RNA–Protein interactions for RNA: ENST00000587582.1

CDH20-204, Transcript of cadherin 20, humanhuman

TSL 4

Gene CDH20, Length 533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-204ENST00000587582 PRKG1Q13976 671 aa17.03■□□□□ 0.32
CDH20-204ENST00000587582 TDRD3Q9H7E2 651 aaKnown RBP17.03■□□□□ 0.32
CDH20-204ENST00000587582 AOC2O75106 756 aa17.02■□□□□ 0.32
CDH20-204ENST00000587582 MOB2Q70IA6 237 aa17.02■□□□□ 0.32
CDH20-204ENST00000587582 TEKT1Q969V4 418 aa17.02■□□□□ 0.32
CDH20-204ENST00000587582 DEFB129Q9H1M3 183 aa17.02■□□□□ 0.32
CDH20-204ENST00000587582 DENND2AQ9ULE3 1009 aa17.02■□□□□ 0.32
CDH20-204ENST00000587582 MAST3O60307 1309 aa17.01■□□□□ 0.31
CDH20-204ENST00000587582 RASGRF1Q13972 1273 aa17.01■□□□□ 0.31
CDH20-204ENST00000587582 HHIPL1Q96JK4 782 aa17.01■□□□□ 0.31
CDH20-204ENST00000587582 ZNF70Q9UC06 446 aaPredicted RBP17.01■□□□□ 0.31
CDH20-204ENST00000587582 SEMA3EO15041 775 aa17■□□□□ 0.31
CDH20-204ENST00000587582 LDHBP07195 334 aaKnown RBP17■□□□□ 0.31
CDH20-204ENST00000587582 PRDX5P30044 214 aa17■□□□□ 0.31
CDH20-204ENST00000587582 ZNF157P51786 506 aaPredicted RBP17■□□□□ 0.31
CDH20-204ENST00000587582 RGMBQ6NW40 437 aa17■□□□□ 0.31
CDH20-204ENST00000587582 AIDAQ96BJ3 306 aa17■□□□□ 0.31
CDH20-204ENST00000587582 BCL11AQ9H165 835 aa17■□□□□ 0.31
CDH20-204ENST00000587582 ZBTB4Q9P1Z0 1013 aaPredicted RBP17■□□□□ 0.31
CDH20-204ENST00000587582 ABCF2Q9UG63 623 aa17■□□□□ 0.31
CDH20-204ENST00000587582 EXOC6BQ9Y2D4 811 aa17■□□□□ 0.31
CDH20-204ENST00000587582 ECM29Q5VYK3 1845 aa16.99■□□□□ 0.31
CDH20-204ENST00000587582 TCP10L2B9ZVM9 353 aa16.99■□□□□ 0.31
CDH20-204ENST00000587582 UBE2Q2LH0YL09 131 aa16.99■□□□□ 0.31
CDH20-204ENST00000587582 CACNB3P54284 484 aa16.99■□□□□ 0.31
CDH20-204ENST00000587582 PDE3AQ14432 1141 aa16.99■□□□□ 0.31
CDH20-204ENST00000587582 DIXDC1Q155Q3 683 aa16.99■□□□□ 0.31
CDH20-204ENST00000587582 SPDYE2Q495Y8 402 aa16.99■□□□□ 0.31
CDH20-204ENST00000587582 TNNI3KQ59H18 835 aa16.99■□□□□ 0.31
CDH20-204ENST00000587582 ZBTB40Q9NUA8 1239 aa16.99■□□□□ 0.31
CDH20-204ENST00000587582 FZD1Q9UP38 647 aa16.99■□□□□ 0.31
CDH20-204ENST00000587582 SUGT1Q9Y2Z0 365 aa16.99■□□□□ 0.31
CDH20-204ENST00000587582 FPGT-TNNI3KV9GXZ4 949 aa16.99■□□□□ 0.31
CDH20-204ENST00000587582 PAPPA2Q9BXP8 1791 aa16.99■□□□□ 0.31
CDH20-204ENST00000587582 APBB1O00213 710 aa16.98■□□□□ 0.31
CDH20-204ENST00000587582 FKBP1BP68106 108 aa16.98■□□□□ 0.31
CDH20-204ENST00000587582 HDLBPQ00341 1268 aaKnown RBP16.98■□□□□ 0.31
CDH20-204ENST00000587582 TNFAIP1Q13829 316 aa16.98■□□□□ 0.31
CDH20-204ENST00000587582 RASA3Q14644 834 aa16.98■□□□□ 0.31
CDH20-204ENST00000587582 PI16Q6UXB8 463 aa16.98■□□□□ 0.31
CDH20-204ENST00000587582 CHMP4BQ9H444 224 aaKnown RBP16.98■□□□□ 0.31
CDH20-204ENST00000587582 TMOD2Q9NZR1 351 aa16.98■□□□□ 0.31
CDH20-204ENST00000587582 NOP58Q9Y2X3 529 aaKnown RBP16.98■□□□□ 0.31
CDH20-204ENST00000587582 PCNTO95613 3336 aa16.98■□□□□ 0.31
CDH20-204ENST00000587582 MAP2K1Q02750 393 aaPredicted RBP16.97■□□□□ 0.31
CDH20-204ENST00000587582 TTC39AQ5SRH9 613 aa16.97■□□□□ 0.31
CDH20-204ENST00000587582 DZIP1Q86YF9 867 aaKnown RBP16.97■□□□□ 0.31
CDH20-204ENST00000587582 ZGPATQ8N5A5 531 aaKnown RBP16.97■□□□□ 0.31
CDH20-204ENST00000587582 ZDHHC15Q96MV8 337 aa16.97■□□□□ 0.31
CDH20-204ENST00000587582 DBNDD2Q9BQY9 259 aa16.97■□□□□ 0.31
CDH20-204ENST00000587582 BEGAINQ9BUH8 593 aa16.97■□□□□ 0.31
CDH20-204ENST00000587582 ANGEL1Q9UNK9 670 aaKnown RBP16.97■□□□□ 0.31
CDH20-204ENST00000587582 PPP2R3BQ9Y5P8 575 aa16.97■□□□□ 0.31
CDH20-204ENST00000587582 SALL1Q9NSC2 1324 aa16.96■□□□□ 0.31
CDH20-204ENST00000587582 FOXN1O15353 648 aa16.96■□□□□ 0.31
CDH20-204ENST00000587582 HMMRO75330 724 aa16.96■□□□□ 0.31
CDH20-204ENST00000587582 TNNI2P48788 182 aa16.96■□□□□ 0.31
CDH20-204ENST00000587582 NOGQ13253 232 aa16.96■□□□□ 0.31
CDH20-204ENST00000587582 NBPF12Q5TAG4 269 aaPredicted RBP16.96■□□□□ 0.31
CDH20-204ENST00000587582 APOBEC3HQ6NTF7 200 aaKnown RBP16.96■□□□□ 0.31
CDH20-204ENST00000587582 HHIPL2Q6UWX4 724 aa16.96■□□□□ 0.31
CDH20-204ENST00000587582 ARMC9Q7Z3E5 817 aa16.96■□□□□ 0.31
CDH20-204ENST00000587582 ZIC5Q96T25 663 aa16.96■□□□□ 0.31
CDH20-204ENST00000587582 TMEM39BQ9GZU3 492 aa16.96■□□□□ 0.31
CDH20-204ENST00000587582 CCDC8Q9H0W5 538 aaPredicted RBP16.96■□□□□ 0.31
CDH20-204ENST00000587582 GPR108Q9NPR9 543 aa16.96■□□□□ 0.31
CDH20-204ENST00000587582 WBP1LQ9NX94 342 aa16.96■□□□□ 0.31
CDH20-204ENST00000587582 HMG20BQ9P0W2 317 aa16.96■□□□□ 0.31
CDH20-204ENST00000587582 DAGLAQ9Y4D2 1042 aa16.96■□□□□ 0.31
CDH20-204ENST00000587582 THSD7BQ9C0I4 1608 aa16.96■□□□□ 0.3
CDH20-204ENST00000587582 ARID4AP29374 1257 aaPredicted RBP16.95■□□□□ 0.3
CDH20-204ENST00000587582 MAP2K2P36507 400 aa16.95■□□□□ 0.3
CDH20-204ENST00000587582 SUPT20HL1Q3ZLR7 823 aa16.95■□□□□ 0.3
CDH20-204ENST00000587582 CCDC158Q5M9N0 1113 aa16.95■□□□□ 0.3
CDH20-204ENST00000587582 ERC1Q8IUD2 1116 aa16.95■□□□□ 0.3
CDH20-204ENST00000587582 CDAN1Q8IWY9 1227 aa16.95■□□□□ 0.3
CDH20-204ENST00000587582 RPAP2Q8IXW5 612 aaPredicted RBP16.95■□□□□ 0.3
CDH20-204ENST00000587582 SPATA5Q8NB90 893 aa16.95■□□□□ 0.3
CDH20-204ENST00000587582 CCDC102AQ96A19 550 aa16.95■□□□□ 0.3
CDH20-204ENST00000587582 TLR7Q9NYK1 1049 aaKnown RBP16.95■□□□□ 0.3
CDH20-204ENST00000587582 SSC5DA1L4H1 1573 aa16.94■□□□□ 0.3
CDH20-204ENST00000587582 FAM155AB1AL88 458 aaPredicted RBP16.94■□□□□ 0.3
CDH20-204ENST00000587582 SLC10A3P09131 477 aa16.94■□□□□ 0.3
CDH20-204ENST00000587582 UQCRFS1P1P0C7P4 283 aa16.94■□□□□ 0.3
CDH20-204ENST00000587582 MCAMP43121 646 aa16.94■□□□□ 0.3
CDH20-204ENST00000587582 MKRN3Q13064 507 aaKnown RBP16.94■□□□□ 0.3
CDH20-204ENST00000587582 SPTY2D1Q68D10 685 aaPredicted RBP16.94■□□□□ 0.3
CDH20-204ENST00000587582 TBC1D9Q6ZT07 1266 aa16.94■□□□□ 0.3
CDH20-204ENST00000587582 RASAL3Q86YV0 1011 aa16.94■□□□□ 0.3
CDH20-204ENST00000587582 SIRT2Q8IXJ6 389 aa16.94■□□□□ 0.3
CDH20-204ENST00000587582 EAF2Q96CJ1 260 aaPredicted RBP16.94■□□□□ 0.3
CDH20-204ENST00000587582 MRIQ9BWK5 157 aa16.94■□□□□ 0.3
CDH20-204ENST00000587582 IL1RAPL2Q9NP60 686 aa16.94■□□□□ 0.3
CDH20-204ENST00000587582 SNRKQ9NRH2 765 aa16.94■□□□□ 0.3
CDH20-204ENST00000587582 DBNLQ9UJU6 430 aaKnown RBP16.94■□□□□ 0.3
CDH20-204ENST00000587582 PDS5AQ29RF7 1337 aaKnown RBP16.94■□□□□ 0.3
CDH20-204ENST00000587582 PPP1R12BO60237 982 aaPredicted RBP16.93■□□□□ 0.3
CDH20-204ENST00000587582 RRP1P56182 461 aaKnown RBP16.93■□□□□ 0.3
CDH20-204ENST00000587582 HSP90AB4PQ58FF6 505 aa16.93■□□□□ 0.3
CDH20-204ENST00000587582 ERICH6Q7L0X2 663 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms