RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 PATL2C9JE40 543 aaKnown RBP17.94■□□□□ 0.46
MBD1-217ENST00000588937 RPS6KA4O75676 772 aa17.94■□□□□ 0.46
MBD1-217ENST00000588937 CTDNEP1O95476 244 aa17.94■□□□□ 0.46
MBD1-217ENST00000588937 GNAT2P19087 354 aa17.94■□□□□ 0.46
MBD1-217ENST00000588937 GTF2E1P29083 439 aaPredicted RBP17.94■□□□□ 0.46
MBD1-217ENST00000588937 ATL3Q6DD88 541 aa17.94■□□□□ 0.46
MBD1-217ENST00000588937 MAGEB6Q8N7X4 407 aa17.94■□□□□ 0.46
MBD1-217ENST00000588937 GNL3LQ9NVN8 582 aaKnown RBP17.94■□□□□ 0.46
MBD1-217ENST00000588937 NARFQ9UHQ1 456 aa17.94■□□□□ 0.46
MBD1-217ENST00000588937 EP400Q96L91 3159 aa17.93■□□□□ 0.46
MBD1-217ENST00000588937 UBE4AQ14139 1066 aa17.93■□□□□ 0.46
MBD1-217ENST00000588937 BSDC1Q9NW68 430 aaPredicted RBP17.93■□□□□ 0.46
MBD1-217ENST00000588937 CCNL1Q9UK58 526 aaPredicted RBP17.93■□□□□ 0.46
MBD1-217ENST00000588937 BCAMP50895 628 aa17.92■□□□□ 0.46
MBD1-217ENST00000588937 UVSSAQ2YD98 709 aa17.92■□□□□ 0.46
MBD1-217ENST00000588937 C4BP0C0L5 1744 aa17.92■□□□□ 0.46
MBD1-217ENST00000588937 SLC27A3Q5K4L6 730 aa17.91■□□□□ 0.46
MBD1-217ENST00000588937 LEO1Q8WVC0 666 aaPredicted RBP17.91■□□□□ 0.46
MBD1-217ENST00000588937 CASZ1Q86V15 1759 aa17.91■□□□□ 0.46
MBD1-217ENST00000588937 MYH15Q9Y2K3 1946 aa17.91■□□□□ 0.46
MBD1-217ENST00000588937 A0A1B0GUL6 1792 aa17.91■□□□□ 0.46
MBD1-217ENST00000588937 KLF18A0A0U1RQI7 1052 aa17.91■□□□□ 0.46
MBD1-217ENST00000588937 ZPR1O75312 459 aa17.91■□□□□ 0.46
MBD1-217ENST00000588937 HS1BP3Q53T59 392 aa17.91■□□□□ 0.46
MBD1-217ENST00000588937 FAM173BQ6P4H8 233 aa17.91■□□□□ 0.46
MBD1-217ENST00000588937 RGS22Q8NE09 1264 aa17.91■□□□□ 0.46
MBD1-217ENST00000588937 SETDB2Q96T68 719 aa17.91■□□□□ 0.46
MBD1-217ENST00000588937 NACAP1Q9BZK3 213 aa17.91■□□□□ 0.46
MBD1-217ENST00000588937 NAPBQ9H115 298 aa17.91■□□□□ 0.46
MBD1-217ENST00000588937 NCOA5Q9HCD5 579 aaKnown RBP17.91■□□□□ 0.46
MBD1-217ENST00000588937 PNPLA7Q6ZV29 1317 aa17.9■□□□□ 0.46
MBD1-217ENST00000588937 GOLGA8BA8MQT2 603 aa17.9■□□□□ 0.46
MBD1-217ENST00000588937 SNAP23O00161 211 aa17.9■□□□□ 0.46
MBD1-217ENST00000588937 ANTXR2P58335 489 aa17.9■□□□□ 0.46
MBD1-217ENST00000588937 TBC1D9BQ66K14 1250 aa17.9■□□□□ 0.46
MBD1-217ENST00000588937 PDLIM2Q96JY6 352 aa17.9■□□□□ 0.46
MBD1-217ENST00000588937 TMEM87BQ96K49 555 aa17.9■□□□□ 0.46
MBD1-217ENST00000588937 ZNF396Q96N95 335 aaPredicted RBP17.9■□□□□ 0.46
MBD1-217ENST00000588937 RTCBQ9Y3I0 505 aaKnown RBP17.9■□□□□ 0.46
MBD1-217ENST00000588937 COL24A1Q17RW2 1714 aa17.9■□□□□ 0.46
MBD1-217ENST00000588937 CARMIL3Q8ND23 1372 aa17.9■□□□□ 0.46
MBD1-217ENST00000588937 ZNF804BA4D1E1 1349 aa17.9■□□□□ 0.46
MBD1-217ENST00000588937 MBD4O95243 580 aa17.89■□□□□ 0.45
MBD1-217ENST00000588937 TPRNQ4KMQ1 711 aa17.89■□□□□ 0.45
MBD1-217ENST00000588937 CAVIN4Q5BKX8 364 aa17.89■□□□□ 0.45
MBD1-217ENST00000588937 IFNL3Q8IZI9 196 aa17.89■□□□□ 0.45
MBD1-217ENST00000588937 NLRP3Q96P20 1036 aa17.89■□□□□ 0.45
MBD1-217ENST00000588937 CNNM2Q9H8M5 875 aa17.89■□□□□ 0.45
MBD1-217ENST00000588937 LRP2BPQ9P2M1 347 aa17.89■□□□□ 0.45
MBD1-217ENST00000588937 TFIP11Q9UBB9 837 aaKnown RBP17.89■□□□□ 0.45
MBD1-217ENST00000588937 ANGEL1Q9UNK9 670 aaKnown RBP17.89■□□□□ 0.45
MBD1-217ENST00000588937 ESPNB1AK53 854 aa17.89■□□□□ 0.45
MBD1-217ENST00000588937 CPLX1O14810 134 aa17.89■□□□□ 0.45
MBD1-217ENST00000588937 PLSCR1O15162 318 aa17.89■□□□□ 0.45
MBD1-217ENST00000588937 BICDL1Q6ZP65 573 aa17.89■□□□□ 0.45
MBD1-217ENST00000588937 TBC1D10CQ8IV04 446 aa17.89■□□□□ 0.45
MBD1-217ENST00000588937 RNF214Q8ND24 703 aa17.89■□□□□ 0.45
MBD1-217ENST00000588937 NBPF3Q9H094 633 aa17.89■□□□□ 0.45
MBD1-217ENST00000588937 BCL2L12Q9HB09 334 aa17.89■□□□□ 0.45
MBD1-217ENST00000588937 RRAGDQ9NQL2 400 aaPredicted RBP17.89■□□□□ 0.45
MBD1-217ENST00000588937 RGPD3A6NKT7 1758 aaPredicted RBP17.88■□□□□ 0.45
MBD1-217ENST00000588937 RGPD4Q7Z3J3 1758 aa17.88■□□□□ 0.45
MBD1-217ENST00000588937 GNPATO15228 680 aa17.88■□□□□ 0.45
MBD1-217ENST00000588937 DDX19AQ9NUU7 478 aaKnown RBP17.88■□□□□ 0.45
MBD1-217ENST00000588937 CDKL5O76039 1030 aa17.87■□□□□ 0.45
MBD1-217ENST00000588937 TRIM37O94972 964 aa17.87■□□□□ 0.45
MBD1-217ENST00000588937 KCNQ4P56696 695 aa17.87■□□□□ 0.45
MBD1-217ENST00000588937 TPTE2Q6XPS3 522 aa17.87■□□□□ 0.45
MBD1-217ENST00000588937 NBPF5PQ86XG9 351 aaPredicted RBP17.87■□□□□ 0.45
MBD1-217ENST00000588937 KRT23Q9C075 422 aa17.87■□□□□ 0.45
MBD1-217ENST00000588937 NUP62CLQ9H1M0 184 aa17.87■□□□□ 0.45
MBD1-217ENST00000588937 GPHNQ9NQX3 736 aaPredicted RBP17.87■□□□□ 0.45
MBD1-217ENST00000588937 DENND2AQ9ULE3 1009 aa17.87■□□□□ 0.45
MBD1-217ENST00000588937 MINPP1Q9UNW1 487 aa17.87■□□□□ 0.45
MBD1-217ENST00000588937 CHD4Q14839 1912 aa17.87■□□□□ 0.45
MBD1-217ENST00000588937 UBR3Q6ZT12 1888 aa17.87■□□□□ 0.45
MBD1-217ENST00000588937 TIAM2Q8IVF5 1701 aa17.87■□□□□ 0.45
MBD1-217ENST00000588937 SH2B2O14492 632 aaPredicted RBP17.86■□□□□ 0.45
MBD1-217ENST00000588937 CPLX2Q6PUV4 134 aaKnown RBP17.86■□□□□ 0.45
MBD1-217ENST00000588937 VPS37DQ86XT2 251 aa17.86■□□□□ 0.45
MBD1-217ENST00000588937 ARMT1Q9H993 441 aa17.86■□□□□ 0.45
MBD1-217ENST00000588937 LRRC4BQ9NT99 713 aa17.86■□□□□ 0.45
MBD1-217ENST00000588937 HPS5Q9UPZ3 1129 aa17.86■□□□□ 0.45
MBD1-217ENST00000588937 SEMA3EO15041 775 aa17.86■□□□□ 0.45
MBD1-217ENST00000588937 CCDC192P0DO97 292 aa17.86■□□□□ 0.45
MBD1-217ENST00000588937 CLCN1P35523 988 aa17.86■□□□□ 0.45
MBD1-217ENST00000588937 C3orf67Q6ZVT6 689 aa17.86■□□□□ 0.45
MBD1-217ENST00000588937 C8orf76Q96K31 380 aa17.86■□□□□ 0.45
MBD1-217ENST00000588937 ANKRD2Q9GZV1 360 aa17.86■□□□□ 0.45
MBD1-217ENST00000588937 GSG1L2A8MUP6 293 aa17.85■□□□□ 0.45
MBD1-217ENST00000588937 FDPSP14324 419 aaKnown RBP17.85■□□□□ 0.45
MBD1-217ENST00000588937 ADRA2BP18089 450 aa17.85■□□□□ 0.45
MBD1-217ENST00000588937 TDO2P48775 406 aa17.85■□□□□ 0.45
MBD1-217ENST00000588937 RPS8P62241 208 aaKnown RBP17.85■□□□□ 0.45
MBD1-217ENST00000588937 MAP3K11Q16584 847 aa17.85■□□□□ 0.45
MBD1-217ENST00000588937 GIMAP6Q6P9H5 292 aa17.85■□□□□ 0.45
MBD1-217ENST00000588937 BICD2Q8TD16 824 aa17.85■□□□□ 0.45
MBD1-217ENST00000588937 MTA3Q9BTC8 594 aa17.85■□□□□ 0.45
MBD1-217ENST00000588937 FUCA2Q9BTY2 467 aa17.85■□□□□ 0.45
MBD1-217ENST00000588937 EPB41L4AQ9HCS5 686 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms