RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 ELP3Q9H9T3 547 aa17.59■□□□□ 0.41
SF3A2-205ENST00000590034 IQSEC3Q9UPP2 1182 aaPredicted RBP17.59■□□□□ 0.41
SF3A2-205ENST00000590034 TESPA1A2RU30 521 aaPredicted RBP17.58■□□□□ 0.4
SF3A2-205ENST00000590034 ANP32CO43423 234 aa17.58■□□□□ 0.4
SF3A2-205ENST00000590034 CRKP46108 304 aa17.58■□□□□ 0.4
SF3A2-205ENST00000590034 TNFAIP1Q13829 316 aa17.58■□□□□ 0.4
SF3A2-205ENST00000590034 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.58■□□□□ 0.4
SF3A2-205ENST00000590034 CD99L2Q8TCZ2 262 aa17.58■□□□□ 0.4
SF3A2-205ENST00000590034 OPTNQ96CV9 577 aa17.58■□□□□ 0.4
SF3A2-205ENST00000590034 TMEM39BQ9GZU3 492 aa17.58■□□□□ 0.4
SF3A2-205ENST00000590034 BICC1Q9H694 974 aaKnown RBP17.58■□□□□ 0.4
SF3A2-205ENST00000590034 POTEFA5A3E0 1075 aa17.57■□□□□ 0.4
SF3A2-205ENST00000590034 TCP10L2B9ZVM9 353 aa17.57■□□□□ 0.4
SF3A2-205ENST00000590034 RABL6Q3YEC7 729 aaPredicted RBP17.57■□□□□ 0.4
SF3A2-205ENST00000590034 LRRC24Q50LG9 513 aa17.57■□□□□ 0.4
SF3A2-205ENST00000590034 FBXO33Q7Z6M2 555 aa17.57■□□□□ 0.4
SF3A2-205ENST00000590034 ANKRD44Q8N8A2 993 aa17.57■□□□□ 0.4
SF3A2-205ENST00000590034 VGLL2Q8N8G2 317 aa17.57■□□□□ 0.4
SF3A2-205ENST00000590034 MS4A4AQ96JQ5 239 aa17.57■□□□□ 0.4
SF3A2-205ENST00000590034 MROH5Q6ZUA9 1318 aa17.56■□□□□ 0.4
SF3A2-205ENST00000590034 ZNF521Q96K83 1311 aa17.56■□□□□ 0.4
SF3A2-205ENST00000590034 VGLL4Q14135 290 aa17.56■□□□□ 0.4
SF3A2-205ENST00000590034 PTPN22Q9Y2R2 807 aa17.56■□□□□ 0.4
SF3A2-205ENST00000590034 ZSWIM8A7E2V4 1837 aa17.56■□□□□ 0.4
SF3A2-205ENST00000590034 MYH13Q9UKX3 1938 aa17.55■□□□□ 0.4
SF3A2-205ENST00000590034 CACNB3P54284 484 aa17.55■□□□□ 0.4
SF3A2-205ENST00000590034 CHAF1AQ13111 956 aaPredicted RBP17.55■□□□□ 0.4
SF3A2-205ENST00000590034 FAM9BQ8IZU0 186 aa17.55■□□□□ 0.4
SF3A2-205ENST00000590034 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.55■□□□□ 0.4
SF3A2-205ENST00000590034 BRI3BPQ8WY22 251 aa17.55■□□□□ 0.4
SF3A2-205ENST00000590034 ERO1AQ96HE7 468 aa17.55■□□□□ 0.4
SF3A2-205ENST00000590034 OTUD7BQ6GQQ9 843 aa17.54■□□□□ 0.4
SF3A2-205ENST00000590034 MRPL50Q8N5N7 158 aaKnown RBP17.54■□□□□ 0.4
SF3A2-205ENST00000590034 KLHDC4Q8TBB5 520 aa17.54■□□□□ 0.4
SF3A2-205ENST00000590034 PCDH10Q9P2E7 1040 aa17.54■□□□□ 0.4
SF3A2-205ENST00000590034 SP3Q02447 781 aa17.53■□□□□ 0.4
SF3A2-205ENST00000590034 METTL24Q5JXM2 366 aa17.53■□□□□ 0.4
SF3A2-205ENST00000590034 ARMC5Q96C12 935 aa17.53■□□□□ 0.4
SF3A2-205ENST00000590034 EFCC1Q9HA90 598 aa17.53■□□□□ 0.4
SF3A2-205ENST00000590034 PDE8BO95263 885 aa17.52■□□□□ 0.4
SF3A2-205ENST00000590034 BCAMP50895 628 aa17.52■□□□□ 0.4
SF3A2-205ENST00000590034 MAP3K9P80192 1104 aa17.52■□□□□ 0.4
SF3A2-205ENST00000590034 HDLBPQ00341 1268 aaKnown RBP17.52■□□□□ 0.4
SF3A2-205ENST00000590034 VPS37DQ86XT2 251 aa17.52■□□□□ 0.4
SF3A2-205ENST00000590034 FAM43AQ8N2R8 423 aa17.52■□□□□ 0.4
SF3A2-205ENST00000590034 CCL15-CCL14A0A0B4J2E2 113 aa17.51■□□□□ 0.39
SF3A2-205ENST00000590034 TNNI2P48788 182 aa17.51■□□□□ 0.39
SF3A2-205ENST00000590034 CCL15Q16663 113 aa17.51■□□□□ 0.39
SF3A2-205ENST00000590034 INTS3Q68E01 1043 aaKnown RBP17.51■□□□□ 0.39
SF3A2-205ENST00000590034 TBC1D22AQ8WUA7 517 aa17.51■□□□□ 0.39
SF3A2-205ENST00000590034 TEKT1Q969V4 418 aa17.51■□□□□ 0.39
SF3A2-205ENST00000590034 OTUD5Q96G74 571 aa17.51■□□□□ 0.39
SF3A2-205ENST00000590034 SNCAIPQ9Y6H5 919 aa17.51■□□□□ 0.39
SF3A2-205ENST00000590034 TAF1CQ15572 869 aaPredicted RBP17.5■□□□□ 0.39
SF3A2-205ENST00000590034 CAVIN4Q5BKX8 364 aa17.5■□□□□ 0.39
SF3A2-205ENST00000590034 APOBEC3HQ6NTF7 200 aaKnown RBP17.5■□□□□ 0.39
SF3A2-205ENST00000590034 ZDHHC15Q96MV8 337 aa17.5■□□□□ 0.39
SF3A2-205ENST00000590034 USP44Q9H0E7 712 aa17.5■□□□□ 0.39
SF3A2-205ENST00000590034 CSADQ9Y600 493 aa17.5■□□□□ 0.39
SF3A2-205ENST00000590034 SPDYE5A6NIY4 337 aa17.49■□□□□ 0.39
SF3A2-205ENST00000590034 FGFR2P21802 821 aa17.49■□□□□ 0.39
SF3A2-205ENST00000590034 GTF2A2P52657 109 aa17.49■□□□□ 0.39
SF3A2-205ENST00000590034 PTPRCP08575 1304 aa17.48■□□□□ 0.39
SF3A2-205ENST00000590034 ZNF316A6NFI3 1004 aaPredicted RBP17.48■□□□□ 0.39
SF3A2-205ENST00000590034 FRAT2O75474 233 aaPredicted RBP17.48■□□□□ 0.39
SF3A2-205ENST00000590034 EN2P19622 333 aaPredicted RBP17.48■□□□□ 0.39
SF3A2-205ENST00000590034 RFX5P48382 616 aaPredicted RBP17.48■□□□□ 0.39
SF3A2-205ENST00000590034 SSH1Q8WYL5 1049 aa17.48■□□□□ 0.39
SF3A2-205ENST00000590034 ZKSCAN4Q969J2 545 aaPredicted RBP17.48■□□□□ 0.39
SF3A2-205ENST00000590034 KIF16BQ96L93 1317 aa17.47■□□□□ 0.39
SF3A2-205ENST00000590034 PUM3Q15397 648 aaKnown RBP17.47■□□□□ 0.39
SF3A2-205ENST00000590034 FAM83AQ86UY5 434 aa17.47■□□□□ 0.39
SF3A2-205ENST00000590034 ZNF333Q96JL9 665 aa17.47■□□□□ 0.39
SF3A2-205ENST00000590034 WRNIP1Q96S55 665 aa17.47■□□□□ 0.39
SF3A2-205ENST00000590034 MRIQ9BWK5 157 aa17.47■□□□□ 0.39
SF3A2-205ENST00000590034 ZFYVE28Q9HCC9 887 aa17.47■□□□□ 0.39
SF3A2-205ENST00000590034 PTCH2Q9Y6C5 1203 aa17.47■□□□□ 0.39
SF3A2-205ENST00000590034 RPAP1Q9BWH6 1393 aaPredicted RBP17.47■□□□□ 0.39
SF3A2-205ENST00000590034 IRF6O14896 467 aa17.46■□□□□ 0.39
SF3A2-205ENST00000590034 FKBP1CQ5VVH2 108 aa17.46■□□□□ 0.39
SF3A2-205ENST00000590034 ARHGAP39Q9C0H5 1083 aa17.46■□□□□ 0.39
SF3A2-205ENST00000590034 AK9Q5TCS8 1911 aa17.45■□□□□ 0.38
SF3A2-205ENST00000590034 BTBD19C9JJ37 291 aa17.45■□□□□ 0.38
SF3A2-205ENST00000590034 IFIT1P09914 478 aaKnown RBP17.45■□□□□ 0.38
SF3A2-205ENST00000590034 HHIPL2Q6UWX4 724 aa17.45■□□□□ 0.38
SF3A2-205ENST00000590034 ERO1BQ86YB8 467 aa17.45■□□□□ 0.38
SF3A2-205ENST00000590034 TMOD2Q9NZR1 351 aa17.45■□□□□ 0.38
SF3A2-205ENST00000590034 SUGT1Q9Y2Z0 365 aa17.45■□□□□ 0.38
SF3A2-205ENST00000590034 CEP290O15078 2479 aa17.45■□□□□ 0.38
SF3A2-205ENST00000590034 MAST3O60307 1309 aa17.45■□□□□ 0.38
SF3A2-205ENST00000590034 EYA2O00167 538 aa17.44■□□□□ 0.38
SF3A2-205ENST00000590034 TLR2O60603 784 aa17.44■□□□□ 0.38
SF3A2-205ENST00000590034 INPP5BP32019 993 aa17.44■□□□□ 0.38
SF3A2-205ENST00000590034 MIGA2Q7L4E1 593 aa17.44■□□□□ 0.38
SF3A2-205ENST00000590034 ATG9AQ7Z3C6 839 aa17.44■□□□□ 0.38
SF3A2-205ENST00000590034 CETPP11597 493 aa17.43■□□□□ 0.38
SF3A2-205ENST00000590034 PPIL2Q13356 520 aa17.43■□□□□ 0.38
SF3A2-205ENST00000590034 SNAPC2Q13487 334 aa17.43■□□□□ 0.38
SF3A2-205ENST00000590034 DIXDC1Q155Q3 683 aa17.43■□□□□ 0.38
SF3A2-205ENST00000590034 SLC9C1Q4G0N8 1177 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms