RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 WNK4Q96J92 1243 aa29.81■■■□□ 2.36
LSM7-205ENST00000589532 TDRD3Q9H7E2 651 aaKnown RBP29.81■■■□□ 2.36
LSM7-205ENST00000589532 GPR25O00155 361 aa29.8■■■□□ 2.36
LSM7-205ENST00000589532 USP2O75604 605 aaPredicted RBP29.8■■■□□ 2.36
LSM7-205ENST00000589532 CT47B1P0C2W7 299 aaPredicted RBP29.8■■■□□ 2.36
LSM7-205ENST00000589532 TNFAIP1Q13829 316 aa29.8■■■□□ 2.36
LSM7-205ENST00000589532 R3HDMLQ9H3Y0 253 aa29.8■■■□□ 2.36
LSM7-205ENST00000589532 PUM3Q15397 648 aaKnown RBP29.79■■■□□ 2.36
LSM7-205ENST00000589532 TBC1D22AQ8WUA7 517 aa29.79■■■□□ 2.36
LSM7-205ENST00000589532 MANSC4A6NHS7 340 aaPredicted RBP29.78■■■□□ 2.36
LSM7-205ENST00000589532 EYA2O00167 538 aa29.78■■■□□ 2.36
LSM7-205ENST00000589532 GJA5P36382 358 aa29.78■■■□□ 2.36
LSM7-205ENST00000589532 BCAMP50895 628 aa29.78■■■□□ 2.36
LSM7-205ENST00000589532 HDLBPQ00341 1268 aaKnown RBP29.78■■■□□ 2.36
LSM7-205ENST00000589532 CAVIN4Q5BKX8 364 aa29.78■■■□□ 2.36
LSM7-205ENST00000589532 VPS37DQ86XT2 251 aa29.78■■■□□ 2.36
LSM7-205ENST00000589532 SLC10A4Q96EP9 437 aa29.78■■■□□ 2.36
LSM7-205ENST00000589532 CHAF1AQ13111 956 aaPredicted RBP29.77■■■□□ 2.36
LSM7-205ENST00000589532 ATG9AQ7Z3C6 839 aa29.77■■■□□ 2.36
LSM7-205ENST00000589532 IGF2BP3O00425 579 aaKnown RBP eCLIP29.76■■■□□ 2.35
LSM7-205ENST00000589532 IREB2P48200 963 aaKnown RBP29.76■■■□□ 2.35
LSM7-205ENST00000589532 HNRNPUQ00839 825 aaKnown RBP eCLIP29.76■■■□□ 2.35
LSM7-205ENST00000589532 IFNL1Q8IU54 200 aa29.75■■■□□ 2.35
LSM7-205ENST00000589532 ANKRD13AQ8IZ07 590 aa29.75■■■□□ 2.35
LSM7-205ENST00000589532 ALDH1A1P00352 501 aa29.74■■■□□ 2.35
LSM7-205ENST00000589532 INHBEP58166 350 aa29.74■■■□□ 2.35
LSM7-205ENST00000589532 TMEM39BQ9GZU3 492 aa29.74■■■□□ 2.35
LSM7-205ENST00000589532 HPS5Q9UPZ3 1129 aa29.74■■■□□ 2.35
LSM7-205ENST00000589532 PKN2Q16513 984 aaKnown RBP29.73■■■□□ 2.35
LSM7-205ENST00000589532 NOB1Q9ULX3 412 aaKnown RBP29.73■■■□□ 2.35
LSM7-205ENST00000589532 SUGT1Q9Y2Z0 365 aa29.73■■■□□ 2.35
LSM7-205ENST00000589532 TCP10L2B9ZVM9 353 aa29.72■■■□□ 2.35
LSM7-205ENST00000589532 IFIT1P09914 478 aaKnown RBP29.72■■■□□ 2.35
LSM7-205ENST00000589532 UBTFL1P0CB47 393 aaPredicted RBP29.72■■■□□ 2.35
LSM7-205ENST00000589532 LPIN2Q92539 896 aa29.72■■■□□ 2.35
LSM7-205ENST00000589532 TEKT1Q969V4 418 aa29.72■■■□□ 2.35
LSM7-205ENST00000589532 ZDHHC15Q96MV8 337 aa29.72■■■□□ 2.35
LSM7-205ENST00000589532 MRIQ9BWK5 157 aa29.72■■■□□ 2.35
LSM7-205ENST00000589532 FBXO3Q9UK99 471 aa29.72■■■□□ 2.35
LSM7-205ENST00000589532 TESPA1A2RU30 521 aaPredicted RBP29.71■■■□□ 2.35
LSM7-205ENST00000589532 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.71■■■□□ 2.35
LSM7-205ENST00000589532 RPAP1Q9BWH6 1393 aaPredicted RBP29.71■■■□□ 2.35
LSM7-205ENST00000589532 CENPFP49454 3210 aa29.71■■■□□ 2.35
LSM7-205ENST00000589532 PDE4DIPQ5VU43 2346 aa29.71■■■□□ 2.35
LSM7-205ENST00000589532 FKTNO75072 461 aa29.7■■■□□ 2.35
LSM7-205ENST00000589532 FRAT2O75474 233 aaPredicted RBP29.7■■■□□ 2.35
LSM7-205ENST00000589532 CIAO1O76071 339 aa29.7■■■□□ 2.35
LSM7-205ENST00000589532 SOX10P56693 466 aa29.7■■■□□ 2.35
LSM7-205ENST00000589532 APOBEC3HQ6NTF7 200 aaKnown RBP29.7■■■□□ 2.35
LSM7-205ENST00000589532 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.7■■■□□ 2.352e-14■■■■□ 20.5
LSM7-205ENST00000589532 API5Q9BZZ5 524 aaKnown RBP29.7■■■□□ 2.35
LSM7-205ENST00000589532 SLC5A1P13866 664 aa29.69■■■□□ 2.34
LSM7-205ENST00000589532 TNNI2P48788 182 aa29.69■■■□□ 2.34
LSM7-205ENST00000589532 CACNB3P54284 484 aa29.69■■■□□ 2.34
LSM7-205ENST00000589532 MAST3O60307 1309 aa29.69■■■□□ 2.34
LSM7-205ENST00000589532 RARSP54136 660 aaKnown RBP29.68■■■□□ 2.34
LSM7-205ENST00000589532 PTPN18Q99952 460 aa29.68■■■□□ 2.34
LSM7-205ENST00000589532 ELP3Q9H9T3 547 aa29.68■■■□□ 2.34
LSM7-205ENST00000589532 FKBP1CQ5VVH2 108 aa29.67■■■□□ 2.34
LSM7-205ENST00000589532 HHIPL2Q6UWX4 724 aa29.67■■■□□ 2.34
LSM7-205ENST00000589532 OPTNQ96CV9 577 aa29.67■■■□□ 2.34
LSM7-205ENST00000589532 MS4A4AQ96JQ5 239 aa29.67■■■□□ 2.34
LSM7-205ENST00000589532 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.67■■■□□ 2.34
LSM7-205ENST00000589532 LRRFIP2Q9Y608 721 aaKnown RBP29.67■■■□□ 2.34
LSM7-205ENST00000589532 VGLL4Q14135 290 aa29.66■■■□□ 2.34
LSM7-205ENST00000589532 FBXO46Q6PJ61 603 aaPredicted RBP29.66■■■□□ 2.34
LSM7-205ENST00000589532 FAM83AQ86UY5 434 aa29.66■■■□□ 2.34
LSM7-205ENST00000589532 CNKSR2Q8WXI2 1034 aa29.66■■■□□ 2.34
LSM7-205ENST00000589532 MEIS3Q99687 375 aa29.66■■■□□ 2.34
LSM7-205ENST00000589532 SIL1Q9H173 461 aa29.66■■■□□ 2.34
LSM7-205ENST00000589532 ZBTB22O15209 634 aa29.65■■■□□ 2.34
LSM7-205ENST00000589532 BRCA2P51587 3418 aa29.64■■■□□ 2.34
LSM7-205ENST00000589532 CRHR2Q13324 411 aa29.64■■■□□ 2.34
LSM7-205ENST00000589532 ATP2B3Q16720 1220 aa29.64■■■□□ 2.34
LSM7-205ENST00000589532 WDR66Q8TBY9 1149 aa29.64■■■□□ 2.34
LSM7-205ENST00000589532 COPRSQ9NQ92 184 aa29.63■■■□□ 2.33
LSM7-205ENST00000589532 PA2G4Q9UQ80 394 aaKnown RBP29.63■■■□□ 2.33
LSM7-205ENST00000589532 IL15P40933 162 aaPredicted RBP29.62■■■□□ 2.33
LSM7-205ENST00000589532 MAP3K9P80192 1104 aa29.62■■■□□ 2.33
LSM7-205ENST00000589532 INTS3Q68E01 1043 aaKnown RBP29.62■■■□□ 2.33
LSM7-205ENST00000589532 ARHGAP45Q92619 1136 aa29.62■■■□□ 2.33
LSM7-205ENST00000589532 SNCAIPQ9Y6H5 919 aa29.62■■■□□ 2.33
LSM7-205ENST00000589532 ZBED9Q6R2W3 1325 aa29.62■■■□□ 2.33
LSM7-205ENST00000589532 SALL1Q9NSC2 1324 aa29.62■■■□□ 2.33
LSM7-205ENST00000589532 PRDX5P30044 214 aa29.61■■■□□ 2.33
LSM7-205ENST00000589532 BRI3BPQ8WY22 251 aa29.61■■■□□ 2.33
LSM7-205ENST00000589532 DAGLAQ9Y4D2 1042 aa29.61■■■□□ 2.33
LSM7-205ENST00000589532 SPDYE5A6NIY4 337 aa29.6■■■□□ 2.33
LSM7-205ENST00000589532 TMOD2Q9NZR1 351 aa29.6■■■□□ 2.33
LSM7-205ENST00000589532 CEP126Q9P2H0 1117 aa29.6■■■□□ 2.33
LSM7-205ENST00000589532 PHKA1P46020 1223 aa29.59■■■□□ 2.33
LSM7-205ENST00000589532 MTX1Q13505 466 aa29.59■■■□□ 2.33
LSM7-205ENST00000589532 DIXDC1Q155Q3 683 aa29.59■■■□□ 2.33
LSM7-205ENST00000589532 OTOP1Q7RTM1 612 aa29.59■■■□□ 2.33
LSM7-205ENST00000589532 MKI67P46013 3256 aaKnown RBP29.58■■■□□ 2.33
LSM7-205ENST00000589532 CAP1Q01518 475 aa29.58■■■□□ 2.33
LSM7-205ENST00000589532 RBBP6Q7Z6E9 1792 aaKnown RBP29.57■■■□□ 2.32
LSM7-205ENST00000589532 RFX7Q2KHR2 1363 aa29.57■■■□□ 2.32
LSM7-205ENST00000589532 SEMA3EO15041 775 aa29.57■■■□□ 2.32
LSM7-205ENST00000589532 OTUD7BQ6GQQ9 843 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms