00000591275 FAM43AQ8N2R8 423 aa20.17■□□□□ 0.82
DDX39A-216ENST00000591275 FAM84BQ96KN1 310 aaPredicted RBP20.17■□□□□ 0.82
DDX39A-216ENST00000591275 PUS3Q9BZE2 481 aaKnown RBP20.17■□□□□ 0.82
DDX39A-216ENST00000591275 ZFYVE28Q9HCC9 887 aa20.17■□□□□ 0.82
DDX39A-216ENST00000591275 TRIOBPQ9H2D6 2365 aa20.16■□□□□ 0.82
DDX39A-216ENST00000591275 MAP3K9P80192 1104 aa20.16■□□□□ 0.82
DDX39A-216ENST00000591275 UBE4AQ14139 1066 aa20.16■□□□□ 0.82
DDX39A-216ENST00000591275 GRIK5Q16478 980 aa20.16■□□□□ 0.82
DDX39A-216ENST00000591275 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.16■□□□□ 0.82
DDX39A-216ENST00000591275 C9orf78Q9NZ63 289 aaPredicted RBP20.16■□□□□ 0.82
DDX39A-216ENST00000591275 IQSEC3Q9UPP2 1182 aaPredicted RBP20.16■□□□□ 0.82
DDX39A-216ENST00000591275 CSADQ9Y600 493 aa20.16■□□□□ 0.82
DDX39A-216ENST00000591275 ARAP2Q8WZ64 1704 aa20.16■□□□□ 0.82
DDX39A-216ENST00000591275 ZEB1P37275 1124 aaPredicted RBP20.15■□□□□ 0.82
DDX39A-216ENST00000591275 TNNI2P48788 182 aa20.15■□□□□ 0.82
DDX39A-216ENST00000591275 CACNB3P54284 484 aa20.15■□□□□ 0.82
DDX39A-216ENST00000591275 SLC4A8Q2Y0W8 1093 aa20.15■□□□□ 0.82
DDX39A-216ENST00000591275 ZSWIM8A7E2V4 1837 aa20.14■□□□□ 0.81
DDX39A-216ENST00000591275 FXR1P51114 621 aaKnown RBP eCLIP20.14■□□□□ 0.81
DDX39A-216ENST00000591275 CHAF1AQ13111 956 aaPredicted RBP20.14■□□□□ 0.81
DDX39A-216ENST00000591275 ARHGEF6Q15052 776 aa20.14■□□□□ 0.81
DDX39A-216ENST00000591275 NBPF11Q86T75 865 aa20.14■□□□□ 0.81
DDX39A-216ENST00000591275 ARHGAP39Q9C0H5 1083 aa20.14■□□□□ 0.81
DDX39A-216ENST00000591275 SLC4A10Q6U841 1118 aa20.13■□□□□ 0.81
DDX39A-216ENST00000591275 ECM2O94769 699 aaPredicted RBP20.12■□□□□ 0.81
DDX39A-216ENST00000591275 VPS37DQ86XT2 251 aa20.12■□□□□ 0.81
DDX39A-216ENST00000591275 SH3TC2Q8TF17 1288 aa20.12■□□□□ 0.81
DDX39A-216ENST00000591275 SUCLG2Q96I99 432 aa20.12■□□□□ 0.81
DDX39A-216ENST00000591275 COLQQ9Y215 455 aaPredicted RBP20.12■□□□□ 0.81
DDX39A-216ENST00000591275 SPDYE5A6NIY4 337 aa20.11■□□□□ 0.81
DDX39A-216ENST00000591275 SNCAIPQ9Y6H5 919 aa20.11■□□□□ 0.81
DDX39A-216ENST00000591275 FRAT2O75474 233 aaPredicted RBP20.1■□□□□ 0.81
DDX39A-216ENST00000591275 CETPP11597 493 aa20.1■□□□□ 0.81
DDX39A-216ENST00000591275 WDR63Q8IWG1 891 aa20.1■□□□□ 0.81
DDX39A-216ENST00000591275 ZKSCAN4Q969J2 545 aaPredicted RBP20.1■□□□□ 0.81
DDX39A-216ENST00000591275 KAZALD1Q96I82 304 aa20.1■□□□□ 0.81
DDX39A-216ENST00000591275 WRNIP1Q96S55 665 aa20.1■□□□□ 0.81
DDX39A-216ENST00000591275 SPINK5Q9NQ38 1064 aaPredicted RBP20.1■□□□□ 0.81
DDX39A-216ENST00000591275 RIPOR2Q9Y4F9 1068 aa20.1■□□□□ 0.81
DDX39A-216ENST00000591275 BTBD19C9JJ37 291 aa20.09■□□□□ 0.81
DDX39A-216ENST00000591275 TLR2O60603 784 aa20.09■□□□□ 0.81
DDX39A-216ENST00000591275 WDHD1O75717 1129 aaPredicted RBP20.09■□□□□ 0.81
DDX39A-216ENST00000591275 ALDH1L1O75891 902 aa20.09■□□□□ 0.81
DDX39A-216ENST00000591275 LACTBP83111 547 aaPredicted RBP20.09■□□□□ 0.81
DDX39A-216ENST00000591275 KIF22Q14807 665 aa20.09■□□□□ 0.81
DDX39A-216ENST00000591275 NCBP3Q53F19 620 aaKnown RBP20.09■□□□□ 0.81
DDX39A-216ENST00000591275 FBXO33Q7Z6M2 555 aa20.09■□□□□ 0.81
DDX39A-216ENST00000591275 ERO1BQ86YB8 467 aa20.09■□□□□ 0.81
DDX39A-216ENST00000591275 TEKT1Q969V4 418 aa20.09■□□□□ 0.81
DDX39A-216ENST00000591275 SRCIN1Q9C0H9 1055 aa20.09■□□□□ 0.81
DDX39A-216ENST00000591275 MROH5Q6ZUA9 1318 aa20.08■□□□□ 0.81
DDX39A-216ENST00000591275 IRF6O14896 467 aa20.08■□□□□ 0.81
DDX39A-216ENST00000591275 H0YGN5 161 aa20.07■□□□□ 0.8
DDX39A-216ENST00000591275 NBPF7P0C2Y1 421 aaPredicted RBP20.07■□□□□ 0.8
DDX39A-216ENST00000591275 HDLBPQ00341 1268 aaKnown RBP20.07■□□□□ 0.8
DDX39A-216ENST00000591275 SNAPC2Q13487 334 aa20.07■□□□□ 0.8
DDX39A-216ENST00000591275 LRRC24Q50LG9 513 aa20.07■□□□□ 0.8
DDX39A-216ENST00000591275 TMOD2Q9NZR1 351 aa20.07■□□□□ 0.8
DDX39A-216ENST00000591275 RANBP2P49792 3224 aaKnown RBP20.06■□□□□ 0.8
DDX39A-216ENST00000591275 CAVIN4Q5BKX8 364 aa20.06■□□□□ 0.8
DDX39A-216ENST00000591275 METTL24Q5JXM2 366 aa20.06■□□□□ 0.8
DDX39A-216ENST00000591275 TBC1D22AQ8WUA7 517 aa20.06■□□□□ 0.8
DDX39A-216ENST00000591275 BICC1Q9H694 974 aaKnown RBP20.06■□□□□ 0.8
DDX39A-216ENST00000591275 MRS2Q9HD23 443 aa20.06■□□□□ 0.8
DDX39A-216ENST00000591275 BCAMP50895 628 aa20.05■□□□□ 0.8
DDX39A-216ENST00000591275 PPIL2Q13356 520 aa20.05■□□□□ 0.8
DDX39A-216ENST00000591275 MIGA2Q7L4E1 593 aa20.05■□□□□ 0.8
DDX39A-216ENST00000591275 ZDHHC15Q96MV8 337 aa20.05■□□□□ 0.8
DDX39A-216ENST00000591275 ZCCHC17Q9NP64 241 aaKnown RBP20.05■□□□□ 0.8
DDX39A-216ENST00000591275 SZT2Q5T011 3432 aa20.05■□□□□ 0.8
DDX39A-216ENST00000591275 APOBEC3HQ6NTF7 200 aaKnown RBP20.04■□□□□ 0.8
DDX39A-216ENST00000591275 FAM83AQ86UY5 434 aa20.04■□□□□ 0.8
DDX39A-216ENST00000591275 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.04■□□□□ 0.8
DDX39A-216ENST00000591275 CPA4Q9UI42 421 aa20.04■□□□□ 0.8
DDX39A-216ENST00000591275 CTGFP29279 349 aa20.03■□□□□ 0.8
DDX39A-216ENST00000591275 INPP5BP32019 993 aa20.03■□□□□ 0.8
DDX39A-216ENST00000591275 MTFR1Q15390 333 aa20.03■□□□□ 0.8
DDX39A-216ENST00000591275 VGLL2Q8N8G2 317 aa20.03■□□□□ 0.8
DDX39A-216ENST00000591275 KLHDC4Q8TBB5 520 aa20.03■□□□□ 0.8
DDX39A-216ENST00000591275 HOOK2Q96ED9 719 aa20.03■□□□□ 0.8
DDX39A-216ENST00000591275 PDE8BO95263 885 aa20.02■□□□□ 0.8
DDX39A-216ENST00000591275 GNRH1P01148 92 aa20.02■□□□□ 0.8
DDX39A-216ENST00000591275 DCAF15Q66K64 600 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms