RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 CT47B1P0C2W7 299 aaPredicted RBP22.56■■□□□ 1.2
H3F3B-209ENST00000589949 RARSP54136 660 aaKnown RBP22.56■■□□□ 1.2
H3F3B-209ENST00000589949 CTU1Q7Z7A3 348 aaKnown RBP22.56■■□□□ 1.2
H3F3B-209ENST00000589949 WNK4Q96J92 1243 aa22.56■■□□□ 1.2
H3F3B-209ENST00000589949 TMEM39BQ9GZU3 492 aa22.56■■□□□ 1.2
H3F3B-209ENST00000589949 UBTFL1P0CB47 393 aaPredicted RBP22.55■■□□□ 1.2
H3F3B-209ENST00000589949 CACNB3P54284 484 aa22.55■■□□□ 1.2
H3F3B-209ENST00000589949 SREBF2Q12772 1141 aa22.55■■□□□ 1.2
H3F3B-209ENST00000589949 SIL1Q9H173 461 aa22.55■■□□□ 1.2
H3F3B-209ENST00000589949 GPR25O00155 361 aa22.54■■□□□ 1.2
H3F3B-209ENST00000589949 FRAT2O75474 233 aaPredicted RBP22.54■■□□□ 1.2
H3F3B-209ENST00000589949 IFIT1P09914 478 aaKnown RBP22.54■■□□□ 1.2
H3F3B-209ENST00000589949 MEIS3Q99687 375 aa22.54■■□□□ 1.2
H3F3B-209ENST00000589949 LRRFIP2Q9Y608 721 aaKnown RBP22.54■■□□□ 1.2
H3F3B-209ENST00000589949 KIF16BQ96L93 1317 aa22.54■■□□□ 1.2
H3F3B-209ENST00000589949 OTOFQ9HC10 1997 aa22.53■■□□□ 1.2
H3F3B-209ENST00000589949 IGF2BP3O00425 579 aaKnown RBP eCLIP22.53■■□□□ 1.2
H3F3B-209ENST00000589949 HDLBPQ00341 1268 aaKnown RBP22.53■■□□□ 1.2
H3F3B-209ENST00000589949 TBC1D22AQ8WUA7 517 aa22.53■■□□□ 1.2
H3F3B-209ENST00000589949 CFHR5Q9BXR6 569 aa22.53■■□□□ 1.2
H3F3B-209ENST00000589949 PA2G4Q9UQ80 394 aaKnown RBP22.53■■□□□ 1.2
H3F3B-209ENST00000589949 IREB2P48200 963 aaKnown RBP22.52■■□□□ 1.2
H3F3B-209ENST00000589949 TNFAIP1Q13829 316 aa22.52■■□□□ 1.2
H3F3B-209ENST00000589949 APOBEC3HQ6NTF7 200 aaKnown RBP22.52■■□□□ 1.2
H3F3B-209ENST00000589949 IFNL1Q8IU54 200 aa22.52■■□□□ 1.2
H3F3B-209ENST00000589949 LPIN2Q92539 896 aa22.52■■□□□ 1.2
H3F3B-209ENST00000589949 API5Q9BZZ5 524 aaKnown RBP22.52■■□□□ 1.2
H3F3B-209ENST00000589949 MANSC4A6NHS7 340 aaPredicted RBP22.51■■□□□ 1.19
H3F3B-209ENST00000589949 ZBTB48P10074 688 aaPredicted RBP22.51■■□□□ 1.19
H3F3B-209ENST00000589949 MLLT1Q03111 559 aaPredicted RBP22.51■■□□□ 1.19
H3F3B-209ENST00000589949 NOM1Q5C9Z4 860 aaKnown RBP22.51■■□□□ 1.19
H3F3B-209ENST00000589949 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.51■■□□□ 1.19
H3F3B-209ENST00000589949 CNKSR2Q8WXI2 1034 aa22.51■■□□□ 1.19
H3F3B-209ENST00000589949 TEKT1Q969V4 418 aa22.51■■□□□ 1.19
H3F3B-209ENST00000589949 ZDHHC15Q96MV8 337 aa22.51■■□□□ 1.19
H3F3B-209ENST00000589949 TNNQ9UQP3 1299 aa22.51■■□□□ 1.19
H3F3B-209ENST00000589949 LAMB1P07942 1786 aa22.5■■□□□ 1.19
H3F3B-209ENST00000589949 TNRC18O15417 2968 aaPredicted RBP22.5■■□□□ 1.19
H3F3B-209ENST00000589949 UNCXA6NJT0 531 aa22.5■■□□□ 1.19
H3F3B-209ENST00000589949 CIAO1O76071 339 aa22.5■■□□□ 1.19
H3F3B-209ENST00000589949 SLC5A1P13866 664 aa22.5■■□□□ 1.19
H3F3B-209ENST00000589949 ANKRD13AQ8IZ07 590 aa22.5■■□□□ 1.19
H3F3B-209ENST00000589949 PTPN18Q99952 460 aa22.5■■□□□ 1.19
H3F3B-209ENST00000589949 ELP3Q9H9T3 547 aa22.5■■□□□ 1.19
H3F3B-209ENST00000589949 MRIQ9BWK5 157 aa22.49■■□□□ 1.19
H3F3B-209ENST00000589949 SOX10P56693 466 aa22.48■■□□□ 1.19
H3F3B-209ENST00000589949 ATP2B3Q16720 1220 aa22.48■■□□□ 1.19
H3F3B-209ENST00000589949 INTS3Q68E01 1043 aaKnown RBP22.48■■□□□ 1.19
H3F3B-209ENST00000589949 HPS5Q9UPZ3 1129 aa22.48■■□□□ 1.19
H3F3B-209ENST00000589949 ADORA1P30542 326 aa22.47■■□□□ 1.19
H3F3B-209ENST00000589949 INHBEP58166 350 aa22.47■■□□□ 1.19
H3F3B-209ENST00000589949 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.47■■□□□ 1.193e-35■□□□□ 9.6
H3F3B-209ENST00000589949 OPTNQ96CV9 577 aa22.47■■□□□ 1.19
H3F3B-209ENST00000589949 MS4A4AQ96JQ5 239 aa22.47■■□□□ 1.19
H3F3B-209ENST00000589949 CEP126Q9P2H0 1117 aa22.47■■□□□ 1.19
H3F3B-209ENST00000589949 FBXO3Q9UK99 471 aa22.47■■□□□ 1.19
H3F3B-209ENST00000589949 SUGT1Q9Y2Z0 365 aa22.47■■□□□ 1.19
H3F3B-209ENST00000589949 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.47■■□□□ 1.19
H3F3B-209ENST00000589949 TESPA1A2RU30 521 aaPredicted RBP22.46■■□□□ 1.19
H3F3B-209ENST00000589949 FKTNO75072 461 aa22.46■■□□□ 1.19
H3F3B-209ENST00000589949 PHKA1P46020 1223 aa22.46■■□□□ 1.19
H3F3B-209ENST00000589949 VGLL4Q14135 290 aa22.46■■□□□ 1.19
H3F3B-209ENST00000589949 DIXDC1Q155Q3 683 aa22.46■■□□□ 1.19
H3F3B-209ENST00000589949 HHIPL2Q6UWX4 724 aa22.46■■□□□ 1.19
H3F3B-209ENST00000589949 ARHGAP45Q92619 1136 aa22.46■■□□□ 1.19
H3F3B-209ENST00000589949 COPRSQ9NQ92 184 aa22.46■■□□□ 1.19
H3F3B-209ENST00000589949 HTTP42858 3142 aa22.46■■□□□ 1.19
H3F3B-209ENST00000589949 BCAR3O75815 825 aa22.45■■□□□ 1.18
H3F3B-209ENST00000589949 ALDH1A1P00352 501 aa22.45■■□□□ 1.18
H3F3B-209ENST00000589949 PRDX5P30044 214 aa22.45■■□□□ 1.18
H3F3B-209ENST00000589949 TNNI2P48788 182 aa22.45■■□□□ 1.18
H3F3B-209ENST00000589949 WDR66Q8TBY9 1149 aa22.45■■□□□ 1.18
H3F3B-209ENST00000589949 TRIM27P14373 513 aa22.44■■□□□ 1.18
H3F3B-209ENST00000589949 IL15P40933 162 aaPredicted RBP22.44■■□□□ 1.18
H3F3B-209ENST00000589949 MAP3K9P80192 1104 aa22.44■■□□□ 1.18
H3F3B-209ENST00000589949 CAP1Q01518 475 aa22.44■■□□□ 1.18
H3F3B-209ENST00000589949 MYH13Q9UKX3 1938 aa22.44■■□□□ 1.18
H3F3B-209ENST00000589949 DAGLAQ9Y4D2 1042 aa22.44■■□□□ 1.18
H3F3B-209ENST00000589949 MAST3O60307 1309 aa22.43■■□□□ 1.18
H3F3B-209ENST00000589949 CRHR2Q13324 411 aa22.43■■□□□ 1.18
H3F3B-209ENST00000589949 PKN2Q16513 984 aaKnown RBP22.43■■□□□ 1.18
H3F3B-209ENST00000589949 FKBP1CQ5VVH2 108 aa22.43■■□□□ 1.18
H3F3B-209ENST00000589949 FAM83AQ86UY5 434 aa22.43■■□□□ 1.18
H3F3B-209ENST00000589949 BRI3BPQ8WY22 251 aa22.43■■□□□ 1.18
H3F3B-209ENST00000589949 TIMM10P62072 90 aa22.42■■□□□ 1.18
H3F3B-209ENST00000589949 CDC42EP5Q6NZY7 148 aa22.42■■□□□ 1.18
H3F3B-209ENST00000589949 SNCAIPQ9Y6H5 919 aa22.42■■□□□ 1.18
H3F3B-209ENST00000589949 NFIAQ12857 509 aa22.41■■□□□ 1.18
H3F3B-209ENST00000589949 MTX1Q13505 466 aa22.41■■□□□ 1.18
H3F3B-209ENST00000589949 CCDC102BQ68D86 513 aa22.41■■□□□ 1.18
H3F3B-209ENST00000589949 FBXO46Q6PJ61 603 aaPredicted RBP22.41■■□□□ 1.18
H3F3B-209ENST00000589949 ZKSCAN4Q969J2 545 aaPredicted RBP22.41■■□□□ 1.18
H3F3B-209ENST00000589949 SRGAP3O43295 1099 aa22.4■■□□□ 1.18
H3F3B-209ENST00000589949 OTUD5Q96G74 571 aa22.4■■□□□ 1.18
H3F3B-209ENST00000589949 TMOD2Q9NZR1 351 aa22.4■■□□□ 1.18
H3F3B-209ENST00000589949 SALL1Q9NSC2 1324 aa22.39■■□□□ 1.18
H3F3B-209ENST00000589949 GNAI3P08754 354 aa22.39■■□□□ 1.17
H3F3B-209ENST00000589949 TFCP2Q12800 502 aa22.39■■□□□ 1.17
H3F3B-209ENST00000589949 RASGRF1Q13972 1273 aa22.39■■□□□ 1.17
H3F3B-209ENST00000589949 MIGA2Q7L4E1 593 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms