RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 DPF2Q92785 391 aa15.06■□□□□ 0
DNMT1-207ENST00000586588 BICC1Q9H694 974 aaKnown RBP15.06■□□□□ 0
DNMT1-207ENST00000586588 CDC23Q9UJX2 597 aa15.06■□□□□ 0
DNMT1-207ENST00000586588 NBPF7P0C2Y1 421 aaPredicted RBP15.06■□□□□ 0
DNMT1-207ENST00000586588 HSP90B1P14625 803 aaKnown RBP15.06■□□□□ 0
DNMT1-207ENST00000586588 MICALL1Q8N3F8 863 aa15.06■□□□□ 0
DNMT1-207ENST00000586588 KCNG4Q8TDN1 519 aa15.06■□□□□ 0
DNMT1-207ENST00000586588 PNKPQ96T60 521 aa15.06■□□□□ 0
DNMT1-207ENST00000586588 VIPAS39Q9H9C1 493 aa15.06■□□□□ 0
DNMT1-207ENST00000586588 ILDR1Q86SU0 546 aaPredicted RBP15.06■□□□□ 0
DNMT1-207ENST00000586588 TACO1Q9BSH4 297 aaKnown RBP15.06■□□□□ 0
DNMT1-207ENST00000586588 FAM204AQ9H8W3 233 aa15.06■□□□□ 0
DNMT1-207ENST00000586588 BABAM1Q9NWV8 329 aa15.06■□□□□ 0
DNMT1-207ENST00000586588 SBNO1A3KN83 1393 aa15.05■□□□□ 0
DNMT1-207ENST00000586588 FOXO3O43524 673 aa15.05■□□□□ 0
DNMT1-207ENST00000586588 ERLIN2O94905 339 aa15.05■□□□□ 0
DNMT1-207ENST00000586588 LINC00301Q8NCQ3 95 aa15.05■□□□□ 0
DNMT1-207ENST00000586588 CCDC102AQ96A19 550 aa15.05■□□□□ 0
DNMT1-207ENST00000586588 TAF5LO75529 589 aa15.05■□□□□ -0
DNMT1-207ENST00000586588 WDHD1O75717 1129 aaPredicted RBP15.05■□□□□ -0
DNMT1-207ENST00000586588 LRRC37A3O60309 1634 aa15.05■□□□□ -0
DNMT1-207ENST00000586588 BIN1O00499 593 aa15.04■□□□□ -0
DNMT1-207ENST00000586588 YEATS4O95619 227 aa15.04■□□□□ -0
DNMT1-207ENST00000586588 AARSP49588 968 aaKnown RBP eCLIP15.04■□□□□ -03e-8■■□□□ 12.6
DNMT1-207ENST00000586588 TUBE1Q9UJT0 475 aa15.04■□□□□ -0
DNMT1-207ENST00000586588 OVOS2A0A0J9YW53 1432 aa15.04■□□□□ -0
DNMT1-207ENST00000586588 OVOS2Q6IE36 1432 aa15.04■□□□□ -0
DNMT1-207ENST00000586588 PTPDC1A2A3K4 754 aa15.04■□□□□ -0
DNMT1-207ENST00000586588 ZNF202O95125 648 aa15.04■□□□□ -0
DNMT1-207ENST00000586588 TOGARAM2Q6ZUX3 1019 aa15.04■□□□□ -0
DNMT1-207ENST00000586588 CTCFLQ8NI51 663 aaPredicted RBP15.04■□□□□ -0
DNMT1-207ENST00000586588 SUFUQ9UMX1 484 aa15.04■□□□□ -0
DNMT1-207ENST00000586588 ANKRD65E5RJM6 399 aa15.03■□□□□ -0
DNMT1-207ENST00000586588 CTDNEP1O95476 244 aa15.03■□□□□ -0
DNMT1-207ENST00000586588 AFAP1L1Q8TED9 768 aa15.03■□□□□ -0
DNMT1-207ENST00000586588 NECTIN2Q92692 538 aa15.03■□□□□ -0
DNMT1-207ENST00000586588 SALL1Q9NSC2 1324 aa15.03■□□□□ -0
DNMT1-207ENST00000586588 POLR3EQ9NVU0 708 aa15.03■□□□□ -0
DNMT1-207ENST00000586588 SF3A1Q15459 793 aaKnown RBP15.03■□□□□ -0
DNMT1-207ENST00000586588 AACSQ86V21 672 aa15.03■□□□□ -0
DNMT1-207ENST00000586588 TC2NQ8N9U0 490 aa15.03■□□□□ -0
DNMT1-207ENST00000586588 FSD1Q9BTV5 496 aa15.03■□□□□ -0
DNMT1-207ENST00000586588 HMGB1P09429 215 aaKnown RBP15.02■□□□□ -0
DNMT1-207ENST00000586588 HNRNPH1P31943 449 aaKnown RBP15.02■□□□□ -0
DNMT1-207ENST00000586588 GOLGA8FQ08AF8 430 aa15.02■□□□□ -0
DNMT1-207ENST00000586588 GOLGA8DPQ0D2H9 430 aa15.02■□□□□ -0
DNMT1-207ENST00000586588 TRDNQ13061 729 aa15.02■□□□□ -0
DNMT1-207ENST00000586588 BEND3Q5T5X7 828 aa15.02■□□□□ -0
DNMT1-207ENST00000586588 SUGCTQ9HAC7 445 aa15.02■□□□□ -0
DNMT1-207ENST00000586588 A1CFQ9NQ94 594 aaKnown RBP15.02■□□□□ -0
DNMT1-207ENST00000586588 TMEM232C9JQI7 657 aa15.02□□□□□ -0.01
DNMT1-207ENST00000586588 CCDC175P0C221 793 aa15.02□□□□□ -0.01
DNMT1-207ENST00000586588 STK38Q15208 465 aa15.02□□□□□ -0.01
DNMT1-207ENST00000586588 ZNF589Q86UQ0 364 aaPredicted RBP15.02□□□□□ -0.01
DNMT1-207ENST00000586588 SIL1Q9H173 461 aa15.02□□□□□ -0.01
DNMT1-207ENST00000586588 ZSWIM4Q9H7M6 989 aa15.02□□□□□ -0.01
DNMT1-207ENST00000586588 MAP3K19Q56UN5 1328 aa15.02□□□□□ -0.01
DNMT1-207ENST00000586588 KDRP35968 1356 aa15.02□□□□□ -0.01
DNMT1-207ENST00000586588 EXOC5O00471 708 aa15.01□□□□□ -0.01
DNMT1-207ENST00000586588 SHOX2O60902 331 aaPredicted RBP15.01□□□□□ -0.01
DNMT1-207ENST00000586588 RNF40O75150 1001 aa15.01□□□□□ -0.01
DNMT1-207ENST00000586588 PRPF6O94906 941 aaKnown RBP15.01□□□□□ -0.01
DNMT1-207ENST00000586588 CMA1P23946 247 aa15.01□□□□□ -0.01
DNMT1-207ENST00000586588 MNAT1P51948 309 aa15.01□□□□□ -0.01
DNMT1-207ENST00000586588 VSNL1P62760 191 aa15.01□□□□□ -0.01
DNMT1-207ENST00000586588 WDR93Q6P2C0 686 aa15.01□□□□□ -0.01
DNMT1-207ENST00000586588 KAT2BQ92831 832 aa15.01□□□□□ -0.01
DNMT1-207ENST00000586588 CARD10Q9BWT7 1032 aa15.01□□□□□ -0.01
DNMT1-207ENST00000586588 PUF60Q9UHX1 559 aaKnown RBP15.01□□□□□ -0.01
DNMT1-207ENST00000586588 U3KPZ7 1027 aaPredicted RBP15.01□□□□□ -0.01
DNMT1-207ENST00000586588 PIK3C2AO00443 1686 aa15.01□□□□□ -0.01
DNMT1-207ENST00000586588 HSP90AB2PQ58FF8 381 aa15.01□□□□□ -0.01
DNMT1-207ENST00000586588 PHAXQ9H814 394 aaKnown RBP15.01□□□□□ -0.01
DNMT1-207ENST00000586588 INTS13Q9NVM9 706 aa15.01□□□□□ -0.01
DNMT1-207ENST00000586588 PEAK1Q9H792 1746 aa15.01□□□□□ -0.01
DNMT1-207ENST00000586588 NWD1Q149M9 1564 aa15.01□□□□□ -0.01
DNMT1-207ENST00000586588 SPTLC2O15270 562 aa15.01□□□□□ -0.01
DNMT1-207ENST00000586588 POTEDQ86YR6 584 aa15.01□□□□□ -0.01
DNMT1-207ENST00000586588 ANKARQ7Z5J8 1434 aa15□□□□□ -0.01
DNMT1-207ENST00000586588 MARF1Q9Y4F3 1742 aaKnown RBP15□□□□□ -0.01
DNMT1-207ENST00000586588 KIF5CO60282 957 aa15□□□□□ -0.01
DNMT1-207ENST00000586588 PHACTR2O75167 634 aa15□□□□□ -0.01
DNMT1-207ENST00000586588 SPECC1LQ69YQ0 1117 aa15□□□□□ -0.01
DNMT1-207ENST00000586588 WWC2Q6AWC2 1192 aa15□□□□□ -0.01
DNMT1-207ENST00000586588 ARHGEF25Q86VW2 580 aa15□□□□□ -0.01
DNMT1-207ENST00000586588 LRRIQ3A6PVS8 624 aaPredicted RBP15□□□□□ -0.01
DNMT1-207ENST00000586588 SYF2O95926 243 aaKnown RBP15□□□□□ -0.01
DNMT1-207ENST00000586588 PIP4K2BP78356 416 aa15□□□□□ -0.01
DNMT1-207ENST00000586588 SATB1Q01826 763 aa15□□□□□ -0.01
DNMT1-207ENST00000586588 HDGFL1Q5TGJ6 251 aa15□□□□□ -0.01
DNMT1-207ENST00000586588 STAG1Q8WVM7 1258 aa15□□□□□ -0.01
DNMT1-207ENST00000586588 AGXT2Q9BYV1 514 aa15□□□□□ -0.01
DNMT1-207ENST00000586588 MRPL44Q9H9J2 332 aaKnown RBP15□□□□□ -0.01
DNMT1-207ENST00000586588 KARSQ15046 597 aaKnown RBP14.99□□□□□ -0.01
DNMT1-207ENST00000586588 WHAMMP3Q1A5X7 153 aa14.99□□□□□ -0.01
DNMT1-207ENST00000586588 C19orf44Q9H6X5 657 aa14.99□□□□□ -0.01
DNMT1-207ENST00000586588 NCAPD2Q15021 1401 aa14.99□□□□□ -0.01
DNMT1-207ENST00000586588 CEP120Q8N960 986 aa14.99□□□□□ -0.01
DNMT1-207ENST00000586588 EBAG9O00559 213 aa14.98□□□□□ -0.01
DNMT1-207ENST00000586588 PFKFB1P16118 471 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms