RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 TBC1D22AQ8WUA7 517 aa20.88■□□□□ 0.93
CXXC1-212ENST00000589940 KCNB2Q92953 911 aa20.88■□□□□ 0.93
CXXC1-212ENST00000589940 LDHBP07195 334 aaKnown RBP20.88■□□□□ 0.93
CXXC1-212ENST00000589940 KIAA2012Q0VF49 1180 aa20.88■□□□□ 0.93
CXXC1-212ENST00000589940 CREB3L3Q68CJ9 461 aa20.88■□□□□ 0.93
CXXC1-212ENST00000589940 PODNQ7Z5L7 613 aa20.88■□□□□ 0.93
CXXC1-212ENST00000589940 BRCA1P38398 1863 aaKnown RBP20.87■□□□□ 0.93
CXXC1-212ENST00000589940 RNF20Q5VTR2 975 aa20.87■□□□□ 0.93
CXXC1-212ENST00000589940 SNX14Q9Y5W7 946 aa20.87■□□□□ 0.93
CXXC1-212ENST00000589940 MAST2Q6P0Q8 1798 aa20.86■□□□□ 0.93
CXXC1-212ENST00000589940 MBD4O95243 580 aa20.86■□□□□ 0.93
CXXC1-212ENST00000589940 ADGRA1Q86SQ6 560 aa20.86■□□□□ 0.93
CXXC1-212ENST00000589940 DZIP1Q86YF9 867 aaKnown RBP20.86■□□□□ 0.93
CXXC1-212ENST00000589940 RASEFQ8IZ41 740 aa20.86■□□□□ 0.93
CXXC1-212ENST00000589940 STRBPQ96SI9 672 aaKnown RBP20.86■□□□□ 0.93
CXXC1-212ENST00000589940 FOXP2O15409 715 aa20.86■□□□□ 0.93
CXXC1-212ENST00000589940 ZKSCAN1P17029 563 aaPredicted RBP20.86■□□□□ 0.93
CXXC1-212ENST00000589940 GTF2IP78347 998 aa20.86■□□□□ 0.93
CXXC1-212ENST00000589940 MFSD14BQ5SR56 506 aa20.86■□□□□ 0.93
CXXC1-212ENST00000589940 SLC27A2O14975 620 aa20.85■□□□□ 0.93
CXXC1-212ENST00000589940 AOC3Q16853 763 aa20.85■□□□□ 0.93
CXXC1-212ENST00000589940 DBNDD1Q9H9R9 158 aa20.85■□□□□ 0.93
CXXC1-212ENST00000589940 MIGA1Q8NAN2 632 aa20.85■□□□□ 0.93
CXXC1-212ENST00000589940 CHD4Q14839 1912 aa20.84■□□□□ 0.93
CXXC1-212ENST00000589940 PPIP5K2O43314 1243 aa20.84■□□□□ 0.93
CXXC1-212ENST00000589940 ARMT1Q9H993 441 aa20.84■□□□□ 0.93
CXXC1-212ENST00000589940 MAGEB6P1A0A0J9YX57 407 aa20.84■□□□□ 0.93
CXXC1-212ENST00000589940 ECE2O60344 883 aa20.84■□□□□ 0.93
CXXC1-212ENST00000589940 BECN1Q14457 450 aa20.84■□□□□ 0.93
CXXC1-212ENST00000589940 GRIK5Q16478 980 aa20.84■□□□□ 0.93
CXXC1-212ENST00000589940 TTLL5Q6EMB2 1281 aa20.84■□□□□ 0.93
CXXC1-212ENST00000589940 LCORLQ8N3X6 602 aa20.84■□□□□ 0.93
CXXC1-212ENST00000589940 CCDC88AQ3V6T2 1871 aa20.84■□□□□ 0.93
CXXC1-212ENST00000589940 GNAT2P19087 354 aa20.83■□□□□ 0.93
CXXC1-212ENST00000589940 GSTO1P78417 241 aa20.83■□□□□ 0.93
CXXC1-212ENST00000589940 VPS33BQ9H267 617 aa20.83■□□□□ 0.93
CXXC1-212ENST00000589940 CTNNA3Q9UI47 895 aa20.83■□□□□ 0.93
CXXC1-212ENST00000589940 TSGA10IPQ3SY00 556 aa20.82■□□□□ 0.92
CXXC1-212ENST00000589940 NLGN2Q8NFZ4 835 aa20.82■□□□□ 0.92
CXXC1-212ENST00000589940 FBXW7Q969H0 707 aa20.82■□□□□ 0.92
CXXC1-212ENST00000589940 SNX21Q969T3 373 aa20.82■□□□□ 0.92
CXXC1-212ENST00000589940 RIOK1Q9BRS2 568 aaKnown RBP20.82■□□□□ 0.92
CXXC1-212ENST00000589940 SUGT1Q9Y2Z0 365 aa20.82■□□□□ 0.92
CXXC1-212ENST00000589940 BCS1LQ9Y276 419 aa20.82■□□□□ 0.92
CXXC1-212ENST00000589940 FGAP02671 866 aa20.81■□□□□ 0.92
CXXC1-212ENST00000589940 CYP21A2P08686 494 aa20.81■□□□□ 0.92
CXXC1-212ENST00000589940 PATL2C9JE40 543 aaKnown RBP20.81■□□□□ 0.92
CXXC1-212ENST00000589940 TBC1D2Q9BYX2 928 aa20.81■□□□□ 0.92
CXXC1-212ENST00000589940 ZNF277Q9NRM2 450 aaPredicted RBP20.81■□□□□ 0.92
CXXC1-212ENST00000589940 APPP05067 770 aa20.8■□□□□ 0.92
CXXC1-212ENST00000589940 STRIP1Q5VSL9 837 aa20.8■□□□□ 0.92
CXXC1-212ENST00000589940 IL27Q8NEV9 243 aa20.8■□□□□ 0.92
CXXC1-212ENST00000589940 TM6SF1Q9BZW5 370 aa20.8■□□□□ 0.92
CXXC1-212ENST00000589940 ST18O60284 1047 aa20.8■□□□□ 0.92
CXXC1-212ENST00000589940 LDHCP07864 332 aa20.8■□□□□ 0.92
CXXC1-212ENST00000589940 KRT32Q14532 448 aa20.8■□□□□ 0.92
CXXC1-212ENST00000589940 DIXDC1Q155Q3 683 aa20.8■□□□□ 0.92
CXXC1-212ENST00000589940 ALX1Q15699 326 aa20.8■□□□□ 0.92
CXXC1-212ENST00000589940 CERS5Q8N5B7 392 aa20.8■□□□□ 0.92
CXXC1-212ENST00000589940 KCNQ5Q9NR82 932 aa20.8■□□□□ 0.92
CXXC1-212ENST00000589940 TAF6LQ9Y6J9 622 aa20.8■□□□□ 0.92
CXXC1-212ENST00000589940 SLC4A4Q9Y6R1 1079 aa20.8■□□□□ 0.92
CXXC1-212ENST00000589940 ZMYM6O95789 1325 aa20.79■□□□□ 0.92
CXXC1-212ENST00000589940 RPAP1Q9BWH6 1393 aaPredicted RBP20.79■□□□□ 0.92
CXXC1-212ENST00000589940 NEK4P51957 841 aa20.79■□□□□ 0.92
CXXC1-212ENST00000589940 DYNLL1P63167 89 aaKnown RBP20.79■□□□□ 0.92
CXXC1-212ENST00000589940 ADCK5Q3MIX3 580 aa20.79■□□□□ 0.92
CXXC1-212ENST00000589940 HSCBQ8IWL3 235 aa20.79■□□□□ 0.92
CXXC1-212ENST00000589940 SLF2Q8IX21 1173 aa20.79■□□□□ 0.92
CXXC1-212ENST00000589940 LARGE2Q8N3Y3 721 aa20.79■□□□□ 0.92
CXXC1-212ENST00000589940 JAKMIP1Q96N16 626 aaKnown RBP20.79■□□□□ 0.92
CXXC1-212ENST00000589940 TAOK3Q9H2K8 898 aa20.79■□□□□ 0.92
CXXC1-212ENST00000589940 DAXXQ9UER7 740 aaPredicted RBP20.79■□□□□ 0.92
CXXC1-212ENST00000589940 GSG1L2A8MUP6 293 aa20.78■□□□□ 0.92
CXXC1-212ENST00000589940 FKBP1AP62942 108 aaKnown RBP20.78■□□□□ 0.92
CXXC1-212ENST00000589940 IMMTQ16891 758 aaKnown RBP20.78■□□□□ 0.92
CXXC1-212ENST00000589940 UPF3BQ9BZI7 483 aaKnown RBP20.78■□□□□ 0.92
CXXC1-212ENST00000589940 AATFQ9NY61 560 aaKnown RBP eCLIP20.78■□□□□ 0.923e-6■■■■■ 33.9
CXXC1-212ENST00000589940 MROH7-TTC4A0A0A0MT08 1334 aa20.78■□□□□ 0.92
CXXC1-212ENST00000589940 USP17L3A6NCW0 530 aa20.78■□□□□ 0.92
CXXC1-212ENST00000589940 USP17L4A6NCW7 530 aa20.78■□□□□ 0.92
CXXC1-212ENST00000589940 PRKAB2O43741 272 aa20.78■□□□□ 0.92
CXXC1-212ENST00000589940 CD2BP2O95400 341 aaKnown RBP20.78■□□□□ 0.92
CXXC1-212ENST00000589940 USP17L1Q7RTZ2 530 aa20.78■□□□□ 0.92
CXXC1-212ENST00000589940 IFNL3Q8IZI9 196 aa20.78■□□□□ 0.92
CXXC1-212ENST00000589940 NACAP1Q9BZK3 213 aa20.78■□□□□ 0.92
CXXC1-212ENST00000589940 FHDC1Q9C0D6 1143 aaPredicted RBP20.78■□□□□ 0.92
CXXC1-212ENST00000589940 EPB41L4AQ9HCS5 686 aaPredicted RBP20.78■□□□□ 0.92
CXXC1-212ENST00000589940 FER1L6Q2WGJ9 1857 aa20.77■□□□□ 0.92
CXXC1-212ENST00000589940 CASTP20810 708 aaKnown RBP20.77■□□□□ 0.92
CXXC1-212ENST00000589940 PSMA5P28066 241 aa20.77■□□□□ 0.92
CXXC1-212ENST00000589940 DACT2Q5SW24 774 aa20.77■□□□□ 0.92
CXXC1-212ENST00000589940 FAM163AQ96GL9 167 aaPredicted RBP20.77■□□□□ 0.92
CXXC1-212ENST00000589940 SCN9AQ15858 1988 aa20.77■□□□□ 0.92
CXXC1-212ENST00000589940 IARSP41252 1262 aaKnown RBP20.77■□□□□ 0.91
CXXC1-212ENST00000589940 MXD3Q9BW11 206 aa20.77■□□□□ 0.91
CXXC1-212ENST00000589940 ZSWIM6Q9HCJ5 1215 aa20.77■□□□□ 0.91
CXXC1-212ENST00000589940 YDJCA8MPS7 323 aa20.76■□□□□ 0.91
CXXC1-212ENST00000589940 NFKBIEO00221 500 aa20.76■□□□□ 0.91
CXXC1-212ENST00000589940 BAG3O95817 575 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms