RNA–Protein interactions for RNA: ENST00000586084.1

PLEKHM1-214, Transcript of pleckstrin homology and RUN domain containing M1, human

TSL 4

Gene PLEKHM1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLEKHM1-214	ENST00000586084	RIPOR2	Q9Y4F9	1068 aa		27.62	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	UTY	O14607	1347 aa		27.62	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	TCP10L2	B9ZVM9	353 aa		27.6	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	CAVIN4	Q5BKX8	364 aa		27.6	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	TBC1D22A	Q8WUA7	517 aa		27.6	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	TEPSIN	Q96N21	525 aa		27.6	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	PTPN22	Q9Y2R2	807 aa		27.6	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	FRAT2	O75474	233 aa	Predicted RBP	27.59	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	HDLBP	Q00341	1268 aa	Known RBP	27.59	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	SP3	Q02447	781 aa		27.59	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	RABL6	Q3YEC7	729 aa	Predicted RBP	27.59	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	FBXO33	Q7Z6M2	555 aa		27.59	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	CD99L2	Q8TCZ2	262 aa		27.59	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	PTPN18	Q99952	460 aa		27.59	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	BICC1	Q9H694	974 aa	Known RBP	27.59	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	EFCC1	Q9HA90	598 aa		27.59	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	METTL24	Q5JXM2	366 aa		27.58	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	27.58	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	FAM9B	Q8IZU0	186 aa		27.58	■■■□□ 2.01
PLEKHM1-214	ENST00000586084	MYH13	Q9UKX3	1938 aa		27.57	■■■□□ 2
PLEKHM1-214	ENST00000586084	MAP3K9	P80192	1104 aa		27.57	■■■□□ 2
PLEKHM1-214	ENST00000586084	MS4A4A	Q96JQ5	239 aa		27.57	■■■□□ 2
PLEKHM1-214	ENST00000586084	TMEM39B	Q9GZU3	492 aa		27.57	■■■□□ 2
PLEKHM1-214	ENST00000586084	CSAD	Q9Y600	493 aa		27.57	■■■□□ 2
PLEKHM1-214	ENST00000586084	GTF2A2	P52657	109 aa		27.56	■■■□□ 2
PLEKHM1-214	ENST00000586084	CHAF1A	Q13111	956 aa	Predicted RBP	27.56	■■■□□ 2
PLEKHM1-214	ENST00000586084	VGLL4	Q14135	290 aa		27.56	■■■□□ 2
PLEKHM1-214	ENST00000586084	TEKT1	Q969V4	418 aa		27.56	■■■□□ 2
PLEKHM1-214	ENST00000586084	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	27.56	■■■□□ 2
PLEKHM1-214	ENST00000586084	PDE8B	O95263	885 aa		27.55	■■■□□ 2
PLEKHM1-214	ENST00000586084	ARHGEF6	Q15052	776 aa		27.55	■■■□□ 2
PLEKHM1-214	ENST00000586084	CDAN1	Q8IWY9	1227 aa		27.55	■■■□□ 2
PLEKHM1-214	ENST00000586084	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	27.55	■■■□□ 2
PLEKHM1-214	ENST00000586084	TMOD2	Q9NZR1	351 aa		27.55	■■■□□ 2
PLEKHM1-214	ENST00000586084	CCL15-CCL14	A0A0B4J2E2	113 aa		27.54	■■■□□ 2
PLEKHM1-214	ENST00000586084	CCL15	Q16663	113 aa		27.54	■■■□□ 2
PLEKHM1-214	ENST00000586084	LRRC24	Q50LG9	513 aa		27.54	■■■□□ 2
PLEKHM1-214	ENST00000586084	MAST3	O60307	1309 aa		27.53	■■■□□ 2
PLEKHM1-214	ENST00000586084	PTPRC	P08575	1304 aa		27.53	■■■□□ 2
PLEKHM1-214	ENST00000586084	TAF1C	Q15572	869 aa	Predicted RBP	27.53	■■■□□ 2
PLEKHM1-214	ENST00000586084	GRIK5	Q16478	980 aa		27.53	■■■□□ 2
PLEKHM1-214	ENST00000586084	ANKRD44	Q8N8A2	993 aa		27.53	■■■□□ 2
PLEKHM1-214	ENST00000586084	ARMC5	Q96C12	935 aa		27.53	■■■□□ 2
PLEKHM1-214	ENST00000586084	GCC1	Q96CN9	775 aa		27.53	■■■□□ 2
PLEKHM1-214	ENST00000586084	MRI	Q9BWK5	157 aa		27.53	■■■□□ 2
PLEKHM1-214	ENST00000586084	ZFYVE28	Q9HCC9	887 aa		27.53	■■■□□ 2
PLEKHM1-214	ENST00000586084	POTEF	A5A3E0	1075 aa		27.52	■■■□□ 2
PLEKHM1-214	ENST00000586084	WDHD1	O75717	1129 aa	Predicted RBP	27.52	■■■□□ 2
PLEKHM1-214	ENST00000586084	VGLL2	Q8N8G2	317 aa		27.52	■■■□□ 2
PLEKHM1-214	ENST00000586084	CNKSR2	Q8WXI2	1034 aa		27.52	■■■□□ 2
PLEKHM1-214	ENST00000586084	BRI3BP	Q8WY22	251 aa		27.52	■■■□□ 2
PLEKHM1-214	ENST00000586084	HOOK2	Q96ED9	719 aa		27.52	■■■□□ 2
PLEKHM1-214	ENST00000586084	OTUD5	Q96G74	571 aa		27.52	■■■□□ 2
PLEKHM1-214	ENST00000586084	SUGT1	Q9Y2Z0	365 aa		27.52	■■■□□ 2
PLEKHM1-214	ENST00000586084	MRPL50	Q8N5N7	158 aa	Known RBP	27.51	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	ZDHHC15	Q96MV8	337 aa		27.51	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	KIF16B	Q96L93	1317 aa		27.5	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	FAM83A	Q86UY5	434 aa		27.5	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	KIAA0100	Q14667	2235 aa	Known RBP	27.49	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	ZNF521	Q96K83	1311 aa		27.49	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	ZNF316	A6NFI3	1004 aa	Predicted RBP	27.49	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	SPDYE5	A6NIY4	337 aa		27.49	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	IFIT1	P09914	478 aa	Known RBP	27.49	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	BCAM	P50895	628 aa		27.49	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	PUM3	Q15397	648 aa	Known RBP	27.49	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	FKBP1C	Q5VVH2	108 aa		27.49	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	CACNB3	P54284	484 aa		27.48	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	ERO1B	Q86YB8	467 aa		27.48	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	HTT	P42858	3142 aa		27.47	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	CETP	P11597	493 aa		27.47	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	ZEB1	P37275	1124 aa	Predicted RBP	27.47	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	HHIPL2	Q6UWX4	724 aa		27.47	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	NBPF11	Q86T75	865 aa		27.47	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	FAM43A	Q8N2R8	423 aa		27.47	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	WRNIP1	Q96S55	665 aa		27.47	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	TMEM106C	Q9BVX2	250 aa		27.47	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	ZCCHC17	Q9NP64	241 aa	Known RBP	27.47	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	SNCAIP	Q9Y6H5	919 aa		27.47	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	AK9	Q5TCS8	1911 aa		27.46	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	DCAF15	Q66K64	600 aa		27.46	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	KLHDC4	Q8TBB5	520 aa		27.46	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	USP44	Q9H0E7	712 aa		27.46	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	RPAP1	Q9BWH6	1393 aa	Predicted RBP	27.46	■■□□□ 1.99
PLEKHM1-214	ENST00000586084	CAP1	Q01518	475 aa		27.45	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	APOBEC3H	Q6NTF7	200 aa	Known RBP	27.45	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	FGFR2	P21802	821 aa		27.44	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	SNAPC2	Q13487	334 aa		27.44	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	KIF22	Q14807	665 aa		27.44	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	SLC9C1	Q4G0N8	1177 aa		27.44	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	WDR66	Q8TBY9	1149 aa		27.44	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	SLC5A1	P13866	664 aa		27.43	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	ZNF333	Q96JL9	665 aa		27.43	■■□□□ 1.98
PLEKHM1-214	ENST00000586084		E9PSI1	815 aa		27.42	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	EYA2	O00167	538 aa		27.42	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	TLR2	O60603	784 aa		27.42	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	EN2	P19622	333 aa	Predicted RBP	27.42	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	PPIL2	Q13356	520 aa		27.42	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	SSH1	Q8WYL5	1049 aa		27.42	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	LPIN2	Q92539	896 aa		27.42	■■□□□ 1.98
PLEKHM1-214	ENST00000586084	ZKSCAN4	Q969J2	545 aa	Predicted RBP	27.42	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms