RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 FAM43AQ8N2R8 423 aa22.79■■□□□ 1.24
CXXC1-211ENST00000589548 SERPINA10Q9UK55 444 aa22.79■■□□□ 1.24
CXXC1-211ENST00000589548 CCL15-CCL14A0A0B4J2E2 113 aa22.78■■□□□ 1.24
CXXC1-211ENST00000589548 GYG1P46976 350 aa22.78■■□□□ 1.24
CXXC1-211ENST00000589548 TAF1CQ15572 869 aaPredicted RBP22.78■■□□□ 1.24
CXXC1-211ENST00000589548 CCL15Q16663 113 aa22.78■■□□□ 1.24
CXXC1-211ENST00000589548 DZIP1LQ8IYY4 767 aaKnown RBP22.78■■□□□ 1.24
CXXC1-211ENST00000589548 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.78■■□□□ 1.246e-7■■■■■ 42.5
CXXC1-211ENST00000589548 TMEM39BQ9GZU3 492 aa22.78■■□□□ 1.24
CXXC1-211ENST00000589548 TCP10L2B9ZVM9 353 aa22.77■■□□□ 1.24
CXXC1-211ENST00000589548 GRIK5Q16478 980 aa22.77■■□□□ 1.24
CXXC1-211ENST00000589548 TMEM106CQ9BVX2 250 aa22.77■■□□□ 1.24
CXXC1-211ENST00000589548 CNNM1Q9NRU3 951 aa22.77■■□□□ 1.24
CXXC1-211ENST00000589548 CRKP46108 304 aa22.76■■□□□ 1.23
CXXC1-211ENST00000589548 CCDC57Q2TAC2 916 aa22.76■■□□□ 1.23
CXXC1-211ENST00000589548 SLC9C1Q4G0N8 1177 aa22.76■■□□□ 1.23
CXXC1-211ENST00000589548 FAM84BQ96KN1 310 aaPredicted RBP22.76■■□□□ 1.23
CXXC1-211ENST00000589548 GRM8O00222 908 aa22.75■■□□□ 1.23
CXXC1-211ENST00000589548 GTF2A2P52657 109 aa22.75■■□□□ 1.23
CXXC1-211ENST00000589548 MAP3K9P80192 1104 aa22.75■■□□□ 1.23
CXXC1-211ENST00000589548 UBE4AQ14139 1066 aa22.75■■□□□ 1.23
CXXC1-211ENST00000589548 TAF7LQ5H9L4 462 aa22.75■■□□□ 1.23
CXXC1-211ENST00000589548 OTUD5Q96G74 571 aa22.75■■□□□ 1.23
CXXC1-211ENST00000589548 PUS3Q9BZE2 481 aaKnown RBP22.75■■□□□ 1.23
CXXC1-211ENST00000589548 ARHGAP39Q9C0H5 1083 aa22.75■■□□□ 1.23
CXXC1-211ENST00000589548 ZFYVE28Q9HCC9 887 aa22.75■■□□□ 1.23
CXXC1-211ENST00000589548 HIBADHP31937 336 aaKnown RBP22.74■■□□□ 1.23
CXXC1-211ENST00000589548 EXOSC9Q06265 439 aaKnown RBP22.74■■□□□ 1.23
CXXC1-211ENST00000589548 MYCP01106 439 aaPredicted RBP22.73■■□□□ 1.23
CXXC1-211ENST00000589548 COLQQ9Y215 455 aaPredicted RBP22.73■■□□□ 1.23
CXXC1-211ENST00000589548 SNCAIPQ9Y6H5 919 aa22.73■■□□□ 1.23
CXXC1-211ENST00000589548 SPDYE5A6NIY4 337 aa22.72■■□□□ 1.23
CXXC1-211ENST00000589548 CACNB3P54284 484 aa22.72■■□□□ 1.23
CXXC1-211ENST00000589548 CSADQ9Y600 493 aa22.72■■□□□ 1.23
CXXC1-211ENST00000589548 MYH13Q9UKX3 1938 aa22.72■■□□□ 1.23
CXXC1-211ENST00000589548 SLC4A8Q2Y0W8 1093 aa22.71■■□□□ 1.23
CXXC1-211ENST00000589548 NBPF11Q86T75 865 aa22.71■■□□□ 1.23
CXXC1-211ENST00000589548 SH3TC2Q8TF17 1288 aa22.71■■□□□ 1.23
CXXC1-211ENST00000589548 KAZALD1Q96I82 304 aa22.71■■□□□ 1.23
CXXC1-211ENST00000589548 IQSEC3Q9UPP2 1182 aaPredicted RBP22.71■■□□□ 1.23
CXXC1-211ENST00000589548 TNNI2P48788 182 aa22.7■■□□□ 1.22
CXXC1-211ENST00000589548 ARHGEF6Q15052 776 aa22.7■■□□□ 1.22
CXXC1-211ENST00000589548 NCBP3Q53F19 620 aaKnown RBP22.7■■□□□ 1.22
CXXC1-211ENST00000589548 SUCLG2Q96I99 432 aa22.7■■□□□ 1.22
CXXC1-211ENST00000589548 BTBD19C9JJ37 291 aa22.69■■□□□ 1.22
CXXC1-211ENST00000589548 TLR2O60603 784 aa22.69■■□□□ 1.22
CXXC1-211ENST00000589548 LACTBP83111 547 aaPredicted RBP22.69■■□□□ 1.22
CXXC1-211ENST00000589548 FBXO33Q7Z6M2 555 aa22.69■■□□□ 1.22
CXXC1-211ENST00000589548 RIPOR2Q9Y4F9 1068 aa22.69■■□□□ 1.22
CXXC1-211ENST00000589548 SZT2Q5T011 3432 aa22.69■■□□□ 1.22
CXXC1-211ENST00000589548 CHAF1AQ13111 956 aaPredicted RBP22.68■■□□□ 1.22
CXXC1-211ENST00000589548 SPINK5Q9NQ38 1064 aaPredicted RBP22.68■■□□□ 1.22
CXXC1-211ENST00000589548 C9orf78Q9NZ63 289 aaPredicted RBP22.68■■□□□ 1.22
CXXC1-211ENST00000589548 H0YGN5 161 aa22.67■■□□□ 1.22
CXXC1-211ENST00000589548 IRF6O14896 467 aa22.67■■□□□ 1.22
CXXC1-211ENST00000589548 CETPP11597 493 aa22.67■■□□□ 1.22
CXXC1-211ENST00000589548 ERO1BQ86YB8 467 aa22.67■■□□□ 1.22
CXXC1-211ENST00000589548 ZKSCAN4Q969J2 545 aaPredicted RBP22.67■■□□□ 1.22
CXXC1-211ENST00000589548 WRNIP1Q96S55 665 aa22.67■■□□□ 1.22
CXXC1-211ENST00000589548 AK9Q5TCS8 1911 aa22.67■■□□□ 1.22
CXXC1-211ENST00000589548 MGAMO43451 1857 aa22.66■■□□□ 1.22
CXXC1-211ENST00000589548 ALDH1L1O75891 902 aa22.66■■□□□ 1.22
CXXC1-211ENST00000589548 CTGFP29279 349 aa22.66■■□□□ 1.22
CXXC1-211ENST00000589548 HDLBPQ00341 1268 aaKnown RBP22.66■■□□□ 1.22
CXXC1-211ENST00000589548 WDR63Q8IWG1 891 aa22.66■■□□□ 1.22
CXXC1-211ENST00000589548 SHISA4Q96DD7 197 aa22.66■■□□□ 1.22
CXXC1-211ENST00000589548 ZCCHC17Q9NP64 241 aaKnown RBP22.66■■□□□ 1.22
CXXC1-211ENST00000589548 SALL2Q9Y467 1007 aaPredicted RBP22.66■■□□□ 1.22
CXXC1-211ENST00000589548 MROH5Q6ZUA9 1318 aa22.65■■□□□ 1.22
CXXC1-211ENST00000589548 TEKT1Q969V4 418 aa22.65■■□□□ 1.22
CXXC1-211ENST00000589548 RPAP1Q9BWH6 1393 aaPredicted RBP22.64■■□□□ 1.22
CXXC1-211ENST00000589548 RANBP2P49792 3224 aaKnown RBP22.64■■□□□ 1.22
CXXC1-211ENST00000589548 ECM2O94769 699 aaPredicted RBP22.64■■□□□ 1.21
CXXC1-211ENST00000589548 NBPF7P0C2Y1 421 aaPredicted RBP22.64■■□□□ 1.21
CXXC1-211ENST00000589548 PPIL2Q13356 520 aa22.64■■□□□ 1.21
CXXC1-211ENST00000589548 SNAPC2Q13487 334 aa22.64■■□□□ 1.21
CXXC1-211ENST00000589548 LRRC24Q50LG9 513 aa22.64■■□□□ 1.21
CXXC1-211ENST00000589548 APOBEC3HQ6NTF7 200 aaKnown RBP22.64■■□□□ 1.21
CXXC1-211ENST00000589548 SLC4A10Q6U841 1118 aa22.64■■□□□ 1.21
CXXC1-211ENST00000589548 VGLL2Q8N8G2 317 aa22.64■■□□□ 1.21
CXXC1-211ENST00000589548 ZDHHC15Q96MV8 337 aa22.64■■□□□ 1.21
CXXC1-211ENST00000589548 KIF22Q14807 665 aa22.63■■□□□ 1.21
CXXC1-211ENST00000589548 MTFR1Q15390 333 aa22.63■■□□□ 1.21
CXXC1-211ENST00000589548 FAM83AQ86UY5 434 aa22.63■■□□□ 1.21
CXXC1-211ENST00000589548 VPS37DQ86XT2 251 aa22.63■■□□□ 1.21
CXXC1-211ENST00000589548 TBC1D22AQ8WUA7 517 aa22.63■■□□□ 1.21
CXXC1-211ENST00000589548 SRCIN1Q9C0H9 1055 aa22.63■■□□□ 1.21
CXXC1-211ENST00000589548 ADGRA2Q96PE1 1338 aa22.62■■□□□ 1.21
CXXC1-211ENST00000589548 C17orf99Q6UX52 265 aa22.62■■□□□ 1.21
CXXC1-211ENST00000589548 BICC1Q9H694 974 aaKnown RBP22.62■■□□□ 1.21
CXXC1-211ENST00000589548 UTYO14607 1347 aa22.61■■□□□ 1.21
CXXC1-211ENST00000589548 WDHD1O75717 1129 aaPredicted RBP22.61■■□□□ 1.21
CXXC1-211ENST00000589548 GNRH1P01148 92 aa22.61■■□□□ 1.21
CXXC1-211ENST00000589548 INPP5BP32019 993 aa22.61■■□□□ 1.21
CXXC1-211ENST00000589548 BCAMP50895 628 aa22.61■■□□□ 1.21
CXXC1-211ENST00000589548 RABL6Q3YEC7 729 aaPredicted RBP22.61■■□□□ 1.21
CXXC1-211ENST00000589548 FKBP1CQ5VVH2 108 aa22.61■■□□□ 1.21
CXXC1-211ENST00000589548 ANKRD44Q8N8A2 993 aa22.61■■□□□ 1.21
CXXC1-211ENST00000589548 CPA4Q9UI42 421 aa22.61■■□□□ 1.21
CXXC1-211ENST00000589548 PRMT2P55345 433 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms