RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 WNT10BO00744 389 aa24.59■■□□□ 1.53
ATG4D-208ENST00000588667 PRDX5P30044 214 aa24.59■■□□□ 1.53
ATG4D-208ENST00000588667 HDLBPQ00341 1268 aaKnown RBP24.59■■□□□ 1.53
ATG4D-208ENST00000588667 DLGAP5Q15398 846 aa24.59■■□□□ 1.53
ATG4D-208ENST00000588667 ZBED3Q96IU2 234 aaPredicted RBP24.59■■□□□ 1.53
ATG4D-208ENST00000588667 LDHBP07195 334 aaKnown RBP24.58■■□□□ 1.53
ATG4D-208ENST00000588667 CFAP100Q494V2 611 aa24.58■■□□□ 1.53
ATG4D-208ENST00000588667 CNTROBQ8N137 903 aa24.58■■□□□ 1.53
ATG4D-208ENST00000588667 NBPF9Q3BBW0 867 aa24.57■■□□□ 1.52
ATG4D-208ENST00000588667 MRIQ9BWK5 157 aa24.57■■□□□ 1.52
ATG4D-208ENST00000588667 GGA3Q9NZ52 723 aa24.57■■□□□ 1.52
ATG4D-208ENST00000588667 ABCF2Q9UG63 623 aa24.57■■□□□ 1.52
ATG4D-208ENST00000588667 MYH2Q9UKX2 1941 aa24.57■■□□□ 1.52
ATG4D-208ENST00000588667 SPDYE2BA6NHP3 402 aa24.57■■□□□ 1.52
ATG4D-208ENST00000588667 SPDYE6P0CI01 402 aa24.57■■□□□ 1.52
ATG4D-208ENST00000588667 SPTY2D1Q68D10 685 aaPredicted RBP24.57■■□□□ 1.52
ATG4D-208ENST00000588667 TEKT1Q969V4 418 aa24.57■■□□□ 1.52
ATG4D-208ENST00000588667 SNRKQ9NRH2 765 aa24.57■■□□□ 1.52
ATG4D-208ENST00000588667 ASTN2O75129 1339 aaPredicted RBP24.56■■□□□ 1.52
ATG4D-208ENST00000588667 MYO5AQ9Y4I1 1855 aaKnown RBP24.56■■□□□ 1.52
ATG4D-208ENST00000588667 CRKP46108 304 aa24.56■■□□□ 1.52
ATG4D-208ENST00000588667 RBM5P52756 815 aaKnown RBP eCLIP24.56■■□□□ 1.52
ATG4D-208ENST00000588667 DCPSQ96C86 337 aaKnown RBP24.56■■□□□ 1.52
ATG4D-208ENST00000588667 PITPNM2Q9BZ72 1349 aa24.55■■□□□ 1.52
ATG4D-208ENST00000588667 ITGBL1O95965 494 aaPredicted RBP24.55■■□□□ 1.52
ATG4D-208ENST00000588667 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.55■■□□□ 1.52
ATG4D-208ENST00000588667 ZBTB47Q9UFB7 747 aaPredicted RBP24.55■■□□□ 1.52
ATG4D-208ENST00000588667 MAST2Q6P0Q8 1798 aa24.55■■□□□ 1.52
ATG4D-208ENST00000588667 ANGEL2Q5VTE6 544 aaKnown RBP24.54■■□□□ 1.52
ATG4D-208ENST00000588667 PCDHAC2Q9Y5I4 1007 aa24.54■■□□□ 1.52
ATG4D-208ENST00000588667 TRPM7Q96QT4 1865 aa24.54■■□□□ 1.52
ATG4D-208ENST00000588667 DOCK2Q92608 1830 aa24.54■■□□□ 1.52
ATG4D-208ENST00000588667 ZAP70P43403 619 aa24.53■■□□□ 1.52
ATG4D-208ENST00000588667 ANKRD45Q5TZF3 282 aa24.53■■□□□ 1.52
ATG4D-208ENST00000588667 HHIPL2Q6UWX4 724 aa24.53■■□□□ 1.52
ATG4D-208ENST00000588667 ERICH6Q7L0X2 663 aa24.53■■□□□ 1.52
ATG4D-208ENST00000588667 CDC37L1Q7L3B6 337 aa24.53■■□□□ 1.52
ATG4D-208ENST00000588667 DZIP1Q86YF9 867 aaKnown RBP24.53■■□□□ 1.52
ATG4D-208ENST00000588667 PRMT6Q96LA8 375 aaPredicted RBP24.53■■□□□ 1.52
ATG4D-208ENST00000588667 PASKQ96RG2 1323 aa24.53■■□□□ 1.52
ATG4D-208ENST00000588667 MYO1BO43795 1136 aa24.53■■□□□ 1.52
ATG4D-208ENST00000588667 CYP2E1P05181 493 aaPredicted RBP24.53■■□□□ 1.52
ATG4D-208ENST00000588667 TBC1D9Q6ZT07 1266 aa24.53■■□□□ 1.52
ATG4D-208ENST00000588667 ZDHHC15Q96MV8 337 aa24.53■■□□□ 1.52
ATG4D-208ENST00000588667 ATP5JP18859 108 aa24.52■■□□□ 1.52
ATG4D-208ENST00000588667 KRT26Q7Z3Y9 468 aa24.52■■□□□ 1.52
ATG4D-208ENST00000588667 SULF1Q8IWU6 871 aa24.52■■□□□ 1.52
ATG4D-208ENST00000588667 GPATCH3Q96I76 525 aa24.52■■□□□ 1.52
ATG4D-208ENST00000588667 GLIS2Q9BZE0 524 aaPredicted RBP24.52■■□□□ 1.52
ATG4D-208ENST00000588667 NUCB1Q02818 461 aa24.51■■□□□ 1.51
ATG4D-208ENST00000588667 DIXDC1Q155Q3 683 aa24.51■■□□□ 1.51
ATG4D-208ENST00000588667 SKAP1Q86WV1 359 aa24.51■■□□□ 1.51
ATG4D-208ENST00000588667 LRP2BPQ9P2M1 347 aa24.51■■□□□ 1.51
ATG4D-208ENST00000588667 IGSF3O75054 1194 aa24.5■■□□□ 1.51
ATG4D-208ENST00000588667 RGS3P49796 1198 aa24.5■■□□□ 1.51
ATG4D-208ENST00000588667 APOBEC3FQ8IUX4 373 aaKnown RBP24.5■■□□□ 1.51
ATG4D-208ENST00000588667 SLF2Q8IX21 1173 aa24.5■■□□□ 1.51
ATG4D-208ENST00000588667 ECHDC1Q9NTX5 307 aa24.5■■□□□ 1.51
ATG4D-208ENST00000588667 MECOMQ03112 1051 aa24.5■■□□□ 1.51
ATG4D-208ENST00000588667 RAI14Q9P0K7 980 aa24.5■■□□□ 1.51
ATG4D-208ENST00000588667 DAGLAQ9Y4D2 1042 aa24.5■■□□□ 1.51
ATG4D-208ENST00000588667 NDUFB9Q9Y6M9 179 aa24.5■■□□□ 1.51
ATG4D-208ENST00000588667 USP48Q86UV5 1035 aa24.49■■□□□ 1.51
ATG4D-208ENST00000588667 NSUN4Q96CB9 384 aaKnown RBP24.49■■□□□ 1.51
ATG4D-208ENST00000588667 GAKO14976 1311 aa24.48■■□□□ 1.51
ATG4D-208ENST00000588667 AOX1Q06278 1338 aa24.48■■□□□ 1.51
ATG4D-208ENST00000588667 ADM5C9JUS6 153 aa24.48■■□□□ 1.51
ATG4D-208ENST00000588667 TRAF5O00463 557 aa24.48■■□□□ 1.51
ATG4D-208ENST00000588667 HSPA6P17066 643 aa24.48■■□□□ 1.51
ATG4D-208ENST00000588667 SPDYE2Q495Y8 402 aa24.48■■□□□ 1.51
ATG4D-208ENST00000588667 APOBEC3HQ6NTF7 200 aaKnown RBP24.48■■□□□ 1.51
ATG4D-208ENST00000588667 BOLA2Q9H3K6 86 aa24.48■■□□□ 1.51
ATG4D-208ENST00000588667 PIH1D3Q9NQM4 214 aaKnown RBP24.48■■□□□ 1.51
ATG4D-208ENST00000588667 CLRN2A0PK11 232 aa24.47■■□□□ 1.51
ATG4D-208ENST00000588667 GSTO1P78417 241 aa24.47■■□□□ 1.51
ATG4D-208ENST00000588667 TTF1Q15361 905 aaPredicted RBP24.47■■□□□ 1.51
ATG4D-208ENST00000588667 CHD1LQ86WJ1 897 aa24.47■■□□□ 1.51
ATG4D-208ENST00000588667 ZNF384Q8TF68 577 aa24.47■■□□□ 1.51
ATG4D-208ENST00000588667 FAM163AQ96GL9 167 aaPredicted RBP24.47■■□□□ 1.51
ATG4D-208ENST00000588667 DNAJC2Q99543 621 aaKnown RBP24.47■■□□□ 1.51
ATG4D-208ENST00000588667 HAUS7Q99871 368 aa24.47■■□□□ 1.51
ATG4D-208ENST00000588667 TDRD3Q9H7E2 651 aaKnown RBP24.47■■□□□ 1.51
ATG4D-208ENST00000588667 TTC41PQ6P2S7 1318 aa24.47■■□□□ 1.51
ATG4D-208ENST00000588667 APLP1P51693 650 aa24.46■■□□□ 1.51
ATG4D-208ENST00000588667 ANTXR1Q9H6X2 564 aa24.46■■□□□ 1.51
ATG4D-208ENST00000588667 ZNF70Q9UC06 446 aaPredicted RBP24.46■■□□□ 1.51
ATG4D-208ENST00000588667 MROH7-TTC4A0A0A0MT08 1334 aa24.46■■□□□ 1.51
ATG4D-208ENST00000588667 OTUD7AQ8TE49 926 aaPredicted RBP24.46■■□□□ 1.51
ATG4D-208ENST00000588667 LNPKQ9C0E8 428 aa24.46■■□□□ 1.51
ATG4D-208ENST00000588667 VEZTQ9HBM0 779 aa24.46■■□□□ 1.51
ATG4D-208ENST00000588667 SALL3Q9BXA9 1300 aa24.45■■□□□ 1.51
ATG4D-208ENST00000588667 MYH7P12883 1935 aa24.45■■□□□ 1.5
ATG4D-208ENST00000588667 IDH1O75874 414 aaKnown RBP24.45■■□□□ 1.5
ATG4D-208ENST00000588667 LDHCP07864 332 aa24.45■■□□□ 1.5
ATG4D-208ENST00000588667 MX1P20591 662 aa24.45■■□□□ 1.5
ATG4D-208ENST00000588667 GOLIM4O00461 696 aa24.44■■□□□ 1.5
ATG4D-208ENST00000588667 FMR1Q06787 632 aaKnown RBP eCLIP24.44■■□□□ 1.5
ATG4D-208ENST00000588667 TNFAIP1Q13829 316 aa24.44■■□□□ 1.5
ATG4D-208ENST00000588667 TSHZ3Q63HK5 1081 aa24.44■■□□□ 1.5
ATG4D-208ENST00000588667 PAG1Q9NWQ8 432 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms