RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 PI16Q6UXB8 463 aa26.06■■□□□ 1.76
ATG4D-212ENST00000590096 GCC1Q96CN9 775 aa26.06■■□□□ 1.76
ATG4D-212ENST00000590096 ZBTB47Q9UFB7 747 aaPredicted RBP26.06■■□□□ 1.76
ATG4D-212ENST00000590096 PRDX5P30044 214 aa26.05■■□□□ 1.76
ATG4D-212ENST00000590096 CRKP46108 304 aa26.05■■□□□ 1.76
ATG4D-212ENST00000590096 HDLBPQ00341 1268 aaKnown RBP26.05■■□□□ 1.76
ATG4D-212ENST00000590096 TEKT1Q969V4 418 aa26.05■■□□□ 1.76
ATG4D-212ENST00000590096 SPDYE2BA6NHP3 402 aa26.04■■□□□ 1.76
ATG4D-212ENST00000590096 MYO1BO43795 1136 aa26.04■■□□□ 1.76
ATG4D-212ENST00000590096 SPDYE6P0CI01 402 aa26.04■■□□□ 1.76
ATG4D-212ENST00000590096 IFFO2Q5TF58 517 aa26.04■■□□□ 1.76
ATG4D-212ENST00000590096 ANGEL2Q5VTE6 544 aaKnown RBP26.04■■□□□ 1.76
ATG4D-212ENST00000590096 CDC37L1Q7L3B6 337 aa26.04■■□□□ 1.76
ATG4D-212ENST00000590096 DNAJC5GQ8N7S2 189 aa26.04■■□□□ 1.76
ATG4D-212ENST00000590096 ZBED3Q96IU2 234 aaPredicted RBP26.04■■□□□ 1.76
ATG4D-212ENST00000590096 SNRKQ9NRH2 765 aa26.04■■□□□ 1.76
ATG4D-212ENST00000590096 ASTN2O75129 1339 aaPredicted RBP26.04■■□□□ 1.76
ATG4D-212ENST00000590096 ITGBL1O95965 494 aaPredicted RBP26.03■■□□□ 1.76
ATG4D-212ENST00000590096 ERICH6Q7L0X2 663 aa26.03■■□□□ 1.76
ATG4D-212ENST00000590096 KRT26Q7Z3Y9 468 aa26.03■■□□□ 1.76
ATG4D-212ENST00000590096 MRIQ9BWK5 157 aa26.03■■□□□ 1.76
ATG4D-212ENST00000590096 AKAP11Q9UKA4 1901 aa26.03■■□□□ 1.76
ATG4D-212ENST00000590096 PITPNM2Q9BZ72 1349 aa26.03■■□□□ 1.76
ATG4D-212ENST00000590096 POLR2AP24928 1970 aaKnown RBP26.02■■□□□ 1.76
ATG4D-212ENST00000590096 DZIP1Q86YF9 867 aaKnown RBP26.02■■□□□ 1.76
ATG4D-212ENST00000590096 SULF1Q8IWU6 871 aa26.02■■□□□ 1.76
ATG4D-212ENST00000590096 GLIS2Q9BZE0 524 aaPredicted RBP26.02■■□□□ 1.76
ATG4D-212ENST00000590096 PCDHAC2Q9Y5I4 1007 aa26.02■■□□□ 1.76
ATG4D-212ENST00000590096 ECM29Q5VYK3 1845 aa26.02■■□□□ 1.76
ATG4D-212ENST00000590096 HHIPL2Q6UWX4 724 aa26.01■■□□□ 1.75
ATG4D-212ENST00000590096 USP48Q86UV5 1035 aa26.01■■□□□ 1.75
ATG4D-212ENST00000590096 PRMT6Q96LA8 375 aaPredicted RBP26.01■■□□□ 1.75
ATG4D-212ENST00000590096 PASKQ96RG2 1323 aa26.01■■□□□ 1.75
ATG4D-212ENST00000590096 ZAP70P43403 619 aa26■■□□□ 1.75
ATG4D-212ENST00000590096 ANKRD45Q5TZF3 282 aa26■■□□□ 1.75
ATG4D-212ENST00000590096 TBC1D9Q6ZT07 1266 aa26■■□□□ 1.75
ATG4D-212ENST00000590096 SLF2Q8IX21 1173 aa26■■□□□ 1.75
ATG4D-212ENST00000590096 LRP2BPQ9P2M1 347 aa26■■□□□ 1.75
ATG4D-212ENST00000590096 APOBEC3FQ8IUX4 373 aaKnown RBP25.99■■□□□ 1.75
ATG4D-212ENST00000590096 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.99■■□□□ 1.75
ATG4D-212ENST00000590096 GPATCH3Q96I76 525 aa25.99■■□□□ 1.75
ATG4D-212ENST00000590096 ZDHHC15Q96MV8 337 aa25.99■■□□□ 1.75
ATG4D-212ENST00000590096 RAI14Q9P0K7 980 aa25.99■■□□□ 1.75
ATG4D-212ENST00000590096 TRAF5O00463 557 aa25.98■■□□□ 1.75
ATG4D-212ENST00000590096 CYP2E1P05181 493 aaPredicted RBP25.98■■□□□ 1.75
ATG4D-212ENST00000590096 DIXDC1Q155Q3 683 aa25.98■■□□□ 1.75
ATG4D-212ENST00000590096 CLRN2A0PK11 232 aa25.97■■□□□ 1.75
ATG4D-212ENST00000590096 ADM5C9JUS6 153 aa25.97■■□□□ 1.75
ATG4D-212ENST00000590096 IGHDP01880 384 aa25.97■■□□□ 1.75
ATG4D-212ENST00000590096 VEZTQ9HBM0 779 aa25.97■■□□□ 1.75
ATG4D-212ENST00000590096 MYH2Q9UKX2 1941 aa25.96■■□□□ 1.75
ATG4D-212ENST00000590096 ATP5JP18859 108 aa25.96■■□□□ 1.75
ATG4D-212ENST00000590096 GSTO1P78417 241 aa25.96■■□□□ 1.75
ATG4D-212ENST00000590096 MECOMQ03112 1051 aa25.96■■□□□ 1.75
ATG4D-212ENST00000590096 SMC5Q8IY18 1101 aa25.96■■□□□ 1.75
ATG4D-212ENST00000590096 DNAJC2Q99543 621 aaKnown RBP25.96■■□□□ 1.75
ATG4D-212ENST00000590096 TDRD3Q9H7E2 651 aaKnown RBP25.96■■□□□ 1.75
ATG4D-212ENST00000590096 ECHDC1Q9NTX5 307 aa25.96■■□□□ 1.75
ATG4D-212ENST00000590096 DAGLAQ9Y4D2 1042 aa25.96■■□□□ 1.75
ATG4D-212ENST00000590096 SPDYE2Q495Y8 402 aa25.95■■□□□ 1.74
ATG4D-212ENST00000590096 ZNF70Q9UC06 446 aaPredicted RBP25.95■■□□□ 1.74
ATG4D-212ENST00000590096 NDUFB9Q9Y6M9 179 aa25.95■■□□□ 1.74
ATG4D-212ENST00000590096 TRPM7Q96QT4 1865 aa25.95■■□□□ 1.74
ATG4D-212ENST00000590096 NEFLP07196 543 aa25.94■■□□□ 1.74
ATG4D-212ENST00000590096 FMR1Q06787 632 aaKnown RBP eCLIP25.94■■□□□ 1.74
ATG4D-212ENST00000590096 TTF1Q15361 905 aaPredicted RBP25.94■■□□□ 1.74
ATG4D-212ENST00000590096 APOBEC3HQ6NTF7 200 aaKnown RBP25.94■■□□□ 1.74
ATG4D-212ENST00000590096 BOLA2Q9H3K6 86 aa25.94■■□□□ 1.74
ATG4D-212ENST00000590096 PIH1D3Q9NQM4 214 aaKnown RBP25.94■■□□□ 1.74
ATG4D-212ENST00000590096 TMOD2Q9NZR1 351 aa25.94■■□□□ 1.74
ATG4D-212ENST00000590096 SCAF8Q9UPN6 1271 aaKnown RBP25.94■■□□□ 1.74
ATG4D-212ENST00000590096 AOX1Q06278 1338 aa25.93■■□□□ 1.74
ATG4D-212ENST00000590096 MAST2Q6P0Q8 1798 aa25.93■■□□□ 1.74
ATG4D-212ENST00000590096 IGSF3O75054 1194 aa25.93■■□□□ 1.74
ATG4D-212ENST00000590096 LDHCP07864 332 aa25.93■■□□□ 1.74
ATG4D-212ENST00000590096 TNFAIP1Q13829 316 aa25.93■■□□□ 1.74
ATG4D-212ENST00000590096 B4GALNT3Q6L9W6 998 aa25.93■■□□□ 1.74
ATG4D-212ENST00000590096 NSUN4Q96CB9 384 aaKnown RBP25.93■■□□□ 1.74
ATG4D-212ENST00000590096 ZNF408Q9H9D4 720 aa25.93■■□□□ 1.74
ATG4D-212ENST00000590096 PCNTO95613 3336 aa25.93■■□□□ 1.74
ATG4D-212ENST00000590096 MROH7-TTC4A0A0A0MT08 1334 aa25.92■■□□□ 1.74
ATG4D-212ENST00000590096 GAKO14976 1311 aa25.92■■□□□ 1.74
ATG4D-212ENST00000590096 TMEM88BA6NKF7 163 aa25.92■■□□□ 1.74
ATG4D-212ENST00000590096 IDH1O75874 414 aaKnown RBP25.92■■□□□ 1.74
ATG4D-212ENST00000590096 CELF2O95319 508 aaKnown RBP25.92■■□□□ 1.74
ATG4D-212ENST00000590096 MYO5AQ9Y4I1 1855 aaKnown RBP25.91■■□□□ 1.74
ATG4D-212ENST00000590096 NAA16Q6N069 864 aaPredicted RBP25.91■■□□□ 1.74
ATG4D-212ENST00000590096 DLK2Q6UY11 383 aa25.91■■□□□ 1.74
ATG4D-212ENST00000590096 CDCA5Q96FF9 252 aa25.91■■□□□ 1.74
ATG4D-212ENST00000590096 FAM163AQ96GL9 167 aaPredicted RBP25.91■■□□□ 1.74
ATG4D-212ENST00000590096 ANTXR1Q9H6X2 564 aa25.91■■□□□ 1.74
ATG4D-212ENST00000590096 TTC41PQ6P2S7 1318 aa25.9■■□□□ 1.74
ATG4D-212ENST00000590096 GOLIM4O00461 696 aa25.9■■□□□ 1.74
ATG4D-212ENST00000590096 TNNI2P48788 182 aa25.9■■□□□ 1.74
ATG4D-212ENST00000590096 MAP3K12Q12852 859 aa25.9■■□□□ 1.74
ATG4D-212ENST00000590096 HAUS7Q99871 368 aa25.9■■□□□ 1.74
ATG4D-212ENST00000590096 DEFB129Q9H1M3 183 aa25.9■■□□□ 1.74
ATG4D-212ENST00000590096 CREBZFQ9NS37 354 aa25.9■■□□□ 1.74
ATG4D-212ENST00000590096 PAG1Q9NWQ8 432 aa25.9■■□□□ 1.74
ATG4D-212ENST00000590096 PPP2R3BQ9Y5P8 575 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms