RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 SUGT1Q9Y2Z0 365 aa18.27■□□□□ 0.52
ATG4D-207ENST00000587256 WDR33Q9C0J8 1336 aaKnown RBP18.26■□□□□ 0.51
ATG4D-207ENST00000587256 HMMRO75330 724 aa18.26■□□□□ 0.51
ATG4D-207ENST00000587256 NF2P35240 595 aa18.26■□□□□ 0.51
ATG4D-207ENST00000587256 RASGRF1Q13972 1273 aa18.26■□□□□ 0.51
ATG4D-207ENST00000587256 PRAMEF18Q5VWM3 479 aa18.26■□□□□ 0.51
ATG4D-207ENST00000587256 CYP4F22Q6NT55 531 aa18.26■□□□□ 0.51
ATG4D-207ENST00000587256 NOP58Q9Y2X3 529 aaKnown RBP18.26■□□□□ 0.51
ATG4D-207ENST00000587256 PAPPA2Q9BXP8 1791 aa18.26■□□□□ 0.51
ATG4D-207ENST00000587256 AOX1Q06278 1338 aa18.25■□□□□ 0.51
ATG4D-207ENST00000587256 HDLBPQ00341 1268 aaKnown RBP18.25■□□□□ 0.51
ATG4D-207ENST00000587256 TNNI3KQ59H18 835 aa18.25■□□□□ 0.51
ATG4D-207ENST00000587256 RPAP2Q8IXW5 612 aaPredicted RBP18.25■□□□□ 0.51
ATG4D-207ENST00000587256 HHIPL1Q96JK4 782 aa18.25■□□□□ 0.51
ATG4D-207ENST00000587256 GPR108Q9NPR9 543 aa18.25■□□□□ 0.51
ATG4D-207ENST00000587256 EXOC6BQ9Y2D4 811 aa18.25■□□□□ 0.51
ATG4D-207ENST00000587256 FPGT-TNNI3KV9GXZ4 949 aa18.25■□□□□ 0.51
ATG4D-207ENST00000587256 PDS5AQ29RF7 1337 aaKnown RBP18.24■□□□□ 0.51
ATG4D-207ENST00000587256 THSD7BQ9C0I4 1608 aa18.24■□□□□ 0.51
ATG4D-207ENST00000587256 LDHBP07195 334 aaKnown RBP18.24■□□□□ 0.51
ATG4D-207ENST00000587256 PRDX5P30044 214 aa18.24■□□□□ 0.51
ATG4D-207ENST00000587256 RRP1P56182 461 aaKnown RBP18.24■□□□□ 0.51
ATG4D-207ENST00000587256 TTLL12Q14166 644 aaPredicted RBP18.24■□□□□ 0.51
ATG4D-207ENST00000587256 SPDYE2Q495Y8 402 aa18.24■□□□□ 0.51
ATG4D-207ENST00000587256 ERC1Q8IUD2 1116 aa18.24■□□□□ 0.51
ATG4D-207ENST00000587256 ZGPATQ8N5A5 531 aaKnown RBP18.24■□□□□ 0.51
ATG4D-207ENST00000587256 DEFB129Q9H1M3 183 aa18.24■□□□□ 0.51
ATG4D-207ENST00000587256 TDRD3Q9H7E2 651 aaKnown RBP18.24■□□□□ 0.51
ATG4D-207ENST00000587256 PPP2R3BQ9Y5P8 575 aa18.24■□□□□ 0.51
ATG4D-207ENST00000587256 SALL1Q9NSC2 1324 aa18.23■□□□□ 0.51
ATG4D-207ENST00000587256 FKBP1BP68106 108 aa18.23■□□□□ 0.51
ATG4D-207ENST00000587256 TNFAIP1Q13829 316 aa18.23■□□□□ 0.51
ATG4D-207ENST00000587256 HSP90AB4PQ58FF6 505 aa18.23■□□□□ 0.51
ATG4D-207ENST00000587256 TMOD2Q9NZR1 351 aa18.23■□□□□ 0.51
ATG4D-207ENST00000587256 ZNF70Q9UC06 446 aaPredicted RBP18.23■□□□□ 0.51
ATG4D-207ENST00000587256 ZBTB22O15209 634 aa18.22■□□□□ 0.51
ATG4D-207ENST00000587256 HSPA1AP0DMV8 641 aaKnown RBP18.22■□□□□ 0.51
ATG4D-207ENST00000587256 HSPA1BP0DMV9 641 aaKnown RBP18.22■□□□□ 0.51
ATG4D-207ENST00000587256 DIXDC1Q155Q3 683 aa18.22■□□□□ 0.51
ATG4D-207ENST00000587256 TTC39AQ5SRH9 613 aa18.22■□□□□ 0.51
ATG4D-207ENST00000587256 ZDHHC15Q96MV8 337 aa18.22■□□□□ 0.51
ATG4D-207ENST00000587256 DBNDD2Q9BQY9 259 aa18.22■□□□□ 0.51
ATG4D-207ENST00000587256 ABCF2Q9UG63 623 aa18.22■□□□□ 0.51
ATG4D-207ENST00000587256 UQCRFS1P1P0C7P4 283 aa18.21■□□□□ 0.51
ATG4D-207ENST00000587256 ARID4AP29374 1257 aaPredicted RBP18.21■□□□□ 0.51
ATG4D-207ENST00000587256 CCDC158Q5M9N0 1113 aa18.21■□□□□ 0.51
ATG4D-207ENST00000587256 RGMBQ6NW40 437 aa18.21■□□□□ 0.51
ATG4D-207ENST00000587256 HHIPL2Q6UWX4 724 aa18.21■□□□□ 0.51
ATG4D-207ENST00000587256 DZIP1Q86YF9 867 aaKnown RBP18.21■□□□□ 0.51
ATG4D-207ENST00000587256 SPATA5Q8NB90 893 aa18.21■□□□□ 0.51
ATG4D-207ENST00000587256 TCP10L2B9ZVM9 353 aa18.2■□□□□ 0.5
ATG4D-207ENST00000587256 APBB1O00213 710 aa18.2■□□□□ 0.5
ATG4D-207ENST00000587256 TNNI2P48788 182 aa18.2■□□□□ 0.5
ATG4D-207ENST00000587256 PRKG1Q13976 671 aa18.2■□□□□ 0.5
ATG4D-207ENST00000587256 RASA3Q14644 834 aa18.2■□□□□ 0.5
ATG4D-207ENST00000587256 SPTY2D1Q68D10 685 aaPredicted RBP18.2■□□□□ 0.5
ATG4D-207ENST00000587256 PI16Q6UXB8 463 aa18.2■□□□□ 0.5
ATG4D-207ENST00000587256 MOB2Q70IA6 237 aa18.2■□□□□ 0.5
ATG4D-207ENST00000587256 MRIQ9BWK5 157 aa18.2■□□□□ 0.5
ATG4D-207ENST00000587256 HMG20BQ9P0W2 317 aa18.2■□□□□ 0.5
ATG4D-207ENST00000587256 SSC5DA1L4H1 1573 aa18.19■□□□□ 0.5
ATG4D-207ENST00000587256 AOC2O75106 756 aa18.19■□□□□ 0.5
ATG4D-207ENST00000587256 ZNF157P51786 506 aaPredicted RBP18.19■□□□□ 0.5
ATG4D-207ENST00000587256 CACNB3P54284 484 aa18.19■□□□□ 0.5
ATG4D-207ENST00000587256 AACSQ86V21 672 aa18.19■□□□□ 0.5
ATG4D-207ENST00000587256 SIRT2Q8IXJ6 389 aa18.19■□□□□ 0.5
ATG4D-207ENST00000587256 AIDAQ96BJ3 306 aa18.19■□□□□ 0.5
ATG4D-207ENST00000587256 TLR7Q9NYK1 1049 aaKnown RBP18.19■□□□□ 0.5
ATG4D-207ENST00000587256 DBNLQ9UJU6 430 aaKnown RBP18.19■□□□□ 0.5
ATG4D-207ENST00000587256 DAGLAQ9Y4D2 1042 aa18.19■□□□□ 0.5
ATG4D-207ENST00000587256 MCAMP43121 646 aa18.18■□□□□ 0.5
ATG4D-207ENST00000587256 NOGQ13253 232 aa18.18■□□□□ 0.5
ATG4D-207ENST00000587256 SUPT20HL1Q3ZLR7 823 aa18.18■□□□□ 0.5
ATG4D-207ENST00000587256 APOBEC3HQ6NTF7 200 aaKnown RBP18.18■□□□□ 0.5
ATG4D-207ENST00000587256 ARMC9Q7Z3E5 817 aa18.18■□□□□ 0.5
ATG4D-207ENST00000587256 RHPN1Q8TCX5 695 aa18.18■□□□□ 0.5
ATG4D-207ENST00000587256 EAF2Q96CJ1 260 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-207ENST00000587256 CCDC8Q9H0W5 538 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-207ENST00000587256 IL1RAPL2Q9NP60 686 aa18.18■□□□□ 0.5
ATG4D-207ENST00000587256 UBE2Q2LH0YL09 131 aa18.17■□□□□ 0.5
ATG4D-207ENST00000587256 MAP2K1Q02750 393 aaPredicted RBP18.17■□□□□ 0.5
ATG4D-207ENST00000587256 ERICH6Q7L0X2 663 aa18.17■□□□□ 0.5
ATG4D-207ENST00000587256 SLF2Q8IX21 1173 aa18.17■□□□□ 0.5
ATG4D-207ENST00000587256 CCDC102AQ96A19 550 aa18.17■□□□□ 0.5
ATG4D-207ENST00000587256 KIF1BPQ96EK5 621 aa18.17■□□□□ 0.5
ATG4D-207ENST00000587256 BCL11AQ9H165 835 aa18.17■□□□□ 0.5
ATG4D-207ENST00000587256 ANGEL1Q9UNK9 670 aaKnown RBP18.17■□□□□ 0.5
ATG4D-207ENST00000587256 PCNTO95613 3336 aa18.17■□□□□ 0.5
ATG4D-207ENST00000587256 MAP2K2P36507 400 aa18.16■□□□□ 0.5
ATG4D-207ENST00000587256 NBPF12Q5TAG4 269 aaPredicted RBP18.16■□□□□ 0.5
ATG4D-207ENST00000587256 BEGAINQ9BUH8 593 aa18.16■□□□□ 0.5
ATG4D-207ENST00000587256 TMEM39BQ9GZU3 492 aa18.16■□□□□ 0.5
ATG4D-207ENST00000587256 SNRKQ9NRH2 765 aa18.16■□□□□ 0.5
ATG4D-207ENST00000587256 RAI14Q9P0K7 980 aa18.16■□□□□ 0.5
ATG4D-207ENST00000587256 MAST2Q6P0Q8 1798 aa18.15■□□□□ 0.5
ATG4D-207ENST00000587256 PPP1R12BO60237 982 aaPredicted RBP18.15■□□□□ 0.5
ATG4D-207ENST00000587256 RAB11FIP3O75154 756 aa18.15■□□□□ 0.5
ATG4D-207ENST00000587256 SLC10A3P09131 477 aa18.15■□□□□ 0.5
ATG4D-207ENST00000587256 TBC1D9Q6ZT07 1266 aa18.15■□□□□ 0.5
ATG4D-207ENST00000587256 CLASRPQ8N2M8 674 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms