RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 NF2P35240 595 aa16.93■□□□□ 0.3
PRKCSH-202ENST00000585540 NBPF9Q3BBW0 867 aa16.93■□□□□ 0.3
PRKCSH-202ENST00000585540 ZDHHC15Q96MV8 337 aa16.93■□□□□ 0.3
PRKCSH-202ENST00000585540 RASSF10A6NK89 507 aa16.92■□□□□ 0.3
PRKCSH-202ENST00000585540 RBM5P52756 815 aaKnown RBP eCLIP16.92■□□□□ 0.39e-8■■□□□ 11.4
PRKCSH-202ENST00000585540 IRX6P78412 446 aaPredicted RBP16.92■□□□□ 0.3
PRKCSH-202ENST00000585540 SPDYE2Q495Y8 402 aa16.92■□□□□ 0.3
PRKCSH-202ENST00000585540 FKBP1CQ5VVH2 108 aa16.92■□□□□ 0.3
PRKCSH-202ENST00000585540 USP48Q86UV5 1035 aa16.92■□□□□ 0.3
PRKCSH-202ENST00000585540 SPATA5Q8NB90 893 aa16.92■□□□□ 0.3
PRKCSH-202ENST00000585540 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.92■□□□□ 0.3
PRKCSH-202ENST00000585540 TMOD2Q9NZR1 351 aa16.92■□□□□ 0.3
PRKCSH-202ENST00000585540 JAG2Q9Y219 1238 aa16.92■□□□□ 0.3
PRKCSH-202ENST00000585540 POLR2AP24928 1970 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-202ENST00000585540 CNTNAP1P78357 1384 aa16.91■□□□□ 0.3
PRKCSH-202ENST00000585540 CELF2O95319 508 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-202ENST00000585540 MAP4K4O95819 1239 aaPredicted RBP16.91■□□□□ 0.3
PRKCSH-202ENST00000585540 TNNI2P48788 182 aa16.91■□□□□ 0.3
PRKCSH-202ENST00000585540 EAF2Q96CJ1 260 aaPredicted RBP16.91■□□□□ 0.3
PRKCSH-202ENST00000585540 KLRG1Q96E93 195 aa16.91■□□□□ 0.3
PRKCSH-202ENST00000585540 DBNDD2Q9BQY9 259 aa16.91■□□□□ 0.3
PRKCSH-202ENST00000585540 LRRCC1Q9C099 1032 aa16.91■□□□□ 0.3
PRKCSH-202ENST00000585540 DBNLQ9UJU6 430 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-202ENST00000585540 TLL2Q9Y6L7 1015 aa16.91■□□□□ 0.3
PRKCSH-202ENST00000585540 MAST2Q6P0Q8 1798 aa16.91■□□□□ 0.3
PRKCSH-202ENST00000585540 PAPPA2Q9BXP8 1791 aa16.91■□□□□ 0.3
PRKCSH-202ENST00000585540 GSTO1P78417 241 aa16.9■□□□□ 0.3
PRKCSH-202ENST00000585540 ERICH6Q7L0X2 663 aa16.9■□□□□ 0.3
PRKCSH-202ENST00000585540 AACSQ86V21 672 aa16.9■□□□□ 0.3
PRKCSH-202ENST00000585540 EXOC6Q8TAG9 804 aa16.9■□□□□ 0.3
PRKCSH-202ENST00000585540 CDCA5Q96FF9 252 aa16.9■□□□□ 0.3
PRKCSH-202ENST00000585540 FAM163AQ96GL9 167 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-202ENST00000585540 DCTPP1Q9H773 170 aa16.9■□□□□ 0.3
PRKCSH-202ENST00000585540 HMG20BQ9P0W2 317 aa16.9■□□□□ 0.3
PRKCSH-202ENST00000585540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-202ENST00000585540 RPAP1Q9BWH6 1393 aaPredicted RBP16.89■□□□□ 0.3
PRKCSH-202ENST00000585540 UNCXA6NJT0 531 aa16.89■□□□□ 0.29
PRKCSH-202ENST00000585540 LDHCP07864 332 aa16.89■□□□□ 0.29
PRKCSH-202ENST00000585540 IFIT2P09913 472 aaKnown RBP16.89■□□□□ 0.29
PRKCSH-202ENST00000585540 PRDX5P30044 214 aa16.89■□□□□ 0.29
PRKCSH-202ENST00000585540 ECE1P42892 770 aa16.89■□□□□ 0.29
PRKCSH-202ENST00000585540 MCAMP43121 646 aa16.89■□□□□ 0.29
PRKCSH-202ENST00000585540 DZIP1Q86YF9 867 aaKnown RBP16.89■□□□□ 0.29
PRKCSH-202ENST00000585540 C2orf69Q8N8R5 385 aa16.89■□□□□ 0.29
PRKCSH-202ENST00000585540 HOOK2Q96ED9 719 aa16.89■□□□□ 0.29
PRKCSH-202ENST00000585540 PRMT6Q96LA8 375 aaPredicted RBP16.89■□□□□ 0.29
PRKCSH-202ENST00000585540 GBA2Q9HCG7 927 aaPredicted RBP16.89■□□□□ 0.29
PRKCSH-202ENST00000585540 GAKO14976 1311 aa16.89■□□□□ 0.29
PRKCSH-202ENST00000585540 ADM5C9JUS6 153 aa16.88■□□□□ 0.29
PRKCSH-202ENST00000585540 TRAF5O00463 557 aa16.88■□□□□ 0.29
PRKCSH-202ENST00000585540 HDAC1Q13547 482 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-202ENST00000585540 CERS3Q8IU89 383 aa16.88■□□□□ 0.29
PRKCSH-202ENST00000585540 GCC1Q96CN9 775 aa16.88■□□□□ 0.29
PRKCSH-202ENST00000585540 ZNF70Q9UC06 446 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-202ENST00000585540 ABCF2Q9UG63 623 aa16.88■□□□□ 0.29
PRKCSH-202ENST00000585540 ABT1Q9ULW3 272 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-202ENST00000585540 ASTN2O75129 1339 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-202ENST00000585540 AKAP11Q9UKA4 1901 aa16.88■□□□□ 0.29
PRKCSH-202ENST00000585540 TTF1Q15361 905 aaPredicted RBP16.87■□□□□ 0.29
PRKCSH-202ENST00000585540 SUPT20HL1Q3ZLR7 823 aa16.87■□□□□ 0.29
PRKCSH-202ENST00000585540 CST9Q5W186 159 aa16.87■□□□□ 0.29
PRKCSH-202ENST00000585540 SAPCD2Q86UD0 394 aa16.87■□□□□ 0.29
PRKCSH-202ENST00000585540 FAM83AQ86UY5 434 aa16.87■□□□□ 0.29
PRKCSH-202ENST00000585540 DNAJC5GQ8N7S2 189 aa16.87■□□□□ 0.29
PRKCSH-202ENST00000585540 DEFB129Q9H1M3 183 aa16.87■□□□□ 0.29
PRKCSH-202ENST00000585540 IL1RAPL2Q9NP60 686 aa16.87■□□□□ 0.29
PRKCSH-202ENST00000585540 PCDHB15Q9Y5E8 787 aa16.87■□□□□ 0.29
PRKCSH-202ENST00000585540 CENPBP07199 599 aaPredicted RBP16.86■□□□□ 0.29
PRKCSH-202ENST00000585540 DEFB115Q30KQ5 88 aa16.86■□□□□ 0.29
PRKCSH-202ENST00000585540 IFFO2Q5TF58 517 aa16.86■□□□□ 0.29
PRKCSH-202ENST00000585540 JMYQ8N9B5 988 aa16.86■□□□□ 0.29
PRKCSH-202ENST00000585540 GPATCH3Q96I76 525 aa16.86■□□□□ 0.29
PRKCSH-202ENST00000585540 CCDC8Q9H0W5 538 aaPredicted RBP16.86■□□□□ 0.29
PRKCSH-202ENST00000585540 VEZTQ9HBM0 779 aa16.86■□□□□ 0.29
PRKCSH-202ENST00000585540 ZBTB47Q9UFB7 747 aaPredicted RBP16.86■□□□□ 0.29
PRKCSH-202ENST00000585540 DAGLAQ9Y4D2 1042 aa16.86■□□□□ 0.29
PRKCSH-202ENST00000585540 MROH7-TTC4A0A0A0MT08 1334 aa16.86■□□□□ 0.29
PRKCSH-202ENST00000585540 MYH2Q9UKX2 1941 aa16.86■□□□□ 0.29
PRKCSH-202ENST00000585540 THSD7BQ9C0I4 1608 aa16.85■□□□□ 0.29
PRKCSH-202ENST00000585540 GRIK5Q16478 980 aa16.85■□□□□ 0.29
PRKCSH-202ENST00000585540 APOBEC3HQ6NTF7 200 aaKnown RBP16.85■□□□□ 0.29
PRKCSH-202ENST00000585540 ARMC9Q7Z3E5 817 aa16.85■□□□□ 0.29
PRKCSH-202ENST00000585540 TDRD3Q9H7E2 651 aaKnown RBP16.85■□□□□ 0.29
PRKCSH-202ENST00000585540 ZNF408Q9H9D4 720 aa16.85■□□□□ 0.29
PRKCSH-202ENST00000585540 LRP2BPQ9P2M1 347 aa16.85■□□□□ 0.29
PRKCSH-202ENST00000585540 CLRN2A0PK11 232 aa16.84■□□□□ 0.29
PRKCSH-202ENST00000585540 PPP1R12BO60237 982 aaPredicted RBP16.84■□□□□ 0.29
PRKCSH-202ENST00000585540 NPM3O75607 178 aaKnown RBP16.84■□□□□ 0.29
PRKCSH-202ENST00000585540 TLR7Q9NYK1 1049 aaKnown RBP16.84■□□□□ 0.29
PRKCSH-202ENST00000585540 DOCK2Q92608 1830 aa16.84■□□□□ 0.29
PRKCSH-202ENST00000585540 PLCG2P16885 1265 aa16.83■□□□□ 0.28
PRKCSH-202ENST00000585540 HUNKP57058 714 aa16.83■□□□□ 0.28
PRKCSH-202ENST00000585540 RASA3Q14644 834 aa16.83■□□□□ 0.28
PRKCSH-202ENST00000585540 MAP3K11Q16584 847 aa16.83■□□□□ 0.28
PRKCSH-202ENST00000585540 NSUN4Q96CB9 384 aaKnown RBP16.83■□□□□ 0.28
PRKCSH-202ENST00000585540 NOL10Q9BSC4 688 aaKnown RBP16.83■□□□□ 0.28
PRKCSH-202ENST00000585540 RWDD1Q9H446 243 aaPredicted RBP16.83■□□□□ 0.28
PRKCSH-202ENST00000585540 RAI14Q9P0K7 980 aa16.83■□□□□ 0.28
PRKCSH-202ENST00000585540 GPR75-ASB3A0A0A6YYF3 556 aa16.82■□□□□ 0.28
PRKCSH-202ENST00000585540 BAG3O95817 575 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms