RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 LPIN2Q92539 896 aa13.17□□□□□ -0.3
CLPTM1-211ENST00000589347 FAM84BQ96KN1 310 aaPredicted RBP13.17□□□□□ -0.3
CLPTM1-211ENST00000589347 SIL1Q9H173 461 aa13.17□□□□□ -0.3
CLPTM1-211ENST00000589347 JAG2Q9Y219 1238 aa13.17□□□□□ -0.3
CLPTM1-211ENST00000589347 RANBP2P49792 3224 aaKnown RBP13.17□□□□□ -0.3
CLPTM1-211ENST00000589347 GNAI2P04899 355 aa13.16□□□□□ -0.3
CLPTM1-211ENST00000589347 CHAF1AQ13111 956 aaPredicted RBP13.16□□□□□ -0.3
CLPTM1-211ENST00000589347 TNFAIP1Q13829 316 aa13.16□□□□□ -0.3
CLPTM1-211ENST00000589347 TTLL12Q14166 644 aaPredicted RBP13.16□□□□□ -0.3
CLPTM1-211ENST00000589347 ATP2B3Q16720 1220 aa13.16□□□□□ -0.3
CLPTM1-211ENST00000589347 CFAP100Q494V2 611 aa13.16□□□□□ -0.3
CLPTM1-211ENST00000589347 FBXO46Q6PJ61 603 aaPredicted RBP13.16□□□□□ -0.3
CLPTM1-211ENST00000589347 ZNF296Q8WUU4 475 aaPredicted RBP13.16□□□□□ -0.3
CLPTM1-211ENST00000589347 GNL3LQ9NVN8 582 aaKnown RBP13.16□□□□□ -0.3
CLPTM1-211ENST00000589347 CEP126Q9P2H0 1117 aa13.16□□□□□ -0.3
CLPTM1-211ENST00000589347 TTF2Q9UNY4 1162 aaKnown RBP13.16□□□□□ -0.3
CLPTM1-211ENST00000589347 DOCK2Q92608 1830 aa13.16□□□□□ -0.3
CLPTM1-211ENST00000589347 MAST2Q6P0Q8 1798 aa13.15□□□□□ -0.3
CLPTM1-211ENST00000589347 SPDYE2BA6NHP3 402 aa13.15□□□□□ -0.3
CLPTM1-211ENST00000589347 SRGAP3O43295 1099 aa13.15□□□□□ -0.3
CLPTM1-211ENST00000589347 SPDYE6P0CI01 402 aa13.15□□□□□ -0.3
CLPTM1-211ENST00000589347 FBXO33Q7Z6M2 555 aa13.15□□□□□ -0.3
CLPTM1-211ENST00000589347 CLUAP1Q96AJ1 413 aa13.15□□□□□ -0.3
CLPTM1-211ENST00000589347 ZBED3Q96IU2 234 aaPredicted RBP13.15□□□□□ -0.3
CLPTM1-211ENST00000589347 VEZTQ9HBM0 779 aa13.15□□□□□ -0.3
CLPTM1-211ENST00000589347 SERPINA10Q9UK55 444 aa13.15□□□□□ -0.3
CLPTM1-211ENST00000589347 FGFR2P21802 821 aa13.14□□□□□ -0.31
CLPTM1-211ENST00000589347 MTX1Q13505 466 aa13.14□□□□□ -0.31
CLPTM1-211ENST00000589347 ARMC9Q7Z3E5 817 aa13.14□□□□□ -0.31
CLPTM1-211ENST00000589347 COPRSQ9NQ92 184 aa13.14□□□□□ -0.31
CLPTM1-211ENST00000589347 IQSEC3Q9UPP2 1182 aaPredicted RBP13.14□□□□□ -0.31
CLPTM1-211ENST00000589347 SUGT1Q9Y2Z0 365 aa13.14□□□□□ -0.31
CLPTM1-211ENST00000589347 CUL9Q8IWT3 2517 aa13.14□□□□□ -0.31
CLPTM1-211ENST00000589347 MS4A1P11836 297 aa13.13□□□□□ -0.31
CLPTM1-211ENST00000589347 ATG9AQ7Z3C6 839 aa13.13□□□□□ -0.31
CLPTM1-211ENST00000589347 ITPRIPQ8IWB1 547 aa13.13□□□□□ -0.31
CLPTM1-211ENST00000589347 DZIP1LQ8IYY4 767 aaKnown RBP13.13□□□□□ -0.31
CLPTM1-211ENST00000589347 TMEM57Q8N5G2 664 aa13.13□□□□□ -0.31
CLPTM1-211ENST00000589347 PA2G4Q9UQ80 394 aaKnown RBP13.13□□□□□ -0.31
CLPTM1-211ENST00000589347 AKAP2Q9Y2D5 859 aa13.13□□□□□ -0.31
CLPTM1-211ENST00000589347 CEP290O15078 2479 aa13.13□□□□□ -0.31
CLPTM1-211ENST00000589347 TRIOBPQ9H2D6 2365 aa13.13□□□□□ -0.31
CLPTM1-211ENST00000589347 CLRN2A0PK11 232 aa13.12□□□□□ -0.31
CLPTM1-211ENST00000589347 SEMA3EO15041 775 aa13.12□□□□□ -0.31
CLPTM1-211ENST00000589347 CRKP46108 304 aa13.12□□□□□ -0.31
CLPTM1-211ENST00000589347 TNNI2P48788 182 aa13.12□□□□□ -0.31
CLPTM1-211ENST00000589347 BCAMP50895 628 aa13.12□□□□□ -0.31
CLPTM1-211ENST00000589347 HDLBPQ00341 1268 aaKnown RBP13.12□□□□□ -0.31
CLPTM1-211ENST00000589347 WDR66Q8TBY9 1149 aa13.12□□□□□ -0.31
CLPTM1-211ENST00000589347 TEKT1Q969V4 418 aa13.12□□□□□ -0.31
CLPTM1-211ENST00000589347 CFHR5Q9BXR6 569 aa13.12□□□□□ -0.31
CLPTM1-211ENST00000589347 TMOD2Q9NZR1 351 aa13.12□□□□□ -0.31
CLPTM1-211ENST00000589347 COL6A3P12111 3177 aa13.12□□□□□ -0.31
CLPTM1-211ENST00000589347 KIAA0100Q14667 2235 aaKnown RBP13.11□□□□□ -0.31
CLPTM1-211ENST00000589347 GPR25O00155 361 aa13.11□□□□□ -0.31
CLPTM1-211ENST00000589347 PPP1R12BO60237 982 aaPredicted RBP13.11□□□□□ -0.31
CLPTM1-211ENST00000589347 SPDYE2Q495Y8 402 aa13.11□□□□□ -0.31
CLPTM1-211ENST00000589347 ZGPATQ8N5A5 531 aaKnown RBP13.11□□□□□ -0.31
CLPTM1-211ENST00000589347 DEFB129Q9H1M3 183 aa13.11□□□□□ -0.31
CLPTM1-211ENST00000589347 DENND2AQ9ULE3 1009 aa13.11□□□□□ -0.31
CLPTM1-211ENST00000589347 SCAF8Q9UPN6 1271 aaKnown RBP13.11□□□□□ -0.31
CLPTM1-211ENST00000589347 TBC1D8O95759 1140 aa13.1□□□□□ -0.31
CLPTM1-211ENST00000589347 G3BP1Q13283 466 aaKnown RBP eCLIP13.1□□□□□ -0.31
CLPTM1-211ENST00000589347 MVPQ14764 893 aaKnown RBP13.1□□□□□ -0.31
CLPTM1-211ENST00000589347 SUPT20HL1Q3ZLR7 823 aa13.1□□□□□ -0.31
CLPTM1-211ENST00000589347 PRAMEF18Q5VWM3 479 aa13.1□□□□□ -0.31
CLPTM1-211ENST00000589347 TNNQ9UQP3 1299 aa13.1□□□□□ -0.31
CLPTM1-211ENST00000589347 SSC5DA1L4H1 1573 aa13.1□□□□□ -0.31
CLPTM1-211ENST00000589347 POTEFA5A3E0 1075 aa13.09□□□□□ -0.31
CLPTM1-211ENST00000589347 IREB2P48200 963 aaKnown RBP13.09□□□□□ -0.31
CLPTM1-211ENST00000589347 TM4SF4P48230 202 aa13.09□□□□□ -0.31
CLPTM1-211ENST00000589347 OS9Q13438 667 aaPredicted RBP13.09□□□□□ -0.31
CLPTM1-211ENST00000589347 PRMT6Q96LA8 375 aaPredicted RBP13.09□□□□□ -0.31
CLPTM1-211ENST00000589347 ZNF70Q9UC06 446 aaPredicted RBP13.09□□□□□ -0.31
CLPTM1-211ENST00000589347 ANGEL1Q9UNK9 670 aaKnown RBP13.09□□□□□ -0.31
CLPTM1-211ENST00000589347 SALL1Q9NSC2 1324 aa13.09□□□□□ -0.31
CLPTM1-211ENST00000589347 MYO5AQ9Y4I1 1855 aaKnown RBP13.08□□□□□ -0.32
CLPTM1-211ENST00000589347 UBE2Q2LH0YL09 131 aa13.08□□□□□ -0.32
CLPTM1-211ENST00000589347 ZBTB22O15209 634 aa13.08□□□□□ -0.32
CLPTM1-211ENST00000589347 GORABQ5T7V8 394 aa13.08□□□□□ -0.32
CLPTM1-211ENST00000589347 ZDHHC15Q96MV8 337 aa13.08□□□□□ -0.32
CLPTM1-211ENST00000589347 MRIQ9BWK5 157 aa13.08□□□□□ -0.32
CLPTM1-211ENST00000589347 TDRD3Q9H7E2 651 aaKnown RBP13.08□□□□□ -0.32
CLPTM1-211ENST00000589347 PCDHAC2Q9Y5I4 1007 aa13.08□□□□□ -0.32
CLPTM1-211ENST00000589347 PDS5AQ29RF7 1337 aaKnown RBP13.08□□□□□ -0.32
CLPTM1-211ENST00000589347 CDK5RAP2Q96SN8 1893 aa13.08□□□□□ -0.32
CLPTM1-211ENST00000589347 RPAP1Q9BWH6 1393 aaPredicted RBP13.07□□□□□ -0.32
CLPTM1-211ENST00000589347 FOCADQ5VW36 1801 aa13.07□□□□□ -0.32
CLPTM1-211ENST00000589347 PNMA6EA0A0J9YXQ4 647 aa13.07□□□□□ -0.32
CLPTM1-211ENST00000589347 A0A1B0GUL7 405 aa13.07□□□□□ -0.32
CLPTM1-211ENST00000589347 UNCXA6NJT0 531 aa13.07□□□□□ -0.32
CLPTM1-211ENST00000589347 LDHBP07195 334 aaKnown RBP13.07□□□□□ -0.32
CLPTM1-211ENST00000589347 PHKA1P46020 1223 aa13.07□□□□□ -0.32
CLPTM1-211ENST00000589347 SREBF2Q12772 1141 aa13.07□□□□□ -0.32
CLPTM1-211ENST00000589347 TFCP2Q12800 502 aa13.07□□□□□ -0.32
CLPTM1-211ENST00000589347 PRKG1Q13976 671 aa13.07□□□□□ -0.32
CLPTM1-211ENST00000589347 RASA3Q14644 834 aa13.07□□□□□ -0.32
CLPTM1-211ENST00000589347 HHIPL2Q6UWX4 724 aa13.07□□□□□ -0.32
CLPTM1-211ENST00000589347 SLF2Q8IX21 1173 aa13.07□□□□□ -0.32
CLPTM1-211ENST00000589347 HOOK2Q96ED9 719 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms