RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 CFHR5Q9BXR6 569 aa22.4■■□□□ 1.18
VAT1-208ENST00000590924 TBC1D8O95759 1140 aa22.39■■□□□ 1.17
VAT1-208ENST00000590924 MLLT1Q03111 559 aaPredicted RBP22.39■■□□□ 1.17
VAT1-208ENST00000590924 RASA3Q14644 834 aa22.39■■□□□ 1.17
VAT1-208ENST00000590924 CAVIN4Q5BKX8 364 aa22.39■■□□□ 1.17
VAT1-208ENST00000590924 NBPF12Q5TAG4 269 aaPredicted RBP22.39■■□□□ 1.17
VAT1-208ENST00000590924 KLHDC4Q8TBB5 520 aa22.39■■□□□ 1.17
VAT1-208ENST00000590924 ZBTB48P10074 688 aaPredicted RBP22.38■■□□□ 1.17
VAT1-208ENST00000590924 DZIP1LQ8IYY4 767 aaKnown RBP22.38■■□□□ 1.17
VAT1-208ENST00000590924 TBC1D22AQ8WUA7 517 aa22.38■■□□□ 1.17
VAT1-208ENST00000590924 SLC10A4Q96EP9 437 aa22.38■■□□□ 1.17
VAT1-208ENST00000590924 ZNF70Q9UC06 446 aaPredicted RBP22.38■■□□□ 1.17
VAT1-208ENST00000590924 MANSC4A6NHS7 340 aaPredicted RBP22.37■■□□□ 1.17
VAT1-208ENST00000590924 CRKP46108 304 aa22.37■■□□□ 1.17
VAT1-208ENST00000590924 ZNF296Q8WUU4 475 aaPredicted RBP22.37■■□□□ 1.17
VAT1-208ENST00000590924 TDRD3Q9H7E2 651 aaKnown RBP22.37■■□□□ 1.17
VAT1-208ENST00000590924 IQSEC3Q9UPP2 1182 aaPredicted RBP22.37■■□□□ 1.17
VAT1-208ENST00000590924 AK9Q5TCS8 1911 aa22.36■■□□□ 1.17
VAT1-208ENST00000590924 GPR25O00155 361 aa22.36■■□□□ 1.17
VAT1-208ENST00000590924 FGFR2P21802 821 aa22.36■■□□□ 1.17
VAT1-208ENST00000590924 RFX5P48382 616 aaPredicted RBP22.36■■□□□ 1.17
VAT1-208ENST00000590924 INHBEP58166 350 aa22.36■■□□□ 1.17
VAT1-208ENST00000590924 HDLBPQ00341 1268 aaKnown RBP22.36■■□□□ 1.17
VAT1-208ENST00000590924 PUM3Q15397 648 aaKnown RBP22.36■■□□□ 1.17
VAT1-208ENST00000590924 WNK4Q96J92 1243 aa22.36■■□□□ 1.17
VAT1-208ENST00000590924 CLMNQ96JQ2 1002 aa22.36■■□□□ 1.17
VAT1-208ENST00000590924 PDE4DIPQ5VU43 2346 aa22.35■■□□□ 1.17
VAT1-208ENST00000590924 USP2O75604 605 aaPredicted RBP22.35■■□□□ 1.17
VAT1-208ENST00000590924 ALDH1A1P00352 501 aa22.35■■□□□ 1.17
VAT1-208ENST00000590924 IREB2P48200 963 aaKnown RBP22.35■■□□□ 1.17
VAT1-208ENST00000590924 CHAF1AQ13111 956 aaPredicted RBP22.35■■□□□ 1.17
VAT1-208ENST00000590924 PDE3AQ14432 1141 aa22.35■■□□□ 1.17
VAT1-208ENST00000590924 GRIK5Q16478 980 aa22.35■■□□□ 1.17
VAT1-208ENST00000590924 PKN2Q16513 984 aaKnown RBP22.35■■□□□ 1.17
VAT1-208ENST00000590924 FTSJ3Q8IY81 847 aaKnown RBP22.35■■□□□ 1.17
VAT1-208ENST00000590924 CLUAP1Q96AJ1 413 aa22.35■■□□□ 1.17
VAT1-208ENST00000590924 EYA2O00167 538 aa22.34■■□□□ 1.17
VAT1-208ENST00000590924 FRAT2O75474 233 aaPredicted RBP22.34■■□□□ 1.17
VAT1-208ENST00000590924 IFIT1P09914 478 aaKnown RBP22.34■■□□□ 1.17
VAT1-208ENST00000590924 ANKRD13AQ8IZ07 590 aa22.34■■□□□ 1.17
VAT1-208ENST00000590924 HDAC5Q9UQL6 1122 aa22.34■■□□□ 1.17
VAT1-208ENST00000590924 BCAMP50895 628 aa22.33■■□□□ 1.17
VAT1-208ENST00000590924 TEPSINQ96N21 525 aa22.33■■□□□ 1.17
VAT1-208ENST00000590924 TNNQ9UQP3 1299 aa22.33■■□□□ 1.17
VAT1-208ENST00000590924 SUGT1Q9Y2Z0 365 aa22.33■■□□□ 1.17
VAT1-208ENST00000590924 UBTFL1P0CB47 393 aaPredicted RBP22.32■■□□□ 1.16
VAT1-208ENST00000590924 TNNI2P48788 182 aa22.32■■□□□ 1.16
VAT1-208ENST00000590924 IFNL1Q8IU54 200 aa22.32■■□□□ 1.16
VAT1-208ENST00000590924 TMEM57Q8N5G2 664 aa22.32■■□□□ 1.16
VAT1-208ENST00000590924 TEKT1Q969V4 418 aa22.32■■□□□ 1.16
VAT1-208ENST00000590924 FBXO3Q9UK99 471 aa22.32■■□□□ 1.16
VAT1-208ENST00000590924 MAST3O60307 1309 aa22.31■■□□□ 1.16
VAT1-208ENST00000590924 MYH2Q9UKX2 1941 aa22.31■■□□□ 1.16
VAT1-208ENST00000590924 FKTNO75072 461 aa22.31■■□□□ 1.16
VAT1-208ENST00000590924 SLC5A1P13866 664 aa22.31■■□□□ 1.16
VAT1-208ENST00000590924 ATG9AQ7Z3C6 839 aa22.31■■□□□ 1.16
VAT1-208ENST00000590924 MRIQ9BWK5 157 aa22.31■■□□□ 1.16
VAT1-208ENST00000590924 R3HDMLQ9H3Y0 253 aa22.31■■□□□ 1.16
VAT1-208ENST00000590924 TCP10L2B9ZVM9 353 aa22.3■■□□□ 1.16
VAT1-208ENST00000590924 GNAI3P08754 354 aa22.3■■□□□ 1.16
VAT1-208ENST00000590924 RLBP1P12271 317 aa22.3■■□□□ 1.16
VAT1-208ENST00000590924 CDAN1Q8IWY9 1227 aa22.3■■□□□ 1.16
VAT1-208ENST00000590924 LPIN2Q92539 896 aa22.3■■□□□ 1.16
VAT1-208ENST00000590924 ZDHHC15Q96MV8 337 aa22.3■■□□□ 1.16
VAT1-208ENST00000590924 TMEM39BQ9GZU3 492 aa22.3■■□□□ 1.16
VAT1-208ENST00000590924 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.3■■□□□ 1.16
VAT1-208ENST00000590924 IGF2BP3O00425 579 aaKnown RBP eCLIP22.29■■□□□ 1.16
VAT1-208ENST00000590924 TNRC18O15417 2968 aaPredicted RBP22.29■■□□□ 1.16
VAT1-208ENST00000590924 GJA5P36382 358 aa22.29■■□□□ 1.16
VAT1-208ENST00000590924 RRP1P56182 461 aaKnown RBP22.29■■□□□ 1.16
VAT1-208ENST00000590924 HPS5Q9UPZ3 1129 aa22.29■■□□□ 1.16
VAT1-208ENST00000590924 CIAO1O76071 339 aa22.28■■□□□ 1.16
VAT1-208ENST00000590924 SOX10P56693 466 aa22.27■■□□□ 1.16
VAT1-208ENST00000590924 FKBP1CQ5VVH2 108 aa22.27■■□□□ 1.16
VAT1-208ENST00000590924 FBXO46Q6PJ61 603 aaPredicted RBP22.27■■□□□ 1.16
VAT1-208ENST00000590924 HHIPL2Q6UWX4 724 aa22.27■■□□□ 1.16
VAT1-208ENST00000590924 WDR66Q8TBY9 1149 aa22.27■■□□□ 1.16
VAT1-208ENST00000590924 PANK1Q8TE04 598 aa22.27■■□□□ 1.16
VAT1-208ENST00000590924 CHMP4BQ9H444 224 aaKnown RBP22.27■■□□□ 1.16
VAT1-208ENST00000590924 TMOD2Q9NZR1 351 aa22.27■■□□□ 1.16
VAT1-208ENST00000590924 RPAP1Q9BWH6 1393 aaPredicted RBP22.26■■□□□ 1.15
VAT1-208ENST00000590924 TESPA1A2RU30 521 aaPredicted RBP22.26■■□□□ 1.15
VAT1-208ENST00000590924 APOBEC3HQ6NTF7 200 aaKnown RBP22.26■■□□□ 1.15
VAT1-208ENST00000590924 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.26■■□□□ 1.15
VAT1-208ENST00000590924 FAM83AQ86UY5 434 aa22.26■■□□□ 1.15
VAT1-208ENST00000590924 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.26■■□□□ 1.15
VAT1-208ENST00000590924 OPTNQ96CV9 577 aa22.26■■□□□ 1.15
VAT1-208ENST00000590924 SIL1Q9H173 461 aa22.26■■□□□ 1.15
VAT1-208ENST00000590924 ELP3Q9H9T3 547 aa22.26■■□□□ 1.15
VAT1-208ENST00000590924 DOCK2Q92608 1830 aa22.25■■□□□ 1.15
VAT1-208ENST00000590924 ZBTB7BO15156 539 aaPredicted RBP22.25■■□□□ 1.15
VAT1-208ENST00000590924 CACNB3P54284 484 aa22.25■■□□□ 1.15
VAT1-208ENST00000590924 MVPQ14764 893 aaKnown RBP22.25■■□□□ 1.15
VAT1-208ENST00000590924 ATP2B3Q16720 1220 aa22.25■■□□□ 1.15
VAT1-208ENST00000590924 OTUD7BQ6GQQ9 843 aa22.25■■□□□ 1.15
VAT1-208ENST00000590924 ITPRIPQ8IWB1 547 aa22.25■■□□□ 1.15
VAT1-208ENST00000590924 CEP126Q9P2H0 1117 aa22.25■■□□□ 1.15
VAT1-208ENST00000590924 DDX19BQ9UMR2 479 aa22.25■■□□□ 1.15
VAT1-208ENST00000590924 LRRFIP2Q9Y608 721 aaKnown RBP22.25■■□□□ 1.15
VAT1-208ENST00000590924 RBBP6Q7Z6E9 1792 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms