RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 TNNI2P48788 182 aa22.46■■□□□ 1.19
PRKCSH-211ENST00000590098 PUM3Q15397 648 aaKnown RBP22.46■■□□□ 1.19
PRKCSH-211ENST00000590098 WNK4Q96J92 1243 aa22.46■■□□□ 1.19
PRKCSH-211ENST00000590098 USP2O75604 605 aaPredicted RBP22.45■■□□□ 1.18
PRKCSH-211ENST00000590098 IFIT1P09914 478 aaKnown RBP22.45■■□□□ 1.18
PRKCSH-211ENST00000590098 BCAMP50895 628 aa22.45■■□□□ 1.18
PRKCSH-211ENST00000590098 SOX10P56693 466 aa22.45■■□□□ 1.18
PRKCSH-211ENST00000590098 GRIK5Q16478 980 aa22.45■■□□□ 1.18
PRKCSH-211ENST00000590098 ANKRD13AQ8IZ07 590 aa22.45■■□□□ 1.18
PRKCSH-211ENST00000590098 CFHR5Q9BXR6 569 aa22.45■■□□□ 1.18
PRKCSH-211ENST00000590098 TCP10L2B9ZVM9 353 aa22.44■■□□□ 1.18
PRKCSH-211ENST00000590098 CT47B1P0C2W7 299 aaPredicted RBP22.44■■□□□ 1.18
PRKCSH-211ENST00000590098 HDLBPQ00341 1268 aaKnown RBP22.44■■□□□ 1.18
PRKCSH-211ENST00000590098 TRMT2AQ8IZ69 625 aaKnown RBP22.44■■□□□ 1.18
PRKCSH-211ENST00000590098 TEKT1Q969V4 418 aa22.44■■□□□ 1.18
PRKCSH-211ENST00000590098 KIF16BQ96L93 1317 aa22.43■■□□□ 1.18
PRKCSH-211ENST00000590098 EYA2O00167 538 aa22.43■■□□□ 1.18
PRKCSH-211ENST00000590098 FKTNO75072 461 aa22.43■■□□□ 1.18
PRKCSH-211ENST00000590098 UBTFL1P0CB47 393 aaPredicted RBP22.43■■□□□ 1.18
PRKCSH-211ENST00000590098 IFNL1Q8IU54 200 aa22.43■■□□□ 1.18
PRKCSH-211ENST00000590098 SLC5A1P13866 664 aa22.42■■□□□ 1.18
PRKCSH-211ENST00000590098 CDAN1Q8IWY9 1227 aa22.42■■□□□ 1.18
PRKCSH-211ENST00000590098 NOB1Q9ULX3 412 aaKnown RBP22.42■■□□□ 1.18
PRKCSH-211ENST00000590098 HPS5Q9UPZ3 1129 aa22.42■■□□□ 1.18
PRKCSH-211ENST00000590098 HDAC5Q9UQL6 1122 aa22.42■■□□□ 1.18
PRKCSH-211ENST00000590098 MYH13Q9UKX3 1938 aa22.41■■□□□ 1.18
PRKCSH-211ENST00000590098 LAMB1P07942 1786 aa22.41■■□□□ 1.18
PRKCSH-211ENST00000590098 MAST3O60307 1309 aa22.41■■□□□ 1.18
PRKCSH-211ENST00000590098 FGFR2P21802 821 aa22.41■■□□□ 1.18
PRKCSH-211ENST00000590098 RFX5P48382 616 aaPredicted RBP22.41■■□□□ 1.18
PRKCSH-211ENST00000590098 OTUD7BQ6GQQ9 843 aa22.41■■□□□ 1.18
PRKCSH-211ENST00000590098 LPIN2Q92539 896 aa22.41■■□□□ 1.18
PRKCSH-211ENST00000590098 API5Q9BZZ5 524 aaKnown RBP22.41■■□□□ 1.18
PRKCSH-211ENST00000590098 SUGT1Q9Y2Z0 365 aa22.41■■□□□ 1.18
PRKCSH-211ENST00000590098 TNRC18O15417 2968 aaPredicted RBP22.41■■□□□ 1.18
PRKCSH-211ENST00000590098 GJA5P36382 358 aa22.4■■□□□ 1.18
PRKCSH-211ENST00000590098 TEPSINQ96N21 525 aa22.4■■□□□ 1.18
PRKCSH-211ENST00000590098 MRIQ9BWK5 157 aa22.4■■□□□ 1.18
PRKCSH-211ENST00000590098 TMEM39BQ9GZU3 492 aa22.4■■□□□ 1.18
PRKCSH-211ENST00000590098 TMOD2Q9NZR1 351 aa22.4■■□□□ 1.18
PRKCSH-211ENST00000590098 OTOFQ9HC10 1997 aa22.39■■□□□ 1.18
PRKCSH-211ENST00000590098 CCER2I3L3R5 266 aa22.39■■□□□ 1.17
PRKCSH-211ENST00000590098 ZDHHC15Q96MV8 337 aa22.39■■□□□ 1.17
PRKCSH-211ENST00000590098 ELP3Q9H9T3 547 aa22.39■■□□□ 1.17
PRKCSH-211ENST00000590098 IGF2BP3O00425 579 aaKnown RBP eCLIP22.38■■□□□ 1.17
PRKCSH-211ENST00000590098 WDR66Q8TBY9 1149 aa22.38■■□□□ 1.17
PRKCSH-211ENST00000590098 OPTNQ96CV9 577 aa22.38■■□□□ 1.17
PRKCSH-211ENST00000590098 SIL1Q9H173 461 aa22.38■■□□□ 1.17
PRKCSH-211ENST00000590098 CEP126Q9P2H0 1117 aa22.38■■□□□ 1.17
PRKCSH-211ENST00000590098 FBXO3Q9UK99 471 aa22.38■■□□□ 1.17
PRKCSH-211ENST00000590098 CIAO1O76071 339 aa22.37■■□□□ 1.17
PRKCSH-211ENST00000590098 CACNB3P54284 484 aa22.37■■□□□ 1.17
PRKCSH-211ENST00000590098 FBXO46Q6PJ61 603 aaPredicted RBP22.37■■□□□ 1.17
PRKCSH-211ENST00000590098 ATG9AQ7Z3C6 839 aa22.37■■□□□ 1.17
PRKCSH-211ENST00000590098 MAP3K9P80192 1104 aa22.36■■□□□ 1.17
PRKCSH-211ENST00000590098 ATP2B3Q16720 1220 aa22.36■■□□□ 1.17
PRKCSH-211ENST00000590098 CSADQ9Y600 493 aa22.36■■□□□ 1.17
PRKCSH-211ENST00000590098 PDE4DIPQ5VU43 2346 aa22.35■■□□□ 1.17
PRKCSH-211ENST00000590098 FKBP1CQ5VVH2 108 aa22.35■■□□□ 1.17
PRKCSH-211ENST00000590098 HHIPL2Q6UWX4 724 aa22.35■■□□□ 1.17
PRKCSH-211ENST00000590098 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.35■■□□□ 1.17
PRKCSH-211ENST00000590098 FAM83AQ86UY5 434 aa22.35■■□□□ 1.17
PRKCSH-211ENST00000590098 HOOK2Q96ED9 719 aa22.35■■□□□ 1.17
PRKCSH-211ENST00000590098 PTPN18Q99952 460 aa22.35■■□□□ 1.17
PRKCSH-211ENST00000590098 GNL3LQ9NVN8 582 aaKnown RBP22.35■■□□□ 1.17
PRKCSH-211ENST00000590098 LRRFIP2Q9Y608 721 aaKnown RBP22.35■■□□□ 1.17
PRKCSH-211ENST00000590098 TESPA1A2RU30 521 aaPredicted RBP22.34■■□□□ 1.17
PRKCSH-211ENST00000590098 VGLL4Q14135 290 aa22.34■■□□□ 1.17
PRKCSH-211ENST00000590098 APOBEC3HQ6NTF7 200 aaKnown RBP22.34■■□□□ 1.17
PRKCSH-211ENST00000590098 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.34■■□□□ 1.17
PRKCSH-211ENST00000590098 IL15P40933 162 aaPredicted RBP22.33■■□□□ 1.17
PRKCSH-211ENST00000590098 RARSP54136 660 aaKnown RBP22.33■■□□□ 1.17
PRKCSH-211ENST00000590098 CNKSR2Q8WXI2 1034 aa22.33■■□□□ 1.17
PRKCSH-211ENST00000590098 GTF2A2P52657 109 aa22.32■■□□□ 1.16
PRKCSH-211ENST00000590098 CRHR2Q13324 411 aa22.32■■□□□ 1.16
PRKCSH-211ENST00000590098 ERO1AQ96HE7 468 aa22.32■■□□□ 1.16
PRKCSH-211ENST00000590098 TRIM17Q9Y577 477 aa22.32■■□□□ 1.16
PRKCSH-211ENST00000590098 AK9Q5TCS8 1911 aa22.31■■□□□ 1.16
PRKCSH-211ENST00000590098 ARHGAP45Q92619 1136 aa22.31■■□□□ 1.16
PRKCSH-211ENST00000590098 OTUD5Q96G74 571 aa22.31■■□□□ 1.16
PRKCSH-211ENST00000590098 MS4A4AQ96JQ5 239 aa22.31■■□□□ 1.16
PRKCSH-211ENST00000590098 MEIS3Q99687 375 aa22.31■■□□□ 1.16
PRKCSH-211ENST00000590098 LDHBP07195 334 aaKnown RBP22.3■■□□□ 1.16
PRKCSH-211ENST00000590098 GNAI3P08754 354 aa22.3■■□□□ 1.16
PRKCSH-211ENST00000590098 CAP1Q01518 475 aa22.3■■□□□ 1.16
PRKCSH-211ENST00000590098 DCAF15Q66K64 600 aa22.3■■□□□ 1.16
PRKCSH-211ENST00000590098 WRNIP1Q96S55 665 aa22.3■■□□□ 1.16
PRKCSH-211ENST00000590098 COPRSQ9NQ92 184 aa22.3■■□□□ 1.16
PRKCSH-211ENST00000590098 PA2G4Q9UQ80 394 aaKnown RBP22.3■■□□□ 1.16
PRKCSH-211ENST00000590098 CCL15-CCL14A0A0B4J2E2 113 aa22.29■■□□□ 1.16
PRKCSH-211ENST00000590098 SEMA3EO15041 775 aa22.29■■□□□ 1.16
PRKCSH-211ENST00000590098 CCL15Q16663 113 aa22.29■■□□□ 1.16
PRKCSH-211ENST00000590098 INTS3Q68E01 1043 aaKnown RBP22.29■■□□□ 1.16
PRKCSH-211ENST00000590098 OTOP1Q7RTM1 612 aa22.29■■□□□ 1.16
PRKCSH-211ENST00000590098 DENND2AQ9ULE3 1009 aa22.29■■□□□ 1.16
PRKCSH-211ENST00000590098 RPAP1Q9BWH6 1393 aaPredicted RBP22.28■■□□□ 1.16
PRKCSH-211ENST00000590098 SPDYE5A6NIY4 337 aa22.28■■□□□ 1.16
PRKCSH-211ENST00000590098 IPO8O15397 1037 aaKnown RBP22.28■■□□□ 1.16
PRKCSH-211ENST00000590098 SP3Q02447 781 aa22.28■■□□□ 1.16
PRKCSH-211ENST00000590098 CD99L2Q8TCZ2 262 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms