RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 HSD3B2P26439 372 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 SLC20A2Q08357 652 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 SAFB2Q14151 953 aaKnown RBP eCLIP3.93□□□□□ -1.78
LINC01539-203ENST00000589447 TPD52L1Q16890 204 aaPredicted RBP3.93□□□□□ -1.78
LINC01539-203ENST00000589447 TEX35Q5T0J7 233 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 C6orf132Q5T0Z8 1188 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 RNF187Q5TA31 235 aaPredicted RBP3.93□□□□□ -1.78
LINC01539-203ENST00000589447 CEP135Q66GS9 1140 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 ZSCAN29Q8IWY8 852 aaPredicted RBP3.93□□□□□ -1.78
LINC01539-203ENST00000589447 C17orf53Q8N3J3 647 aaPredicted RBP3.93□□□□□ -1.78
LINC01539-203ENST00000589447 SPC24Q8NBT2 197 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 STK32AQ8WU08 396 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 SPIRE2Q8WWL2 714 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 WNT2BQ93097 391 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 ERO1AQ96HE7 468 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 COG3Q96JB2 828 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 PHACTR3Q96KR7 559 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 C16orf45Q96MC5 204 aaPredicted RBP3.93□□□□□ -1.78
LINC01539-203ENST00000589447 TIGD1Q96MW7 591 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 MEIS3Q99687 375 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 THUMPD2Q9BTF0 503 aaKnown RBP3.93□□□□□ -1.78
LINC01539-203ENST00000589447 CDK19Q9BWU1 502 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 STK31Q9BXU1 1019 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 TGIF2Q9GZN2 237 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 SCAND2PQ9GZW5 306 aaPredicted RBP3.93□□□□□ -1.78
LINC01539-203ENST00000589447 TNMDQ9H2S6 317 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 METTL5Q9NRN9 209 aaKnown RBP3.93□□□□□ -1.78
LINC01539-203ENST00000589447 ARGLU1Q9NWB6 273 aaPredicted RBP3.93□□□□□ -1.78
LINC01539-203ENST00000589447 PLA2G2EQ9NZK7 142 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 CHPF2Q9P2E5 772 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 PALD1Q9ULE6 856 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 PYCARDQ9ULZ3 195 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 NOVA2Q9UNW9 492 aaKnown RBP3.93□□□□□ -1.78
LINC01539-203ENST00000589447 MORC2Q9Y6X9 1032 aaPredicted RBP3.93□□□□□ -1.78
LINC01539-203ENST00000589447 NHSQ6T4R5 1651 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 NPHP3Q7Z494 1330 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 TTC21BQ7Z4L5 1316 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 PRR36Q9H6K5 1346 aa3.93□□□□□ -1.78
LINC01539-203ENST00000589447 UTRNP46939 3433 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 MAP3K5Q99683 1374 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 CHD4Q14839 1912 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 VPS37CA5D8V6 355 aaPredicted RBP3.92□□□□□ -1.78
LINC01539-203ENST00000589447 HIP1O00291 1037 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 CHL1O00533 1208 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 CTAGE5O15320 804 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 MAP3K7O43318 606 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 PEX14O75381 377 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 SLU7O95391 586 aaKnown RBP3.92□□□□□ -1.78
LINC01539-203ENST00000589447 PTGS1P23219 599 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 GJB2P29033 226 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 SERPINB4P48594 390 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 ZNF75DP51815 510 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 AK2P54819 239 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 GSDMDP57764 484 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 TPM4P67936 248 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 ATP8B2P98198 1209 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 TYRO3Q06418 890 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 SEMA3FQ13275 785 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 GNL2Q13823 731 aaKnown RBP3.92□□□□□ -1.78
LINC01539-203ENST00000589447 BMS1Q14692 1282 aaKnown RBP3.92□□□□□ -1.78
LINC01539-203ENST00000589447 ANKRD1Q15327 319 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 TERF2Q15554 542 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 PTPN14Q15678 1187 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 FAM98CQ17RN3 349 aaKnown RBP3.92□□□□□ -1.78
LINC01539-203ENST00000589447 FOXD4L6Q3SYB3 417 aaPredicted RBP3.92□□□□□ -1.78
LINC01539-203ENST00000589447 VPS53Q5VIR6 699 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 ZSCAN25Q6NSZ9 544 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 ZNF746Q6NUN9 644 aaPredicted RBP3.92□□□□□ -1.78
LINC01539-203ENST00000589447 SARM1Q6SZW1 724 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 FOXD4L3Q6VB84 417 aaPredicted RBP3.92□□□□□ -1.78
LINC01539-203ENST00000589447 CCDC186Q7Z3E2 898 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 APBB1IPQ7Z5R6 666 aaPredicted RBP3.92□□□□□ -1.78
LINC01539-203ENST00000589447 PLA2G4DQ86XP0 818 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 RNF135Q8IUD6 432 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.92□□□□□ -1.78
LINC01539-203ENST00000589447 NLGN1Q8N2Q7 840 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 NME8Q8N427 588 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 TDRD7Q8NHU6 1098 aaKnown RBP3.92□□□□□ -1.78
LINC01539-203ENST00000589447 KIF18AQ8NI77 898 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 IPO4Q8TEX9 1081 aaKnown RBP3.92□□□□□ -1.78
LINC01539-203ENST00000589447 TSC1Q92574 1164 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 DDX12PQ92771 950 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 MRFAP1L1Q96HT8 127 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 CHAMP1Q96JM3 812 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 UPF3BQ9BZI7 483 aaKnown RBP3.92□□□□□ -1.78
LINC01539-203ENST00000589447 TM6SF1Q9BZW5 370 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 TRIM5Q9C035 493 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 CLSTN2Q9H4D0 955 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 GEMIN8Q9NWZ8 242 aaKnown RBP3.92□□□□□ -1.78
LINC01539-203ENST00000589447 CABP1Q9NZU7 370 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 STK26Q9P289 416 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 CLIP2Q9UDT6 1046 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 EXOC6BQ9Y2D4 811 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 SNX14Q9Y5W7 946 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 CYP46A1Q9Y6A2 500 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 MRVI1Q9Y6F6 885 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 CRB1P82279 1406 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 QSER1Q2KHR3 1735 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 TOGARAM1Q9Y4F4 1720 aa3.92□□□□□ -1.78
LINC01539-203ENST00000589447 TTC41PQ6P2S7 1318 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms