RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 C4orf48Q5BLP8 95 aa7.45□□□□□ -1.22
CHUK-203ENST00000588656 PASKQ96RG2 1323 aa7.45□□□□□ -1.22
CHUK-203ENST00000588656 LTBP3Q9NS15 1303 aa7.45□□□□□ -1.22
CHUK-203ENST00000588656 CEMIPQ8WUJ3 1361 aa7.45□□□□□ -1.22
CHUK-203ENST00000588656 SPEF2Q9C093 1822 aa7.44□□□□□ -1.22
CHUK-203ENST00000588656 TMEM88BA6NKF7 163 aa7.44□□□□□ -1.22
CHUK-203ENST00000588656 TRAF5O00463 557 aa7.44□□□□□ -1.22
CHUK-203ENST00000588656 U2AF1L5P0DN76 240 aaPredicted RBP7.44□□□□□ -1.22
CHUK-203ENST00000588656 MYL6BP14649 208 aa7.44□□□□□ -1.22
CHUK-203ENST00000588656 EPHX2P34913 555 aa7.44□□□□□ -1.22
CHUK-203ENST00000588656 U2AF1Q01081 240 aaKnown RBP eCLIP7.44□□□□□ -1.22
CHUK-203ENST00000588656 FKBP4Q02790 459 aaKnown RBP eCLIP7.44□□□□□ -1.22
CHUK-203ENST00000588656 LDHDQ86WU2 507 aa7.44□□□□□ -1.22
CHUK-203ENST00000588656 SYNE4Q8N205 404 aa7.44□□□□□ -1.22
CHUK-203ENST00000588656 C7orf43Q8WVR3 580 aa7.44□□□□□ -1.22
CHUK-203ENST00000588656 AIDAQ96BJ3 306 aa7.44□□□□□ -1.22
CHUK-203ENST00000588656 ITPKCQ96DU7 683 aa7.44□□□□□ -1.22
CHUK-203ENST00000588656 THUMPD2Q9BTF0 503 aaKnown RBP7.44□□□□□ -1.22
CHUK-203ENST00000588656 ZFAND3Q9H8U3 227 aa7.44□□□□□ -1.22
CHUK-203ENST00000588656 ABT1Q9ULW3 272 aaKnown RBP7.44□□□□□ -1.22
CHUK-203ENST00000588656 IQCA1LA6NCM1 817 aa7.43□□□□□ -1.22
CHUK-203ENST00000588656 NPR1P16066 1061 aa7.43□□□□□ -1.22
CHUK-203ENST00000588656 GTF2E1P29083 439 aaPredicted RBP7.43□□□□□ -1.22
CHUK-203ENST00000588656 IARSP41252 1262 aaKnown RBP7.43□□□□□ -1.22
CHUK-203ENST00000588656 TTLL7Q6ZT98 887 aa7.43□□□□□ -1.22
CHUK-203ENST00000588656 SH3RF1Q7Z6J0 888 aa7.43□□□□□ -1.22
CHUK-203ENST00000588656 CNTROBQ8N137 903 aa7.43□□□□□ -1.22
CHUK-203ENST00000588656 GPKOWQ92917 476 aaPredicted RBP eCLIP7.43□□□□□ -1.22
CHUK-203ENST00000588656 C1QTNF2Q9BXJ5 285 aa7.43□□□□□ -1.22
CHUK-203ENST00000588656 TEX13AQ9BXU3 409 aaPredicted RBP7.43□□□□□ -1.22
CHUK-203ENST00000588656 HACL1Q9UJ83 578 aa7.43□□□□□ -1.22
CHUK-203ENST00000588656 MAP4K5Q9Y4K4 846 aa7.43□□□□□ -1.22
CHUK-203ENST00000588656 CLSPNQ9HAW4 1339 aa7.43□□□□□ -1.22
CHUK-203ENST00000588656 THSD7BQ9C0I4 1608 aa7.42□□□□□ -1.22
CHUK-203ENST00000588656 COL4A1P02462 1669 aa7.42□□□□□ -1.22
CHUK-203ENST00000588656 DDX60Q8IY21 1712 aaKnown RBP7.42□□□□□ -1.22
CHUK-203ENST00000588656 MAN1A2O60476 641 aa7.42□□□□□ -1.22
CHUK-203ENST00000588656 AOC2O75106 756 aa7.42□□□□□ -1.22
CHUK-203ENST00000588656 NR3C2P08235 984 aa7.42□□□□□ -1.22
CHUK-203ENST00000588656 SNRPA1P09661 255 aaKnown RBP7.42□□□□□ -1.22
CHUK-203ENST00000588656 HSPA8P11142 646 aaKnown RBP7.42□□□□□ -1.22
CHUK-203ENST00000588656 EPS15P42566 896 aa7.42□□□□□ -1.22
CHUK-203ENST00000588656 CLK2P49760 499 aaKnown RBP7.42□□□□□ -1.22
CHUK-203ENST00000588656 RTL5Q5HYW3 569 aaPredicted RBP7.42□□□□□ -1.22
CHUK-203ENST00000588656 CYP4F22Q6NT55 531 aa7.42□□□□□ -1.22
CHUK-203ENST00000588656 VASH1Q7L8A9 365 aaPredicted RBP7.42□□□□□ -1.22
CHUK-203ENST00000588656 TRMT44Q8IYL2 757 aaKnown RBP7.42□□□□□ -1.22
CHUK-203ENST00000588656 RTF1Q92541 710 aaKnown RBP7.42□□□□□ -1.22
CHUK-203ENST00000588656 SLC24A3Q9HC58 644 aa7.42□□□□□ -1.22
CHUK-203ENST00000588656 RRP7AQ9Y3A4 280 aaKnown RBP7.42□□□□□ -1.22
CHUK-203ENST00000588656 ERBB4Q15303 1308 aa7.42□□□□□ -1.22
CHUK-203ENST00000588656 UBN2Q6ZU65 1347 aa7.42□□□□□ -1.22
CHUK-203ENST00000588656 SNED1Q8TER0 1413 aa7.42□□□□□ -1.22
CHUK-203ENST00000588656 AKAP11Q9UKA4 1901 aa7.41□□□□□ -1.22
CHUK-203ENST00000588656 ANXA1P04083 346 aa7.41□□□□□ -1.22
CHUK-203ENST00000588656 BMP2P12643 396 aa7.41□□□□□ -1.22
CHUK-203ENST00000588656 CTCFP49711 727 aaPredicted RBP7.41□□□□□ -1.22
CHUK-203ENST00000588656 DEFB115Q30KQ5 88 aa7.41□□□□□ -1.22
CHUK-203ENST00000588656 C6orf118Q5T5N4 469 aa7.41□□□□□ -1.22
CHUK-203ENST00000588656 SOGA3Q5TF21 947 aa7.41□□□□□ -1.22
CHUK-203ENST00000588656 DLK2Q6UY11 383 aa7.41□□□□□ -1.22
CHUK-203ENST00000588656 TPTE2Q6XPS3 522 aa7.41□□□□□ -1.22
CHUK-203ENST00000588656 SH3BP5LQ7L8J4 393 aa7.41□□□□□ -1.22
CHUK-203ENST00000588656 ZNF408Q9H9D4 720 aa7.41□□□□□ -1.22
CHUK-203ENST00000588656 ZNF652Q9Y2D9 606 aa7.41□□□□□ -1.22
CHUK-203ENST00000588656 WDR33Q9C0J8 1336 aaKnown RBP7.41□□□□□ -1.22
CHUK-203ENST00000588656 SHTN1A0MZ66 631 aa7.4□□□□□ -1.22
CHUK-203ENST00000588656 CCDC85CA6NKD9 419 aa7.4□□□□□ -1.22
CHUK-203ENST00000588656 SOBPA7XYQ1 873 aa7.4□□□□□ -1.22
CHUK-203ENST00000588656 PPP2R1AP30153 589 aa7.4□□□□□ -1.22
CHUK-203ENST00000588656 AOC3Q16853 763 aa7.4□□□□□ -1.22
CHUK-203ENST00000588656 SUSD4Q5VX71 490 aa7.4□□□□□ -1.22
CHUK-203ENST00000588656 LARGE2Q8N3Y3 721 aa7.4□□□□□ -1.22
CHUK-203ENST00000588656 RPGRQ92834 1020 aaKnown RBP7.4□□□□□ -1.22
CHUK-203ENST00000588656 ABHD8Q96I13 439 aa7.4□□□□□ -1.22
CHUK-203ENST00000588656 CFAP53Q96M91 514 aa7.4□□□□□ -1.22
CHUK-203ENST00000588656 POLR3EQ9NVU0 708 aa7.4□□□□□ -1.22
CHUK-203ENST00000588656 SCN9AQ15858 1988 aa7.4□□□□□ -1.23
CHUK-203ENST00000588656 TNRC18O15417 2968 aaPredicted RBP7.39□□□□□ -1.23
CHUK-203ENST00000588656 FZD9O00144 591 aa7.39□□□□□ -1.23
CHUK-203ENST00000588656 VSIG8P0DPA2 414 aa7.39□□□□□ -1.23
CHUK-203ENST00000588656 LORP23490 312 aaPredicted RBP7.39□□□□□ -1.23
CHUK-203ENST00000588656 LMOD1P29536 600 aaPredicted RBP7.39□□□□□ -1.23
CHUK-203ENST00000588656 SCNN1DP51172 638 aa7.39□□□□□ -1.23
CHUK-203ENST00000588656 EIF6P56537 245 aaKnown RBP7.39□□□□□ -1.23
CHUK-203ENST00000588656 RTKN2Q8IZC4 609 aa7.39□□□□□ -1.23
CHUK-203ENST00000588656 LINC00528Q8N1L1 170 aa7.39□□□□□ -1.23
CHUK-203ENST00000588656 MEIOBQ8N635 442 aa7.39□□□□□ -1.23
CHUK-203ENST00000588656 JDP2Q8WYK2 163 aa7.39□□□□□ -1.23
CHUK-203ENST00000588656 TSEN34Q9BSV6 310 aaKnown RBP7.39□□□□□ -1.23
CHUK-203ENST00000588656 PRDM10Q9NQV6 1147 aa7.39□□□□□ -1.23
CHUK-203ENST00000588656 DDX21Q9NR30 783 aaKnown RBP eCLIP7.39□□□□□ -1.23
CHUK-203ENST00000588656 MAP3K15Q6ZN16 1313 aa7.38□□□□□ -1.23
CHUK-203ENST00000588656 MAGEB6P1A0A0J9YX57 407 aa7.38□□□□□ -1.23
CHUK-203ENST00000588656 RASSF10A6NK89 507 aa7.38□□□□□ -1.23
CHUK-203ENST00000588656 PPIP5K2O43314 1243 aa7.38□□□□□ -1.23
CHUK-203ENST00000588656 EIF2S2P20042 333 aaKnown RBP7.38□□□□□ -1.23
CHUK-203ENST00000588656 FSHRP23945 695 aa7.38□□□□□ -1.23
CHUK-203ENST00000588656 ALDH1B1P30837 517 aa7.38□□□□□ -1.23
CHUK-203ENST00000588656 PROSER3Q2NL68 480 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms