RNA–Protein interactions for RNA: ENST00000588459.1

RPRD1A-206, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-206ENST00000588459 C1orf115Q9H7X2 142 aa17.05■□□□□ 0.32
RPRD1A-206ENST00000588459 FZD1Q9UP38 647 aa17.05■□□□□ 0.32
RPRD1A-206ENST00000588459 SSC5DA1L4H1 1573 aa17.04■□□□□ 0.32
RPRD1A-206ENST00000588459 PHKA1P46020 1223 aa17.04■□□□□ 0.32
RPRD1A-206ENST00000588459 TFCP2Q12800 502 aa17.04■□□□□ 0.32
RPRD1A-206ENST00000588459 RASAL3Q86YV0 1011 aa17.04■□□□□ 0.32
RPRD1A-206ENST00000588459 CCDC102AQ96A19 550 aa17.04■□□□□ 0.32
RPRD1A-206ENST00000588459 TDRD3Q9H7E2 651 aaKnown RBP17.04■□□□□ 0.32
RPRD1A-206ENST00000588459 KIF23Q02241 960 aaPredicted RBP17.03■□□□□ 0.32
RPRD1A-206ENST00000588459 SPDYE2Q495Y8 402 aa17.03■□□□□ 0.32
RPRD1A-206ENST00000588459 PRDM10Q9NQV6 1147 aa17.03■□□□□ 0.32
RPRD1A-206ENST00000588459 ZNF70Q9UC06 446 aaPredicted RBP17.03■□□□□ 0.32
RPRD1A-206ENST00000588459 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.03■□□□□ 0.32
RPRD1A-206ENST00000588459 TIMM10P62072 90 aa17.02■□□□□ 0.32
RPRD1A-206ENST00000588459 PANK1Q8TE04 598 aa17.02■□□□□ 0.32
RPRD1A-206ENST00000588459 TEKT1Q969V4 418 aa17.02■□□□□ 0.32
RPRD1A-206ENST00000588459 A0A1B0GUL7 405 aa17.01■□□□□ 0.31
RPRD1A-206ENST00000588459 RASA3Q14644 834 aa17.01■□□□□ 0.31
RPRD1A-206ENST00000588459 CCDC102BQ68D86 513 aa17.01■□□□□ 0.31
RPRD1A-206ENST00000588459 ARMC9Q7Z3E5 817 aa17.01■□□□□ 0.31
RPRD1A-206ENST00000588459 WDR66Q8TBY9 1149 aa17.01■□□□□ 0.31
RPRD1A-206ENST00000588459 GNL3LQ9NVN8 582 aaKnown RBP17.01■□□□□ 0.31
RPRD1A-206ENST00000588459 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.01■□□□□ 0.31
RPRD1A-206ENST00000588459 ANGEL1Q9UNK9 670 aaKnown RBP17.01■□□□□ 0.31
RPRD1A-206ENST00000588459 PPP2R3BQ9Y5P8 575 aa17.01■□□□□ 0.31
RPRD1A-206ENST00000588459 MAST3O60307 1309 aa17■□□□□ 0.31
RPRD1A-206ENST00000588459 TCP10L2B9ZVM9 353 aa17■□□□□ 0.31
RPRD1A-206ENST00000588459 CACNB3P54284 484 aa17■□□□□ 0.31
RPRD1A-206ENST00000588459 G3BP1Q13283 466 aaKnown RBP eCLIP17■□□□□ 0.31
RPRD1A-206ENST00000588459 NBPF12Q5TAG4 269 aaPredicted RBP17■□□□□ 0.31
RPRD1A-206ENST00000588459 AKAP11Q9UKA4 1901 aa17■□□□□ 0.31
RPRD1A-206ENST00000588459 ZBTB7BO15156 539 aaPredicted RBP16.99■□□□□ 0.31
RPRD1A-206ENST00000588459 PRDX5P30044 214 aa16.99■□□□□ 0.31
RPRD1A-206ENST00000588459 HDLBPQ00341 1268 aaKnown RBP16.99■□□□□ 0.31
RPRD1A-206ENST00000588459 MKRN3Q13064 507 aaKnown RBP16.99■□□□□ 0.31
RPRD1A-206ENST00000588459 TNFAIP1Q13829 316 aa16.99■□□□□ 0.31
RPRD1A-206ENST00000588459 CDAN1Q8IWY9 1227 aa16.99■□□□□ 0.31
RPRD1A-206ENST00000588459 XAGE2Q96GT9 111 aa16.99■□□□□ 0.31
RPRD1A-206ENST00000588459 NEUROD6Q96NK8 337 aa16.99■□□□□ 0.31
RPRD1A-206ENST00000588459 DENND2AQ9ULE3 1009 aa16.99■□□□□ 0.31
RPRD1A-206ENST00000588459 AKAP2Q9Y2D5 859 aa16.99■□□□□ 0.31
RPRD1A-206ENST00000588459 SUGT1Q9Y2Z0 365 aa16.99■□□□□ 0.31
RPRD1A-206ENST00000588459 CA12O43570 354 aa16.98■□□□□ 0.31
RPRD1A-206ENST00000588459 ATP8B2P98198 1209 aa16.98■□□□□ 0.31
RPRD1A-206ENST00000588459 POLA2Q14181 598 aa16.98■□□□□ 0.31
RPRD1A-206ENST00000588459 DIXDC1Q155Q3 683 aa16.98■□□□□ 0.31
RPRD1A-206ENST00000588459 ZDHHC15Q96MV8 337 aa16.98■□□□□ 0.31
RPRD1A-206ENST00000588459 CSRNP1Q96S65 589 aa16.98■□□□□ 0.31
RPRD1A-206ENST00000588459 TMEM39BQ9GZU3 492 aa16.98■□□□□ 0.31
RPRD1A-206ENST00000588459 OTOFQ9HC10 1997 aa16.98■□□□□ 0.31
RPRD1A-206ENST00000588459 SEMA3EO15041 775 aa16.97■□□□□ 0.31
RPRD1A-206ENST00000588459 CAPN15O75808 1086 aa16.97■□□□□ 0.31
RPRD1A-206ENST00000588459 RASGRF1Q13972 1273 aa16.97■□□□□ 0.31
RPRD1A-206ENST00000588459 SUPT20HL1Q3ZLR7 823 aa16.97■□□□□ 0.31
RPRD1A-206ENST00000588459 APOBEC3HQ6NTF7 200 aaKnown RBP16.97■□□□□ 0.31
RPRD1A-206ENST00000588459 SSH3Q8TE77 659 aa16.97■□□□□ 0.31
RPRD1A-206ENST00000588459 CASP8AP2Q9UKL3 1982 aa16.97■□□□□ 0.31
RPRD1A-206ENST00000588459 PPP1R12BO60237 982 aaPredicted RBP16.96■□□□□ 0.31
RPRD1A-206ENST00000588459 LDHBP07195 334 aaKnown RBP16.96■□□□□ 0.31
RPRD1A-206ENST00000588459 TNNI2P48788 182 aa16.96■□□□□ 0.31
RPRD1A-206ENST00000588459 OS9Q13438 667 aaPredicted RBP16.96■□□□□ 0.31
RPRD1A-206ENST00000588459 MVPQ14764 893 aaKnown RBP16.96■□□□□ 0.31
RPRD1A-206ENST00000588459 LDLRAD1Q5T700 205 aa16.96■□□□□ 0.31
RPRD1A-206ENST00000588459 HHIPL2Q6UWX4 724 aa16.96■□□□□ 0.31
RPRD1A-206ENST00000588459 CLMNQ96JQ2 1002 aa16.96■□□□□ 0.31
RPRD1A-206ENST00000588459 TEPSINQ96N21 525 aa16.96■□□□□ 0.31
RPRD1A-206ENST00000588459 MRIQ9BWK5 157 aa16.96■□□□□ 0.31
RPRD1A-206ENST00000588459 DAGLAQ9Y4D2 1042 aa16.96■□□□□ 0.31
RPRD1A-206ENST00000588459 SALL1Q9NSC2 1324 aa16.96■□□□□ 0.3
RPRD1A-206ENST00000588459 SURF6O75683 361 aaKnown RBP16.95■□□□□ 0.3
RPRD1A-206ENST00000588459 TRPA1O75762 1119 aa16.95■□□□□ 0.3
RPRD1A-206ENST00000588459 MAP3K11Q16584 847 aa16.95■□□□□ 0.3
RPRD1A-206ENST00000588459 GORABQ5T7V8 394 aa16.95■□□□□ 0.3
RPRD1A-206ENST00000588459 RNF186Q9NXI6 227 aa16.95■□□□□ 0.3
RPRD1A-206ENST00000588459 TMOD2Q9NZR1 351 aa16.95■□□□□ 0.3
RPRD1A-206ENST00000588459 RCAN3Q9UKA8 241 aa16.95■□□□□ 0.3
RPRD1A-206ENST00000588459 MYH2Q9UKX2 1941 aa16.95■□□□□ 0.3
RPRD1A-206ENST00000588459 USP2O75604 605 aaPredicted RBP16.94■□□□□ 0.3
RPRD1A-206ENST00000588459 IREB2P48200 963 aaKnown RBP16.94■□□□□ 0.3
RPRD1A-206ENST00000588459 CEP85Q6P2H3 762 aa16.94■□□□□ 0.3
RPRD1A-206ENST00000588459 PI16Q6UXB8 463 aa16.94■□□□□ 0.3
RPRD1A-206ENST00000588459 ABCF2Q9UG63 623 aa16.94■□□□□ 0.3
RPRD1A-206ENST00000588459 MS4A1P11836 297 aa16.93■□□□□ 0.3
RPRD1A-206ENST00000588459 ZGPATQ8N5A5 531 aaKnown RBP16.93■□□□□ 0.3
RPRD1A-206ENST00000588459 SLC10A4Q96EP9 437 aa16.93■□□□□ 0.3
RPRD1A-206ENST00000588459 SAGE1Q9NXZ1 904 aa16.93■□□□□ 0.3
RPRD1A-206ENST00000588459 COG6Q9Y2V7 657 aa16.93■□□□□ 0.3
RPRD1A-206ENST00000588459 PDS5AQ29RF7 1337 aaKnown RBP16.93■□□□□ 0.3
RPRD1A-206ENST00000588459 TNNI3KQ59H18 835 aa16.92■□□□□ 0.3
RPRD1A-206ENST00000588459 SPRYD7Q5W111 196 aa16.92■□□□□ 0.3
RPRD1A-206ENST00000588459 CDC42EP5Q6NZY7 148 aa16.92■□□□□ 0.3
RPRD1A-206ENST00000588459 DZIP1Q86YF9 867 aaKnown RBP16.92■□□□□ 0.3
RPRD1A-206ENST00000588459 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
RPRD1A-206ENST00000588459 HMG20BQ9P0W2 317 aa16.92■□□□□ 0.3
RPRD1A-206ENST00000588459 FPGT-TNNI3KV9GXZ4 949 aa16.92■□□□□ 0.3
RPRD1A-206ENST00000588459 ZBTB22O15209 634 aa16.91■□□□□ 0.3
RPRD1A-206ENST00000588459 ARID4AP29374 1257 aaPredicted RBP16.91■□□□□ 0.3
RPRD1A-206ENST00000588459 WNK4Q96J92 1243 aa16.91■□□□□ 0.3
RPRD1A-206ENST00000588459 DBNDD2Q9BQY9 259 aa16.91■□□□□ 0.3
RPRD1A-206ENST00000588459 ELP3Q9H9T3 547 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms