RNA–Protein interactions for RNA: ENST00000588170.5

GRN-212, Transcript of granulin precursor, human

TSL 2

Gene GRN, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRN-212	ENST00000588170	CLASRP	Q8N2M8	674 aa	Known RBP	18.53	■□□□□ 0.56
GRN-212	ENST00000588170	MTMR14	Q8NCE2	650 aa		18.53	■□□□□ 0.56
GRN-212	ENST00000588170	DCPS	Q96C86	337 aa	Known RBP	18.53	■□□□□ 0.56
GRN-212	ENST00000588170	LRRCC1	Q9C099	1032 aa		18.53	■□□□□ 0.56
GRN-212	ENST00000588170	SPDYE2B	A6NHP3	402 aa		18.52	■□□□□ 0.56
GRN-212	ENST00000588170	ADM5	C9JUS6	153 aa		18.52	■□□□□ 0.56
GRN-212	ENST00000588170	SPDYE6	P0CI01	402 aa		18.52	■□□□□ 0.56
GRN-212	ENST00000588170	CRK	P46108	304 aa		18.52	■□□□□ 0.56
GRN-212	ENST00000588170	APLP1	P51693	650 aa		18.52	■□□□□ 0.56
GRN-212	ENST00000588170	CDC37L1	Q7L3B6	337 aa		18.52	■□□□□ 0.56
GRN-212	ENST00000588170	SERPINA10	Q9UK55	444 aa		18.52	■□□□□ 0.56
GRN-212	ENST00000588170	AKAP11	Q9UKA4	1901 aa		18.52	■□□□□ 0.56
GRN-212	ENST00000588170	SALL1	Q9NSC2	1324 aa		18.51	■□□□□ 0.55
GRN-212	ENST00000588170	LDHB	P07195	334 aa	Known RBP	18.51	■□□□□ 0.55
GRN-212	ENST00000588170	AAMP	Q13685	434 aa		18.51	■□□□□ 0.55
GRN-212	ENST00000588170	KRT26	Q7Z3Y9	468 aa		18.51	■□□□□ 0.55
GRN-212	ENST00000588170	ZNF512B	Q96KM6	892 aa	Predicted RBP	18.51	■□□□□ 0.55
GRN-212	ENST00000588170	ABCF2	Q9UG63	623 aa		18.51	■□□□□ 0.55
GRN-212	ENST00000588170	SUGT1	Q9Y2Z0	365 aa		18.51	■□□□□ 0.55
GRN-212	ENST00000588170	NDUFB9	Q9Y6M9	179 aa		18.51	■□□□□ 0.55
GRN-212	ENST00000588170	PDS5A	Q29RF7	1337 aa	Known RBP	18.5	■□□□□ 0.55
GRN-212	ENST00000588170	IGHD	P01880	384 aa		18.5	■□□□□ 0.55
GRN-212	ENST00000588170	IFIT2	P09913	472 aa	Known RBP	18.5	■□□□□ 0.55
GRN-212	ENST00000588170	HDAC1	Q13547	482 aa	Predicted RBP	18.5	■□□□□ 0.55
GRN-212	ENST00000588170	DIXDC1	Q155Q3	683 aa		18.5	■□□□□ 0.55
GRN-212	ENST00000588170	CST9	Q5W186	159 aa		18.5	■□□□□ 0.55
GRN-212	ENST00000588170	MRI	Q9BWK5	157 aa		18.5	■□□□□ 0.55
GRN-212	ENST00000588170	CLRN2	A0PK11	232 aa		18.49	■□□□□ 0.55
GRN-212	ENST00000588170	CYP2E1	P05181	493 aa	Predicted RBP	18.49	■□□□□ 0.55
GRN-212	ENST00000588170	ZAP70	P43403	619 aa		18.49	■□□□□ 0.55
GRN-212	ENST00000588170	HDLBP	Q00341	1268 aa	Known RBP	18.49	■□□□□ 0.55
GRN-212	ENST00000588170	PRAMEF18	Q5VWM3	479 aa		18.49	■□□□□ 0.55
GRN-212	ENST00000588170	ZNF384	Q8TF68	577 aa		18.49	■□□□□ 0.55
GRN-212	ENST00000588170	TDRD3	Q9H7E2	651 aa	Known RBP	18.49	■□□□□ 0.55
GRN-212	ENST00000588170	APOBEC3H	Q6NTF7	200 aa	Known RBP	18.48	■□□□□ 0.55
GRN-212	ENST00000588170	TEKT1	Q969V4	418 aa		18.48	■□□□□ 0.55
GRN-212	ENST00000588170	MECOM	Q03112	1051 aa		18.47	■□□□□ 0.55
GRN-212	ENST00000588170	HHIPL2	Q6UWX4	724 aa		18.47	■□□□□ 0.55
GRN-212	ENST00000588170	SULF1	Q8IWU6	871 aa		18.47	■□□□□ 0.55
GRN-212	ENST00000588170	ZGPAT	Q8N5A5	531 aa	Known RBP	18.47	■□□□□ 0.55
GRN-212	ENST00000588170	ZDHHC15	Q96MV8	337 aa		18.47	■□□□□ 0.55
GRN-212	ENST00000588170	PIH1D3	Q9NQM4	214 aa	Known RBP	18.47	■□□□□ 0.55
GRN-212	ENST00000588170	ZNF70	Q9UC06	446 aa	Predicted RBP	18.47	■□□□□ 0.55
GRN-212	ENST00000588170	DAGLA	Q9Y4D2	1042 aa		18.47	■□□□□ 0.55
GRN-212	ENST00000588170	MYO5A	Q9Y4I1	1855 aa	Known RBP	18.47	■□□□□ 0.55
GRN-212	ENST00000588170	PITPNM2	Q9BZ72	1349 aa		18.47	■□□□□ 0.55
GRN-212	ENST00000588170	SPTY2D1	Q68D10	685 aa	Predicted RBP	18.46	■□□□□ 0.55
GRN-212	ENST00000588170	ERICH6	Q7L0X2	663 aa		18.46	■□□□□ 0.55
GRN-212	ENST00000588170	RWDD1	Q9H446	243 aa	Predicted RBP	18.46	■□□□□ 0.55
GRN-212	ENST00000588170	ANTXR1	Q9H6X2	564 aa		18.46	■□□□□ 0.55
GRN-212	ENST00000588170	ZNF408	Q9H9D4	720 aa		18.46	■□□□□ 0.55
GRN-212	ENST00000588170	MAST3	O60307	1309 aa		18.46	■□□□□ 0.55
GRN-212	ENST00000588170	TMEM88B	A6NKF7	163 aa		18.45	■□□□□ 0.54
GRN-212	ENST00000588170	CELF2	O95319	508 aa	Known RBP	18.45	■□□□□ 0.54
GRN-212	ENST00000588170	CACNB3	P54284	484 aa		18.45	■□□□□ 0.54
GRN-212	ENST00000588170	SPDYE2	Q495Y8	402 aa		18.45	■□□□□ 0.54
GRN-212	ENST00000588170	ANKRD45	Q5TZF3	282 aa		18.45	■□□□□ 0.54
GRN-212	ENST00000588170	OTUD7A	Q8TE49	926 aa	Predicted RBP	18.45	■□□□□ 0.54
GRN-212	ENST00000588170	CDCA5	Q96FF9	252 aa		18.45	■□□□□ 0.54
GRN-212	ENST00000588170	VEZT	Q9HBM0	779 aa		18.45	■□□□□ 0.54
GRN-212	ENST00000588170	RAI14	Q9P0K7	980 aa		18.45	■□□□□ 0.54
GRN-212	ENST00000588170	LRP2BP	Q9P2M1	347 aa		18.45	■□□□□ 0.54
GRN-212	ENST00000588170	TRPM7	Q96QT4	1865 aa		18.45	■□□□□ 0.54
GRN-212	ENST00000588170	MYH2	Q9UKX2	1941 aa		18.45	■□□□□ 0.54
GRN-212	ENST00000588170	MYO1B	O43795	1136 aa		18.44	■□□□□ 0.54
GRN-212	ENST00000588170	DZIP1	Q86YF9	867 aa	Known RBP	18.44	■□□□□ 0.54
GRN-212	ENST00000588170	NSUN4	Q96CB9	384 aa	Known RBP	18.44	■□□□□ 0.54
GRN-212	ENST00000588170	GCC1	Q96CN9	775 aa		18.44	■□□□□ 0.54
GRN-212	ENST00000588170	EDC3	Q96F86	508 aa	Known RBP	18.44	■□□□□ 0.54
GRN-212	ENST00000588170	DEFB129	Q9H1M3	183 aa		18.44	■□□□□ 0.54
GRN-212	ENST00000588170	BOLA2	Q9H3K6	86 aa		18.44	■□□□□ 0.54
GRN-212	ENST00000588170	ECM29	Q5VYK3	1845 aa		18.44	■□□□□ 0.54
GRN-212	ENST00000588170	TCP10L2	B9ZVM9	353 aa		18.43	■□□□□ 0.54
GRN-212	ENST00000588170	ATP5J	P18859	108 aa		18.43	■□□□□ 0.54
GRN-212	ENST00000588170	TSHZ3	Q63HK5	1081 aa		18.43	■□□□□ 0.54
GRN-212	ENST00000588170	CDC42EP5	Q6NZY7	148 aa		18.43	■□□□□ 0.54
GRN-212	ENST00000588170	APOBEC3F	Q8IUX4	373 aa	Known RBP	18.43	■□□□□ 0.54
GRN-212	ENST00000588170	CREBZF	Q9NS37	354 aa		18.43	■□□□□ 0.54
GRN-212	ENST00000588170	B4GALNT3	Q6L9W6	998 aa		18.42	■□□□□ 0.54
GRN-212	ENST00000588170	SMC5	Q8IY18	1101 aa		18.42	■□□□□ 0.54
GRN-212	ENST00000588170	DNAJC5G	Q8N7S2	189 aa		18.42	■□□□□ 0.54
GRN-212	ENST00000588170	FAM163A	Q96GL9	167 aa	Predicted RBP	18.42	■□□□□ 0.54
GRN-212	ENST00000588170	GAK	O14976	1311 aa		18.42	■□□□□ 0.54
GRN-212	ENST00000588170	RASA3	Q14644	834 aa		18.41	■□□□□ 0.54
GRN-212	ENST00000588170	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	18.41	■□□□□ 0.54
GRN-212	ENST00000588170	DNAJC2	Q99543	621 aa	Known RBP	18.41	■□□□□ 0.54
GRN-212	ENST00000588170	USP40	Q9NVE5	1235 aa		18.41	■□□□□ 0.54
GRN-212	ENST00000588170	PCNT	O95613	3336 aa		18.4	■□□□□ 0.54
GRN-212	ENST00000588170	GOLIM4	O00461	696 aa		18.4	■□□□□ 0.54
GRN-212	ENST00000588170	MOB2	Q70IA6	237 aa		18.4	■□□□□ 0.54
GRN-212	ENST00000588170	ADGRA1	Q86SQ6	560 aa		18.4	■□□□□ 0.54
GRN-212	ENST00000588170	CDAN1	Q8IWY9	1227 aa		18.4	■□□□□ 0.54
GRN-212	ENST00000588170	HAUS7	Q99871	368 aa		18.4	■□□□□ 0.54
GRN-212	ENST00000588170	ECHDC1	Q9NTX5	307 aa		18.4	■□□□□ 0.54
GRN-212	ENST00000588170	MROH7-TTC4	A0A0A0MT08	1334 aa		18.4	■□□□□ 0.54
GRN-212	ENST00000588170	GPR75-ASB3	A0A0A6YYF3	556 aa		18.39	■□□□□ 0.53
GRN-212	ENST00000588170	IDH1	O75874	414 aa	Known RBP	18.39	■□□□□ 0.53
GRN-212	ENST00000588170	BTD	P43251	543 aa		18.39	■□□□□ 0.53
GRN-212	ENST00000588170	NBPF12	Q5TAG4	269 aa	Predicted RBP	18.39	■□□□□ 0.53
GRN-212	ENST00000588170	NAA16	Q6N069	864 aa	Predicted RBP	18.39	■□□□□ 0.53

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