RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 FAM196AQ6ZSG2 479 aa14.5□□□□□ -0.09
SMARCA4-208ENST00000585799 LEO1Q8WVC0 666 aaPredicted RBP14.5□□□□□ -0.09
SMARCA4-208ENST00000585799 ADD2P35612 726 aa14.5□□□□□ -0.09
SMARCA4-208ENST00000585799 SSRP1Q08945 709 aaKnown RBP14.5□□□□□ -0.09
SMARCA4-208ENST00000585799 ZSCAN16Q9H4T2 348 aaPredicted RBP14.5□□□□□ -0.09
SMARCA4-208ENST00000585799 AATFQ9NY61 560 aaKnown RBP eCLIP14.5□□□□□ -0.09
SMARCA4-208ENST00000585799 PTF1AQ7RTS3 328 aa14.5□□□□□ -0.09
SMARCA4-208ENST00000585799 MKNK2Q9HBH9 465 aa14.5□□□□□ -0.09
SMARCA4-208ENST00000585799 SLC3A2P08195 630 aaKnown RBP14.49□□□□□ -0.09
SMARCA4-208ENST00000585799 CNBD1Q8NA66 436 aa14.49□□□□□ -0.09
SMARCA4-208ENST00000585799 GPR101Q96P66 508 aaPredicted RBP14.49□□□□□ -0.09
SMARCA4-208ENST00000585799 FBXO3Q9UK99 471 aa14.49□□□□□ -0.09
SMARCA4-208ENST00000585799 ANGEL1Q9UNK9 670 aaKnown RBP14.49□□□□□ -0.09
SMARCA4-208ENST00000585799 RIMBP2O15034 1052 aa14.49□□□□□ -0.09
SMARCA4-208ENST00000585799 ZSCAN30Q86W11 494 aa14.49□□□□□ -0.09
SMARCA4-208ENST00000585799 IQCA1Q86XH1 822 aa14.49□□□□□ -0.09
SMARCA4-208ENST00000585799 IFNL3Q8IZI9 196 aa14.49□□□□□ -0.09
SMARCA4-208ENST00000585799 NYXQ9GZU5 481 aa14.49□□□□□ -0.09
SMARCA4-208ENST00000585799 CSF1RP07333 972 aa14.49□□□□□ -0.09
SMARCA4-208ENST00000585799 PDILTQ8N807 584 aa14.49□□□□□ -0.09
SMARCA4-208ENST00000585799 CELF1Q92879 486 aaKnown RBP14.49□□□□□ -0.09
SMARCA4-208ENST00000585799 RNF41Q9H4P4 317 aaPredicted RBP14.49□□□□□ -0.09
SMARCA4-208ENST00000585799 TSPY2A6NKD2 308 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 HIBADHP31937 336 aaKnown RBP14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 TBC1D9BQ66K14 1250 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 KLHL34Q8N239 644 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 DNAJC25Q9H1X3 360 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 DENND2AQ9ULE3 1009 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 KIF1AQ12756 1690 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 CYP2D7A0A087X1C5 515 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 A0A1B0GVL5 298 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 PFKFB2O60825 505 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 XBP1P17861 261 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 ANO6Q4KMQ2 910 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 NSUN7Q8NE18 718 aaKnown RBP14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 AIFM3Q96NN9 605 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 A0A087WWV3 80 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 PDIA4P13667 645 aaKnown RBP14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 DYNLL1P63167 89 aaKnown RBP14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 RTN1Q16799 776 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 INTS5Q6P9B9 1019 aaKnown RBP14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 FILIP1Q7Z7B0 1213 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 LCORLQ8N3X6 602 aa14.48□□□□□ -0.09
SMARCA4-208ENST00000585799 MED23Q9ULK4 1368 aa14.47□□□□□ -0.09
SMARCA4-208ENST00000585799 ZNF165P49910 485 aa14.47□□□□□ -0.09
SMARCA4-208ENST00000585799 TPM4P67936 248 aa14.47□□□□□ -0.09
SMARCA4-208ENST00000585799 ZNF34Q8IZ26 560 aa14.47□□□□□ -0.09
SMARCA4-208ENST00000585799 DDX19AQ9NUU7 478 aaKnown RBP14.47□□□□□ -0.09
SMARCA4-208ENST00000585799 MCM9Q9NXL9 1143 aa14.47□□□□□ -0.09
SMARCA4-208ENST00000585799 USP28Q96RU2 1077 aa14.47□□□□□ -0.09
SMARCA4-208ENST00000585799 THRAP3Q9Y2W1 955 aaKnown RBP14.47□□□□□ -0.09
SMARCA4-208ENST00000585799 CAMTA2O94983 1202 aa14.47□□□□□ -0.09
SMARCA4-208ENST00000585799 RBM5P52756 815 aaKnown RBP eCLIP14.47□□□□□ -0.09
SMARCA4-208ENST00000585799 LUZP1Q86V48 1076 aa14.47□□□□□ -0.09
SMARCA4-208ENST00000585799 LINC00116Q8NCU8 138 aa14.47□□□□□ -0.09
SMARCA4-208ENST00000585799 ZNF592Q92610 1267 aa14.47□□□□□ -0.09
SMARCA4-208ENST00000585799 SMC2O95347 1197 aa14.46□□□□□ -0.09
SMARCA4-208ENST00000585799 KRT23Q9C075 422 aa14.46□□□□□ -0.09
SMARCA4-208ENST00000585799 STX8Q9UNK0 236 aa14.46□□□□□ -0.09
SMARCA4-208ENST00000585799 RGPD5Q99666 1765 aa14.46□□□□□ -0.09
SMARCA4-208ENST00000585799 WTIPA6NIX2 430 aaPredicted RBP14.46□□□□□ -0.09
SMARCA4-208ENST00000585799 TYRO3Q06418 890 aa14.46□□□□□ -0.09
SMARCA4-208ENST00000585799 ESR2Q92731 530 aa14.46□□□□□ -0.09
SMARCA4-208ENST00000585799 TTC12Q9H892 705 aaPredicted RBP14.46□□□□□ -0.09
SMARCA4-208ENST00000585799 CDHR2Q9BYE9 1310 aa14.46□□□□□ -0.09
SMARCA4-208ENST00000585799 COL15A1P39059 1388 aa14.46□□□□□ -0.09
SMARCA4-208ENST00000585799 PATL2C9JE40 543 aaKnown RBP14.46□□□□□ -0.1
SMARCA4-208ENST00000585799 TRIM37O94972 964 aa14.46□□□□□ -0.1
SMARCA4-208ENST00000585799 CRNKL1Q9BZJ0 848 aaKnown RBP14.46□□□□□ -0.1
SMARCA4-208ENST00000585799 JMYQ8N9B5 988 aa14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 ZNF622Q969S3 477 aaKnown RBP eCLIP14.45□□□□□ -0.15e-11■■□□□ 13.2
SMARCA4-208ENST00000585799 ANO8Q9HCE9 1232 aaPredicted RBP14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 RPAP1Q9BWH6 1393 aaPredicted RBP14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 PES1O00541 588 aaKnown RBP14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 PRKCSHP14314 528 aaPredicted RBP14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 UBE3CQ15386 1083 aa14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 IFIT1BQ5T764 474 aaKnown RBP14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 CATIPQ7Z7H3 387 aa14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 TBC1D10CQ8IV04 446 aa14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 SAP30BPQ9UHR5 308 aaKnown RBP14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 KCNJ14Q9UNX9 436 aa14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 SPATA31A5Q5VU36 1347 aa14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 SPATA31A7Q8IWB4 1347 aa14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 USP17L12C9JPN9 530 aa14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 USP17L21D6R901 530 aa14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 NR1I2O75469 434 aa14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 FAM47AQ5JRC9 791 aa14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 CTCFLQ8NI51 663 aaPredicted RBP14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 VAT1LQ9HCJ6 419 aa14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 BRMS1Q9HCU9 246 aa14.45□□□□□ -0.1
SMARCA4-208ENST00000585799 AKNAD1Q5T1N1 836 aa14.44□□□□□ -0.1
SMARCA4-208ENST00000585799 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.44□□□□□ -0.1
SMARCA4-208ENST00000585799 MARCH6O60337 910 aa14.44□□□□□ -0.1
SMARCA4-208ENST00000585799 UFL1O94874 794 aa14.44□□□□□ -0.1
SMARCA4-208ENST00000585799 CDK11BP21127 795 aaKnown RBP14.44□□□□□ -0.1
SMARCA4-208ENST00000585799 SPECC1Q5M775 1068 aa14.44□□□□□ -0.1
SMARCA4-208ENST00000585799 SEPT12Q8IYM1 358 aa14.44□□□□□ -0.1
SMARCA4-208ENST00000585799 CNNM2Q9H8M5 875 aa14.44□□□□□ -0.1
SMARCA4-208ENST00000585799 QTRT2Q9H974 415 aaKnown RBP14.44□□□□□ -0.1
SMARCA4-208ENST00000585799 PPP1R1BQ9UD71 204 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms