RNA–Protein interactions for RNA: ENST00000587235.5

TCF3-210, Transcript of transcription factor 3, human

TSL 5

Gene TCF3, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-210	ENST00000587235	IPO8	O15397	1037 aa	Known RBP	31.57	■■■□□ 2.64
TCF3-210	ENST00000587235	TBC1D8	O95759	1140 aa		31.57	■■■□□ 2.64
TCF3-210	ENST00000587235	SSC5D	A1L4H1	1573 aa		31.56	■■■□□ 2.64
TCF3-210	ENST00000587235	SREBF2	Q12772	1141 aa		31.56	■■■□□ 2.64
TCF3-210	ENST00000587235	TNFAIP1	Q13829	316 aa		31.55	■■■□□ 2.64
TCF3-210	ENST00000587235	ATG9A	Q7Z3C6	839 aa		31.55	■■■□□ 2.64
TCF3-210	ENST00000587235	CLMN	Q96JQ2	1002 aa		31.55	■■■□□ 2.64
TCF3-210	ENST00000587235	USP2	O75604	605 aa	Predicted RBP	31.54	■■■□□ 2.64
TCF3-210	ENST00000587235	ZBED9	Q6R2W3	1325 aa		31.53	■■■□□ 2.64
TCF3-210	ENST00000587235	SLC5A1	P13866	664 aa		31.53	■■■□□ 2.64
TCF3-210	ENST00000587235	HDLBP	Q00341	1268 aa	Known RBP	31.53	■■■□□ 2.64
TCF3-210	ENST00000587235	LPIN2	Q92539	896 aa		31.53	■■■□□ 2.64
TCF3-210	ENST00000587235	SIL1	Q9H173	461 aa		31.53	■■■□□ 2.64
TCF3-210	ENST00000587235	UNCX	A6NJT0	531 aa		31.52	■■■□□ 2.64
TCF3-210	ENST00000587235	IREB2	P48200	963 aa	Known RBP	31.52	■■■□□ 2.64
TCF3-210	ENST00000587235	LRRFIP2	Q9Y608	721 aa	Known RBP	31.52	■■■□□ 2.64
TCF3-210	ENST00000587235	TCP10L2	B9ZVM9	353 aa		31.51	■■■□□ 2.63
TCF3-210	ENST00000587235	FBXO3	Q9UK99	471 aa		31.51	■■■□□ 2.63
TCF3-210	ENST00000587235	CIAO1	O76071	339 aa		31.5	■■■□□ 2.63
TCF3-210	ENST00000587235	CTU1	Q7Z7A3	348 aa	Known RBP	31.5	■■■□□ 2.63
TCF3-210	ENST00000587235	TEKT1	Q969V4	418 aa		31.5	■■■□□ 2.63
TCF3-210	ENST00000587235	WNK4	Q96J92	1243 aa		31.5	■■■□□ 2.63
TCF3-210	ENST00000587235	MRI	Q9BWK5	157 aa		31.5	■■■□□ 2.63
TCF3-210	ENST00000587235	CEP126	Q9P2H0	1117 aa		31.5	■■■□□ 2.63
TCF3-210	ENST00000587235	ARAP2	Q8WZ64	1704 aa		31.49	■■■□□ 2.63
TCF3-210	ENST00000587235	MANSC4	A6NHS7	340 aa	Predicted RBP	31.49	■■■□□ 2.63
TCF3-210	ENST00000587235	INTS3	Q68E01	1043 aa	Known RBP	31.49	■■■□□ 2.63
TCF3-210	ENST00000587235	ZNF296	Q8WUU4	475 aa	Predicted RBP	31.49	■■■□□ 2.63
TCF3-210	ENST00000587235	TEPSIN	Q96N21	525 aa		31.49	■■■□□ 2.63
TCF3-210	ENST00000587235	MEIS3	Q99687	375 aa		31.49	■■■□□ 2.63
TCF3-210	ENST00000587235	SUGT1	Q9Y2Z0	365 aa		31.49	■■■□□ 2.63
TCF3-210	ENST00000587235	ZBTB48	P10074	688 aa	Predicted RBP	31.48	■■■□□ 2.63
TCF3-210	ENST00000587235	TNNI2	P48788	182 aa		31.48	■■■□□ 2.63
TCF3-210	ENST00000587235	INHBE	P58166	350 aa		31.48	■■■□□ 2.63
TCF3-210	ENST00000587235	TMEM39B	Q9GZU3	492 aa		31.48	■■■□□ 2.63
TCF3-210	ENST00000587235	CDAN1	Q8IWY9	1227 aa		31.47	■■■□□ 2.63
TCF3-210	ENST00000587235	ANKRD13A	Q8IZ07	590 aa		31.47	■■■□□ 2.63
TCF3-210	ENST00000587235	ZDHHC15	Q96MV8	337 aa		31.47	■■■□□ 2.63
TCF3-210	ENST00000587235	PA2G4	Q9UQ80	394 aa	Known RBP	31.47	■■■□□ 2.63
TCF3-210	ENST00000587235	GPR25	O00155	361 aa		31.46	■■■□□ 2.63
TCF3-210	ENST00000587235	RGS19	P49795	217 aa		31.46	■■■□□ 2.63
TCF3-210	ENST00000587235	ATP2B3	Q16720	1220 aa		31.46	■■■□□ 2.63
TCF3-210	ENST00000587235	ATF7IP	Q6VMQ6	1270 aa		31.46	■■■□□ 2.63
TCF3-210	ENST00000587235	WDR66	Q8TBY9	1149 aa		31.46	■■■□□ 2.63
TCF3-210	ENST00000587235	R3HDML	Q9H3Y0	253 aa		31.46	■■■□□ 2.63
TCF3-210	ENST00000587235	BCAR3	O75815	825 aa		31.45	■■■□□ 2.63
TCF3-210	ENST00000587235	NOM1	Q5C9Z4	860 aa	Known RBP	31.45	■■■□□ 2.63
TCF3-210	ENST00000587235	CFHR5	Q9BXR6	569 aa		31.45	■■■□□ 2.63
TCF3-210	ENST00000587235	TNN	Q9UQP3	1299 aa		31.45	■■■□□ 2.63
TCF3-210	ENST00000587235	MAST3	O60307	1309 aa		31.45	■■■□□ 2.62
TCF3-210	ENST00000587235	ALDH1A1	P00352	501 aa		31.44	■■■□□ 2.62
TCF3-210	ENST00000587235	IL15	P40933	162 aa	Predicted RBP	31.44	■■■□□ 2.62
TCF3-210	ENST00000587235	CACNB3	P54284	484 aa		31.44	■■■□□ 2.62
TCF3-210	ENST00000587235	APOBEC3H	Q6NTF7	200 aa	Known RBP	31.44	■■■□□ 2.62
TCF3-210	ENST00000587235	IFNL1	Q8IU54	200 aa		31.44	■■■□□ 2.62
TCF3-210	ENST00000587235	GNAI3	P08754	354 aa		31.43	■■■□□ 2.62
TCF3-210	ENST00000587235	TRIM27	P14373	513 aa		31.43	■■■□□ 2.62
TCF3-210	ENST00000587235	GJA5	P36382	358 aa		31.43	■■■□□ 2.62
TCF3-210	ENST00000587235	HHIPL2	Q6UWX4	724 aa		31.43	■■■□□ 2.62
TCF3-210	ENST00000587235	COPRS	Q9NQ92	184 aa		31.43	■■■□□ 2.62
TCF3-210	ENST00000587235	FRAT1	Q92837	279 aa	Predicted RBP	31.42	■■■□□ 2.62
TCF3-210	ENST00000587235	MLLT1	Q03111	559 aa	Predicted RBP	31.41	■■■□□ 2.62
TCF3-210	ENST00000587235	ELP3	Q9H9T3	547 aa		31.41	■■■□□ 2.62
TCF3-210	ENST00000587235	GNL3L	Q9NVN8	582 aa	Known RBP	31.41	■■■□□ 2.62
TCF3-210	ENST00000587235	TMOD2	Q9NZR1	351 aa		31.41	■■■□□ 2.62
TCF3-210	ENST00000587235	FKTN	O75072	461 aa		31.4	■■■□□ 2.62
TCF3-210	ENST00000587235	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	31.4	■■■□□ 2.62
TCF3-210	ENST00000587235	IGF2BP3	O00425	579 aa	Known RBP eCLIP	31.39	■■■□□ 2.62
TCF3-210	ENST00000587235	MAP3K9	P80192	1104 aa		31.39	■■■□□ 2.62
TCF3-210	ENST00000587235	PKN2	Q16513	984 aa	Known RBP	31.39	■■■□□ 2.62
TCF3-210	ENST00000587235	ZKSCAN2	Q63HK3	967 aa		31.39	■■■□□ 2.62
TCF3-210	ENST00000587235	FKBP1C	Q5VVH2	108 aa		31.38	■■■□□ 2.61
TCF3-210	ENST00000587235	FAM83A	Q86UY5	434 aa		31.38	■■■□□ 2.61
TCF3-210	ENST00000587235	OPTN	Q96CV9	577 aa		31.38	■■■□□ 2.61
TCF3-210	ENST00000587235	SRGAP3	O43295	1099 aa		31.37	■■■□□ 2.61
TCF3-210	ENST00000587235	PHKA1	P46020	1223 aa		31.37	■■■□□ 2.61
TCF3-210	ENST00000587235	ADORA1	P30542	326 aa		31.36	■■■□□ 2.61
TCF3-210	ENST00000587235	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	31.36	■■■□□ 2.61
TCF3-210	ENST00000587235	DENND2A	Q9ULE3	1009 aa		31.36	■■■□□ 2.61
TCF3-210	ENST00000587235	PRDX5	P30044	214 aa		31.35	■■■□□ 2.61
TCF3-210	ENST00000587235	TIMM10	P62072	90 aa		31.35	■■■□□ 2.61
TCF3-210	ENST00000587235	VGLL4	Q14135	290 aa		31.35	■■■□□ 2.61
TCF3-210	ENST00000587235	OTUD7B	Q6GQQ9	843 aa		31.35	■■■□□ 2.61
TCF3-210	ENST00000587235	HPS5	Q9UPZ3	1129 aa		31.35	■■■□□ 2.61
TCF3-210	ENST00000587235	MYH13	Q9UKX3	1938 aa		31.34	■■■□□ 2.61
TCF3-210	ENST00000587235	TESPA1	A2RU30	521 aa	Predicted RBP	31.34	■■■□□ 2.61
TCF3-210	ENST00000587235	SEMA3E	O15041	775 aa		31.34	■■■□□ 2.61
TCF3-210	ENST00000587235	LDHB	P07195	334 aa	Known RBP	31.34	■■■□□ 2.61
TCF3-210	ENST00000587235	MTX1	Q13505	466 aa		31.34	■■■□□ 2.61
TCF3-210	ENST00000587235	DIXDC1	Q155Q3	683 aa		31.34	■■■□□ 2.61
TCF3-210	ENST00000587235	CNKSR2	Q8WXI2	1034 aa		31.34	■■■□□ 2.61
TCF3-210	ENST00000587235	CLUAP1	Q96AJ1	413 aa		31.34	■■■□□ 2.61
TCF3-210	ENST00000587235	PTPN18	Q99952	460 aa		31.34	■■■□□ 2.61
TCF3-210	ENST00000587235	DAGLA	Q9Y4D2	1042 aa		31.34	■■■□□ 2.61
TCF3-210	ENST00000587235	CSAD	Q9Y600	493 aa		31.34	■■■□□ 2.61
TCF3-210	ENST00000587235	CCDC102B	Q68D86	513 aa		31.33	■■■□□ 2.61
TCF3-210	ENST00000587235	OTOF	Q9HC10	1997 aa		31.32	■■■□□ 2.6
TCF3-210	ENST00000587235	SALL1	Q9NSC2	1324 aa		31.32	■■■□□ 2.6
TCF3-210	ENST00000587235	HOOK2	Q96ED9	719 aa		31.32	■■■□□ 2.6
TCF3-210	ENST00000587235	MS4A4A	Q96JQ5	239 aa		31.32	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms