RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 ASTN2O75129 1339 aaPredicted RBP28.5■■■□□ 2.15
LSM7-202ENST00000585395 SASH1O94885 1247 aa28.5■■■□□ 2.15
LSM7-202ENST00000585395 ATG9AQ7Z3C6 839 aa28.5■■■□□ 2.15
LSM7-202ENST00000585395 TDRD7Q8NHU6 1098 aaKnown RBP28.5■■■□□ 2.15
LSM7-202ENST00000585395 IQSEC3Q9UPP2 1182 aaPredicted RBP28.5■■■□□ 2.15
LSM7-202ENST00000585395 SURF6O75683 361 aaKnown RBP28.49■■■□□ 2.15
LSM7-202ENST00000585395 CHAF1AQ13111 956 aaPredicted RBP28.49■■■□□ 2.15
LSM7-202ENST00000585395 LPIN2Q92539 896 aa28.49■■■□□ 2.15
LSM7-202ENST00000585395 AKAP2Q9Y2D5 859 aa28.49■■■□□ 2.15
LSM7-202ENST00000585395 FKBP1AP62942 108 aaKnown RBP28.48■■■□□ 2.15
LSM7-202ENST00000585395 PKN2Q16513 984 aaKnown RBP28.48■■■□□ 2.15
LSM7-202ENST00000585395 MFSD14BQ5SR56 506 aa28.48■■■□□ 2.15
LSM7-202ENST00000585395 RBM5P52756 815 aaKnown RBP eCLIP28.47■■■□□ 2.15
LSM7-202ENST00000585395 DLGAP5Q15398 846 aa28.47■■■□□ 2.15
LSM7-202ENST00000585395 ATP2B3Q16720 1220 aa28.47■■■□□ 2.15
LSM7-202ENST00000585395 NBPF9Q3BBW0 867 aa28.47■■■□□ 2.15
LSM7-202ENST00000585395 FBXO33Q7Z6M2 555 aa28.47■■■□□ 2.15
LSM7-202ENST00000585395 ERC1Q8IUD2 1116 aa28.47■■■□□ 2.15
LSM7-202ENST00000585395 CERS5Q8N5B7 392 aa28.47■■■□□ 2.15
LSM7-202ENST00000585395 NOP58Q9Y2X3 529 aaKnown RBP28.47■■■□□ 2.15
LSM7-202ENST00000585395 FAM205AQ6ZU69 1335 aa28.46■■■□□ 2.15
LSM7-202ENST00000585395 PITPNM2Q9BZ72 1349 aa28.46■■■□□ 2.15
LSM7-202ENST00000585395 MYH13Q9UKX3 1938 aa28.46■■■□□ 2.15
LSM7-202ENST00000585395 WNT10BO00744 389 aa28.46■■■□□ 2.15
LSM7-202ENST00000585395 BCAMP50895 628 aa28.46■■■□□ 2.15
LSM7-202ENST00000585395 HPS5Q9UPZ3 1129 aa28.46■■■□□ 2.15
LSM7-202ENST00000585395 MYO1BO43795 1136 aa28.44■■■□□ 2.14
LSM7-202ENST00000585395 FGFR2P21802 821 aa28.44■■■□□ 2.14
LSM7-202ENST00000585395 ARAP2Q8WZ64 1704 aa28.43■■■□□ 2.14
LSM7-202ENST00000585395 TBC1D22AQ8WUA7 517 aa28.43■■■□□ 2.14
LSM7-202ENST00000585395 CDCA5Q96FF9 252 aa28.43■■■□□ 2.14
LSM7-202ENST00000585395 GNL3LQ9NVN8 582 aaKnown RBP28.43■■■□□ 2.14
LSM7-202ENST00000585395 TTF2Q9UNY4 1162 aaKnown RBP28.43■■■□□ 2.14
LSM7-202ENST00000585395 FKBP1BP68106 108 aa28.42■■■□□ 2.14
LSM7-202ENST00000585395 CFAP100Q494V2 611 aa28.42■■■□□ 2.14
LSM7-202ENST00000585395 RASAL3Q86YV0 1011 aa28.42■■■□□ 2.14
LSM7-202ENST00000585395 APOBEC3FQ8IUX4 373 aaKnown RBP28.42■■■□□ 2.14
LSM7-202ENST00000585395 TFCP2Q12800 502 aa28.41■■■□□ 2.14
LSM7-202ENST00000585395 SCAF8Q9UPN6 1271 aaKnown RBP28.41■■■□□ 2.14
LSM7-202ENST00000585395 RAB11FIP3O75154 756 aa28.4■■■□□ 2.14
LSM7-202ENST00000585395 GPR108Q9NPR9 543 aa28.4■■■□□ 2.14
LSM7-202ENST00000585395 NF2P35240 595 aa28.39■■■□□ 2.14
LSM7-202ENST00000585395 ECM29Q5VYK3 1845 aa28.39■■■□□ 2.13
LSM7-202ENST00000585395 SIRT2Q8IXJ6 389 aa28.38■■■□□ 2.13
LSM7-202ENST00000585395 EXOC6BQ9Y2D4 811 aa28.38■■■□□ 2.13
LSM7-202ENST00000585395 TTLL12Q14166 644 aaPredicted RBP28.37■■■□□ 2.13
LSM7-202ENST00000585395 MTMR14Q8NCE2 650 aa28.37■■■□□ 2.13
LSM7-202ENST00000585395 GCC1Q96CN9 775 aa28.37■■■□□ 2.13
LSM7-202ENST00000585395 VEZTQ9HBM0 779 aa28.37■■■□□ 2.13
LSM7-202ENST00000585395 PAPPA2Q9BXP8 1791 aa28.37■■■□□ 2.13
LSM7-202ENST00000585395 A0A1B0GUL7 405 aa28.36■■■□□ 2.13
LSM7-202ENST00000585395 KIF1BPQ96EK5 621 aa28.36■■■□□ 2.13
LSM7-202ENST00000585395 CLRN2A0PK11 232 aa28.35■■■□□ 2.13
LSM7-202ENST00000585395 SPDYE2BA6NHP3 402 aa28.35■■■□□ 2.13
LSM7-202ENST00000585395 SPDYE6P0CI01 402 aa28.35■■■□□ 2.13
LSM7-202ENST00000585395 GORABQ5T7V8 394 aa28.35■■■□□ 2.13
LSM7-202ENST00000585395 EXOC6Q8TAG9 804 aa28.35■■■□□ 2.13
LSM7-202ENST00000585395 WDR66Q8TBY9 1149 aa28.35■■■□□ 2.13
LSM7-202ENST00000585395 ZNF296Q8WUU4 475 aaPredicted RBP28.35■■■□□ 2.13
LSM7-202ENST00000585395 NEUROD6Q96NK8 337 aa28.35■■■□□ 2.13
LSM7-202ENST00000585395 SERPINA10Q9UK55 444 aa28.35■■■□□ 2.13
LSM7-202ENST00000585395 MAST3O60307 1309 aa28.35■■■□□ 2.13
LSM7-202ENST00000585395 NOM1Q5C9Z4 860 aaKnown RBP28.34■■■□□ 2.13
LSM7-202ENST00000585395 PRAMEF18Q5VWM3 479 aa28.34■■■□□ 2.13
LSM7-202ENST00000585395 ZBED3Q96IU2 234 aaPredicted RBP28.34■■■□□ 2.13
LSM7-202ENST00000585395 PCDHAC2Q9Y5I4 1007 aa28.34■■■□□ 2.13
LSM7-202ENST00000585395 CRKP46108 304 aa28.33■■■□□ 2.13
LSM7-202ENST00000585395 PCDHB15Q9Y5E8 787 aa28.33■■■□□ 2.13
LSM7-202ENST00000585395 ADORA1P30542 326 aa28.32■■■□□ 2.12
LSM7-202ENST00000585395 PHKA1P46020 1223 aa28.32■■■□□ 2.12
LSM7-202ENST00000585395 TIMM10P62072 90 aa28.32■■■□□ 2.12
LSM7-202ENST00000585395 TNNI3KQ59H18 835 aa28.32■■■□□ 2.12
LSM7-202ENST00000585395 CLASRPQ8N2M8 674 aaKnown RBP28.32■■■□□ 2.12
LSM7-202ENST00000585395 PRMT6Q96LA8 375 aaPredicted RBP28.32■■■□□ 2.12
LSM7-202ENST00000585395 DENND2AQ9ULE3 1009 aa28.32■■■□□ 2.12
LSM7-202ENST00000585395 FPGT-TNNI3KV9GXZ4 949 aa28.32■■■□□ 2.12
LSM7-202ENST00000585395 SEMA3EO15041 775 aa28.31■■■□□ 2.12
LSM7-202ENST00000585395 TBC1D8O95759 1140 aa28.31■■■□□ 2.12
LSM7-202ENST00000585395 FBXO46Q6PJ61 603 aaPredicted RBP28.31■■■□□ 2.12
LSM7-202ENST00000585395 RHPN1Q8TCX5 695 aa28.31■■■□□ 2.12
LSM7-202ENST00000585395 TEKT1Q969V4 418 aa28.31■■■□□ 2.12
LSM7-202ENST00000585395 SUGT1Q9Y2Z0 365 aa28.31■■■□□ 2.12
LSM7-202ENST00000585395 COL1A1P02452 1464 aaPredicted RBP28.3■■■□□ 2.12
LSM7-202ENST00000585395 CCDC102BQ68D86 513 aa28.3■■■□□ 2.12
LSM7-202ENST00000585395 XAGE2Q96GT9 111 aa28.3■■■□□ 2.12
LSM7-202ENST00000585395 RWDD1Q9H446 243 aaPredicted RBP28.3■■■□□ 2.12
LSM7-202ENST00000585395 DCTPP1Q9H773 170 aa28.3■■■□□ 2.12
LSM7-202ENST00000585395 ZBTB47Q9UFB7 747 aaPredicted RBP28.3■■■□□ 2.12
LSM7-202ENST00000585395 NEFLP07196 543 aa28.29■■■□□ 2.12
LSM7-202ENST00000585395 HDAC1Q13547 482 aaPredicted RBP28.29■■■□□ 2.12
LSM7-202ENST00000585395 TNFAIP1Q13829 316 aa28.29■■■□□ 2.12
LSM7-202ENST00000585395 LRRCC1Q9C099 1032 aa28.29■■■□□ 2.12
LSM7-202ENST00000585395 DEFB129Q9H1M3 183 aa28.29■■■□□ 2.12
LSM7-202ENST00000585395 APBB1O00213 710 aa28.28■■■□□ 2.12
LSM7-202ENST00000585395 ZBTB22O15209 634 aa28.28■■■□□ 2.12
LSM7-202ENST00000585395 TM4SF4P48230 202 aa28.28■■■□□ 2.12
LSM7-202ENST00000585395 IRX6P78412 446 aaPredicted RBP28.28■■■□□ 2.12
LSM7-202ENST00000585395 HDLBPQ00341 1268 aaKnown RBP28.28■■■□□ 2.12
LSM7-202ENST00000585395 GRIK5Q16478 980 aa28.28■■■□□ 2.12
LSM7-202ENST00000585395 CCDC158Q5M9N0 1113 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 285 ms