RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 SUCLG2Q96I99 432 aa20.68■□□□□ 0.9
NPC1-205ENST00000587163 CENPFP49454 3210 aa20.68■□□□□ 0.9
NPC1-205ENST00000587163 TCP10L2B9ZVM9 353 aa20.67■□□□□ 0.9
NPC1-205ENST00000587163 ALDH1L1O75891 902 aa20.67■□□□□ 0.9
NPC1-205ENST00000587163 TNFAIP1Q13829 316 aa20.67■□□□□ 0.9
NPC1-205ENST00000587163 TMEM39BQ9GZU3 492 aa20.67■□□□□ 0.9
NPC1-205ENST00000587163 EFCC1Q9HA90 598 aa20.67■□□□□ 0.9
NPC1-205ENST00000587163 RIPOR2Q9Y4F9 1068 aa20.67■□□□□ 0.9
NPC1-205ENST00000587163 MKI67P46013 3256 aaKnown RBP20.66■□□□□ 0.9
NPC1-205ENST00000587163 SP3Q02447 781 aa20.66■□□□□ 0.9
NPC1-205ENST00000587163 SRCIN1Q9C0H9 1055 aa20.66■□□□□ 0.9
NPC1-205ENST00000587163 NBPF7P0C2Y1 421 aaPredicted RBP20.65■□□□□ 0.9
NPC1-205ENST00000587163 CRKP46108 304 aa20.65■□□□□ 0.9
NPC1-205ENST00000587163 BRI3BPQ8WY22 251 aa20.65■□□□□ 0.9
NPC1-205ENST00000587163 ARMC5Q96C12 935 aa20.65■□□□□ 0.9
NPC1-205ENST00000587163 IQSEC3Q9UPP2 1182 aaPredicted RBP20.65■□□□□ 0.9
NPC1-205ENST00000587163 EN2P19622 333 aaPredicted RBP20.64■□□□□ 0.89
NPC1-205ENST00000587163 VGLL4Q14135 290 aa20.64■□□□□ 0.89
NPC1-205ENST00000587163 FBXO33Q7Z6M2 555 aa20.64■□□□□ 0.89
NPC1-205ENST00000587163 MAP3K9P80192 1104 aa20.63■□□□□ 0.89
NPC1-205ENST00000587163 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.63■□□□□ 0.89
NPC1-205ENST00000587163 ARAP2Q8WZ64 1704 aa20.63■□□□□ 0.89
NPC1-205ENST00000587163 MROH5Q6ZUA9 1318 aa20.62■□□□□ 0.89
NPC1-205ENST00000587163 CCL15-CCL14A0A0B4J2E2 113 aa20.62■□□□□ 0.89
NPC1-205ENST00000587163 CACNB3P54284 484 aa20.62■□□□□ 0.89
NPC1-205ENST00000587163 CHAF1AQ13111 956 aaPredicted RBP20.62■□□□□ 0.89
NPC1-205ENST00000587163 CCL15Q16663 113 aa20.62■□□□□ 0.89
NPC1-205ENST00000587163 LRRC24Q50LG9 513 aa20.62■□□□□ 0.89
NPC1-205ENST00000587163 RBBP6Q7Z6E9 1792 aaKnown RBP20.62■□□□□ 0.89
NPC1-205ENST00000587163 UTYO14607 1347 aa20.61■□□□□ 0.89
NPC1-205ENST00000587163 TNNI2P48788 182 aa20.61■□□□□ 0.89
NPC1-205ENST00000587163 FAM43AQ8N2R8 423 aa20.61■□□□□ 0.89
NPC1-205ENST00000587163 OTUD5Q96G74 571 aa20.61■□□□□ 0.89
NPC1-205ENST00000587163 BICC1Q9H694 974 aaKnown RBP20.61■□□□□ 0.89
NPC1-205ENST00000587163 BRCA2P51587 3418 aa20.61■□□□□ 0.89
NPC1-205ENST00000587163 KIAA0100Q14667 2235 aaKnown RBP20.61■□□□□ 0.89
NPC1-205ENST00000587163 GTF2A2P52657 109 aa20.6■□□□□ 0.89
NPC1-205ENST00000587163 TAF1CQ15572 869 aaPredicted RBP20.6■□□□□ 0.89
NPC1-205ENST00000587163 VPS37DQ86XT2 251 aa20.6■□□□□ 0.89
NPC1-205ENST00000587163 ANKRD44Q8N8A2 993 aa20.6■□□□□ 0.89
NPC1-205ENST00000587163 HDLBPQ00341 1268 aaKnown RBP20.59■□□□□ 0.89
NPC1-205ENST00000587163 RABL6Q3YEC7 729 aaPredicted RBP20.59■□□□□ 0.89
NPC1-205ENST00000587163 HABP4Q5JVS0 413 aaKnown RBP20.59■□□□□ 0.89
NPC1-205ENST00000587163 VGLL2Q8N8G2 317 aa20.59■□□□□ 0.89
NPC1-205ENST00000587163 GCC1Q96CN9 775 aa20.59■□□□□ 0.89
NPC1-205ENST00000587163 ZFYVE28Q9HCC9 887 aa20.59■□□□□ 0.89
NPC1-205ENST00000587163 CSADQ9Y600 493 aa20.59■□□□□ 0.89
NPC1-205ENST00000587163 BCAMP50895 628 aa20.58■□□□□ 0.89
NPC1-205ENST00000587163 METTL24Q5JXM2 366 aa20.58■□□□□ 0.89
NPC1-205ENST00000587163 KLHDC4Q8TBB5 520 aa20.58■□□□□ 0.89
NPC1-205ENST00000587163 ZNF333Q96JL9 665 aa20.58■□□□□ 0.89
NPC1-205ENST00000587163 PTCH2Q9Y6C5 1203 aa20.58■□□□□ 0.89
NPC1-205ENST00000587163 SNCAIPQ9Y6H5 919 aa20.58■□□□□ 0.89
NPC1-205ENST00000587163 SPDYE5A6NIY4 337 aa20.57■□□□□ 0.88
NPC1-205ENST00000587163 FRAT2O75474 233 aaPredicted RBP20.57■□□□□ 0.88
NPC1-205ENST00000587163 PDE8BO95263 885 aa20.57■□□□□ 0.88
NPC1-205ENST00000587163 CAVIN4Q5BKX8 364 aa20.57■□□□□ 0.88
NPC1-205ENST00000587163 TBC1D22AQ8WUA7 517 aa20.57■□□□□ 0.88
NPC1-205ENST00000587163 ZKSCAN4Q969J2 545 aaPredicted RBP20.57■□□□□ 0.88
NPC1-205ENST00000587163 TEKT1Q969V4 418 aa20.57■□□□□ 0.88
NPC1-205ENST00000587163 ANP32CO43423 234 aa20.56■□□□□ 0.88
NPC1-205ENST00000587163 APOBEC3HQ6NTF7 200 aaKnown RBP20.56■□□□□ 0.88
NPC1-205ENST00000587163 ZDHHC15Q96MV8 337 aa20.56■□□□□ 0.88
NPC1-205ENST00000587163 MRIQ9BWK5 157 aa20.56■□□□□ 0.88
NPC1-205ENST00000587163 ARHGAP39Q9C0H5 1083 aa20.56■□□□□ 0.88
NPC1-205ENST00000587163 SLC9C1Q4G0N8 1177 aa20.55■□□□□ 0.88
NPC1-205ENST00000587163 ERO1BQ86YB8 467 aa20.55■□□□□ 0.88
NPC1-205ENST00000587163 MRPL50Q8N5N7 158 aaKnown RBP20.55■□□□□ 0.88
NPC1-205ENST00000587163 WRNIP1Q96S55 665 aa20.55■□□□□ 0.88
NPC1-205ENST00000587163 TMEM106CQ9BVX2 250 aa20.55■□□□□ 0.88
NPC1-205ENST00000587163 ZSWIM8A7E2V4 1837 aa20.55■□□□□ 0.88
NPC1-205ENST00000587163 BTBD19C9JJ37 291 aa20.54■□□□□ 0.88
NPC1-205ENST00000587163 IRF6O14896 467 aa20.54■□□□□ 0.88
NPC1-205ENST00000587163 ARHGEF6Q15052 776 aa20.54■□□□□ 0.88
NPC1-205ENST00000587163 FAM83AQ86UY5 434 aa20.54■□□□□ 0.88
NPC1-205ENST00000587163 FAM9BQ8IZU0 186 aa20.54■□□□□ 0.88
NPC1-205ENST00000587163 TLR2O60603 784 aa20.53■□□□□ 0.88
NPC1-205ENST00000587163 MYCP01106 439 aaPredicted RBP20.53■□□□□ 0.88
NPC1-205ENST00000587163 CETPP11597 493 aa20.53■□□□□ 0.88
NPC1-205ENST00000587163 FGFR2P21802 821 aa20.53■□□□□ 0.88
NPC1-205ENST00000587163 FKBP1CQ5VVH2 108 aa20.53■□□□□ 0.88
NPC1-205ENST00000587163 NBPF11Q86T75 865 aa20.53■□□□□ 0.88
NPC1-205ENST00000587163 MIGA2Q7L4E1 593 aa20.52■□□□□ 0.88
NPC1-205ENST00000587163 USP44Q9H0E7 712 aa20.52■□□□□ 0.88
NPC1-205ENST00000587163 TMOD2Q9NZR1 351 aa20.52■□□□□ 0.88
NPC1-205ENST00000587163 ZNF521Q96K83 1311 aa20.52■□□□□ 0.87
NPC1-205ENST00000587163 LACTBP83111 547 aaPredicted RBP20.51■□□□□ 0.87
NPC1-205ENST00000587163 SNAPC2Q13487 334 aa20.51■□□□□ 0.87
NPC1-205ENST00000587163 SLC4A8Q2Y0W8 1093 aa20.51■□□□□ 0.87
NPC1-205ENST00000587163 HHIPL2Q6UWX4 724 aa20.51■□□□□ 0.87
NPC1-205ENST00000587163 SH3TC2Q8TF17 1288 aa20.51■□□□□ 0.87
NPC1-205ENST00000587163 SUGT1Q9Y2Z0 365 aa20.51■□□□□ 0.87
NPC1-205ENST00000587163 INPP5BP32019 993 aa20.5■□□□□ 0.87
NPC1-205ENST00000587163 PPIL2Q13356 520 aa20.5■□□□□ 0.87
NPC1-205ENST00000587163 PUM3Q15397 648 aaKnown RBP20.5■□□□□ 0.87
NPC1-205ENST00000587163 ZCCHC17Q9NP64 241 aaKnown RBP20.5■□□□□ 0.87
NPC1-205ENST00000587163 WDHD1O75717 1129 aaPredicted RBP20.49■□□□□ 0.87
NPC1-205ENST00000587163 ECM2O94769 699 aaPredicted RBP20.49■□□□□ 0.87
NPC1-205ENST00000587163 IFIT1P09914 478 aaKnown RBP20.49■□□□□ 0.87
NPC1-205ENST00000587163 RFX5P48382 616 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms