RNA–Protein interactions for RNA: ENST00000589878.5

LSM14A-207, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 4

Gene LSM14A, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-207ENST00000589878 OTUD5Q96G74 571 aa23.31■■□□□ 1.32
LSM14A-207ENST00000589878 TEPSINQ96N21 525 aa23.31■■□□□ 1.32
LSM14A-207ENST00000589878 TMEM39BQ9GZU3 492 aa23.31■■□□□ 1.32
LSM14A-207ENST00000589878 GYG1P46976 350 aa23.3■■□□□ 1.32
LSM14A-207ENST00000589878 GTF2A2P52657 109 aa23.3■■□□□ 1.32
LSM14A-207ENST00000589878 MAP3K9P80192 1104 aa23.3■■□□□ 1.32
LSM14A-207ENST00000589878 VGLL4Q14135 290 aa23.3■■□□□ 1.32
LSM14A-207ENST00000589878 DZIP1LQ8IYY4 767 aaKnown RBP23.3■■□□□ 1.32
LSM14A-207ENST00000589878 FAM43AQ8N2R8 423 aa23.3■■□□□ 1.32
LSM14A-207ENST00000589878 FAM205AQ6ZU69 1335 aa23.3■■□□□ 1.32
LSM14A-207ENST00000589878 ECM2O94769 699 aaPredicted RBP23.29■■□□□ 1.32
LSM14A-207ENST00000589878 SERPINA10Q9UK55 444 aa23.29■■□□□ 1.32
LSM14A-207ENST00000589878 CSADQ9Y600 493 aa23.29■■□□□ 1.32
LSM14A-207ENST00000589878 ZSWIM8A7E2V4 1837 aa23.29■■□□□ 1.32
LSM14A-207ENST00000589878 HIBADHP31937 336 aaKnown RBP23.28■■□□□ 1.32
LSM14A-207ENST00000589878 TDRD7Q8NHU6 1098 aaKnown RBP23.28■■□□□ 1.32
LSM14A-207ENST00000589878 SH3TC2Q8TF17 1288 aa23.28■■□□□ 1.32
LSM14A-207ENST00000589878 CACNA1FO60840 1977 aa23.27■■□□□ 1.32
LSM14A-207ENST00000589878 CRKP46108 304 aa23.27■■□□□ 1.32
LSM14A-207ENST00000589878 TNNI2P48788 182 aa23.27■■□□□ 1.32
LSM14A-207ENST00000589878 ARHGAP39Q9C0H5 1083 aa23.27■■□□□ 1.32
LSM14A-207ENST00000589878 CCDC27Q2M243 656 aa23.26■■□□□ 1.31
LSM14A-207ENST00000589878 BEND3Q5T5X7 828 aa23.26■■□□□ 1.31
LSM14A-207ENST00000589878 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.26■■□□□ 1.31
LSM14A-207ENST00000589878 FAM84BQ96KN1 310 aaPredicted RBP23.26■■□□□ 1.31
LSM14A-207ENST00000589878 ARAP2Q8WZ64 1704 aa23.25■■□□□ 1.31
LSM14A-207ENST00000589878 H0YGN5 161 aa23.25■■□□□ 1.31
LSM14A-207ENST00000589878 CACNB3P54284 484 aa23.25■■□□□ 1.31
LSM14A-207ENST00000589878 GRIK5Q16478 980 aa23.25■■□□□ 1.31
LSM14A-207ENST00000589878 IQSEC3Q9UPP2 1182 aaPredicted RBP23.25■■□□□ 1.31
LSM14A-207ENST00000589878 VAMP4O75379 141 aa23.24■■□□□ 1.31
LSM14A-207ENST00000589878 WDHD1O75717 1129 aaPredicted RBP23.24■■□□□ 1.31
LSM14A-207ENST00000589878 UBE4AQ14139 1066 aa23.24■■□□□ 1.31
LSM14A-207ENST00000589878 KIF22Q14807 665 aa23.24■■□□□ 1.31
LSM14A-207ENST00000589878 CCDC184Q52MB2 194 aa23.24■■□□□ 1.31
LSM14A-207ENST00000589878 PUS3Q9BZE2 481 aaKnown RBP23.24■■□□□ 1.31
LSM14A-207ENST00000589878 FANCIQ9NVI1 1328 aa23.24■■□□□ 1.31
LSM14A-207ENST00000589878 GRM8O00222 908 aa23.23■■□□□ 1.31
LSM14A-207ENST00000589878 CHAF1AQ13111 956 aaPredicted RBP23.23■■□□□ 1.31
LSM14A-207ENST00000589878 C9orf78Q9NZ63 289 aaPredicted RBP23.23■■□□□ 1.31
LSM14A-207ENST00000589878 SALL2Q9Y467 1007 aaPredicted RBP23.23■■□□□ 1.31
LSM14A-207ENST00000589878 IL16Q14005 1332 aa23.23■■□□□ 1.31
LSM14A-207ENST00000589878 SPDYE5A6NIY4 337 aa23.22■■□□□ 1.31
LSM14A-207ENST00000589878 TLR2O60603 784 aa23.22■■□□□ 1.31
LSM14A-207ENST00000589878 CETPP11597 493 aa23.22■■□□□ 1.31
LSM14A-207ENST00000589878 EXOSC9Q06265 439 aaKnown RBP23.22■■□□□ 1.31
LSM14A-207ENST00000589878 ZKSCAN4Q969J2 545 aaPredicted RBP23.22■■□□□ 1.31
LSM14A-207ENST00000589878 BTBD19C9JJ37 291 aa23.21■■□□□ 1.31
LSM14A-207ENST00000589878 LACTBP83111 547 aaPredicted RBP23.21■■□□□ 1.31
LSM14A-207ENST00000589878 VPS37DQ86XT2 251 aa23.21■■□□□ 1.31
LSM14A-207ENST00000589878 WRNIP1Q96S55 665 aa23.21■■□□□ 1.31
LSM14A-207ENST00000589878 SNCAIPQ9Y6H5 919 aa23.21■■□□□ 1.31
LSM14A-207ENST00000589878 FRAT2O75474 233 aaPredicted RBP23.2■■□□□ 1.3
LSM14A-207ENST00000589878 ERO1BQ86YB8 467 aa23.2■■□□□ 1.3
LSM14A-207ENST00000589878 IRF6O14896 467 aa23.19■■□□□ 1.3
LSM14A-207ENST00000589878 SNAPC2Q13487 334 aa23.18■■□□□ 1.3
LSM14A-207ENST00000589878 SLC4A10Q6U841 1118 aa23.18■■□□□ 1.3
LSM14A-207ENST00000589878 CHRDL2Q6WN34 429 aa23.18■■□□□ 1.3
LSM14A-207ENST00000589878 DPF3Q92784 378 aa23.18■■□□□ 1.3
LSM14A-207ENST00000589878 CEP290O15078 2479 aa23.18■■□□□ 1.3
LSM14A-207ENST00000589878 MTFR1Q15390 333 aa23.17■■□□□ 1.3
LSM14A-207ENST00000589878 TEKT1Q969V4 418 aa23.17■■□□□ 1.3
LSM14A-207ENST00000589878 SUCLG2Q96I99 432 aa23.17■■□□□ 1.3
LSM14A-207ENST00000589878 CPA4Q9UI42 421 aa23.17■■□□□ 1.3
LSM14A-207ENST00000589878 FBXO33Q7Z6M2 555 aa23.16■■□□□ 1.3
LSM14A-207ENST00000589878 TMOD2Q9NZR1 351 aa23.16■■□□□ 1.3
LSM14A-207ENST00000589878 RIPOR2Q9Y4F9 1068 aa23.16■■□□□ 1.3
LSM14A-207ENST00000589878 CTGFP29279 349 aa23.15■■□□□ 1.3
LSM14A-207ENST00000589878 PPIL2Q13356 520 aa23.15■■□□□ 1.3
LSM14A-207ENST00000589878 MIGA2Q7L4E1 593 aa23.15■■□□□ 1.3
LSM14A-207ENST00000589878 ZCCHC17Q9NP64 241 aaKnown RBP23.15■■□□□ 1.3
LSM14A-207ENST00000589878 TRIOBPQ9H2D6 2365 aa23.15■■□□□ 1.3
LSM14A-207ENST00000589878 MROH5Q6ZUA9 1318 aa23.14■■□□□ 1.3
LSM14A-207ENST00000589878 GNRH1P01148 92 aa23.14■■□□□ 1.29
LSM14A-207ENST00000589878 PSMC4P43686 418 aa23.14■■□□□ 1.29
LSM14A-207ENST00000589878 HDLBPQ00341 1268 aaKnown RBP23.14■■□□□ 1.29
LSM14A-207ENST00000589878 CAVIN4Q5BKX8 364 aa23.14■■□□□ 1.29
LSM14A-207ENST00000589878 C17orf99Q6UX52 265 aa23.14■■□□□ 1.29
LSM14A-207ENST00000589878 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.14■■□□□ 1.29
LSM14A-207ENST00000589878 TBC1D22AQ8WUA7 517 aa23.14■■□□□ 1.29
LSM14A-207ENST00000589878 SHISA4Q96DD7 197 aa23.14■■□□□ 1.29
LSM14A-207ENST00000589878 ALDH1L1O75891 902 aa23.13■■□□□ 1.29
LSM14A-207ENST00000589878 FMNL1O95466 1100 aaPredicted RBP23.13■■□□□ 1.29
LSM14A-207ENST00000589878 PRMT2P55345 433 aa23.13■■□□□ 1.29
LSM14A-207ENST00000589878 LRRC24Q50LG9 513 aa23.13■■□□□ 1.29
LSM14A-207ENST00000589878 METTL24Q5JXM2 366 aa23.13■■□□□ 1.29
LSM14A-207ENST00000589878 HOOK2Q96ED9 719 aa23.13■■□□□ 1.29
LSM14A-207ENST00000589878 KAZALD1Q96I82 304 aa23.13■■□□□ 1.29
LSM14A-207ENST00000589878 TRIM47Q96LD4 638 aa23.13■■□□□ 1.29
LSM14A-207ENST00000589878 ZDHHC15Q96MV8 337 aa23.13■■□□□ 1.29
LSM14A-207ENST00000589878 SRCIN1Q9C0H9 1055 aa23.13■■□□□ 1.29
LSM14A-207ENST00000589878 INPP5BP32019 993 aa23.12■■□□□ 1.29
LSM14A-207ENST00000589878 BCAMP50895 628 aa23.12■■□□□ 1.29
LSM14A-207ENST00000589878 DCAF15Q66K64 600 aa23.12■■□□□ 1.29
LSM14A-207ENST00000589878 APOBEC3HQ6NTF7 200 aaKnown RBP23.12■■□□□ 1.29
LSM14A-207ENST00000589878 FAM83AQ86UY5 434 aa23.12■■□□□ 1.29
LSM14A-207ENST00000589878 RAET1EQ8TD07 263 aa23.12■■□□□ 1.29
LSM14A-207ENST00000589878 RBM27Q9P2N5 1060 aaKnown RBP23.12■■□□□ 1.29
LSM14A-207ENST00000589878 SRRDQ9UH36 339 aa23.12■■□□□ 1.29
LSM14A-207ENST00000589878 PDHXO00330 501 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms