RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 SLC5A1P13866 664 aa16.71■□□□□ 0.27
PRKCSH-201ENST00000585325 FGFR2P21802 821 aa16.71■□□□□ 0.27
PRKCSH-201ENST00000585325 RARSP54136 660 aaKnown RBP16.71■□□□□ 0.27
PRKCSH-201ENST00000585325 SREBF2Q12772 1141 aa16.71■□□□□ 0.27
PRKCSH-201ENST00000585325 TNFAIP1Q13829 316 aa16.71■□□□□ 0.27
PRKCSH-201ENST00000585325 GRIK5Q16478 980 aa16.71■□□□□ 0.27
PRKCSH-201ENST00000585325 SPDYE2Q495Y8 402 aa16.71■□□□□ 0.27
PRKCSH-201ENST00000585325 NBPF12Q5TAG4 269 aaPredicted RBP16.71■□□□□ 0.27
PRKCSH-201ENST00000585325 DZIP1LQ8IYY4 767 aaKnown RBP16.71■□□□□ 0.27
PRKCSH-201ENST00000585325 SIL1Q9H173 461 aa16.71■□□□□ 0.27
PRKCSH-201ENST00000585325 HDAC5Q9UQL6 1122 aa16.71■□□□□ 0.27
PRKCSH-201ENST00000585325 KIF16BQ96L93 1317 aa16.7■□□□□ 0.26
PRKCSH-201ENST00000585325 TM4SF4P48230 202 aa16.7■□□□□ 0.26
PRKCSH-201ENST00000585325 MAP3K11Q16584 847 aa16.7■□□□□ 0.26
PRKCSH-201ENST00000585325 HABP4Q5JVS0 413 aaKnown RBP16.7■□□□□ 0.26
PRKCSH-201ENST00000585325 SPRYD7Q5W111 196 aa16.7■□□□□ 0.26
PRKCSH-201ENST00000585325 SLC10A4Q96EP9 437 aa16.7■□□□□ 0.26
PRKCSH-201ENST00000585325 LRRFIP2Q9Y608 721 aaKnown RBP16.7■□□□□ 0.26
PRKCSH-201ENST00000585325 MYH13Q9UKX3 1938 aa16.7■□□□□ 0.26
PRKCSH-201ENST00000585325 TCP10L2B9ZVM9 353 aa16.69■□□□□ 0.26
PRKCSH-201ENST00000585325 FBXO46Q6PJ61 603 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-201ENST00000585325 ATG9AQ7Z3C6 839 aa16.69■□□□□ 0.26
PRKCSH-201ENST00000585325 LPIN2Q92539 896 aa16.69■□□□□ 0.26
PRKCSH-201ENST00000585325 TEKT1Q969V4 418 aa16.69■□□□□ 0.26
PRKCSH-201ENST00000585325 IREB2P48200 963 aaKnown RBP16.68■□□□□ 0.26
PRKCSH-201ENST00000585325 TNNI2P48788 182 aa16.68■□□□□ 0.26
PRKCSH-201ENST00000585325 CLMNQ96JQ2 1002 aa16.68■□□□□ 0.26
PRKCSH-201ENST00000585325 MEIS3Q99687 375 aa16.68■□□□□ 0.26
PRKCSH-201ENST00000585325 FBXO3Q9UK99 471 aa16.68■□□□□ 0.26
PRKCSH-201ENST00000585325 MAST3O60307 1309 aa16.68■□□□□ 0.26
PRKCSH-201ENST00000585325 GPR25O00155 361 aa16.67■□□□□ 0.26
PRKCSH-201ENST00000585325 USP2O75604 605 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-201ENST00000585325 CIAO1O76071 339 aa16.67■□□□□ 0.26
PRKCSH-201ENST00000585325 HDLBPQ00341 1268 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-201ENST00000585325 ATP2B3Q16720 1220 aa16.67■□□□□ 0.26
PRKCSH-201ENST00000585325 ARHGAP45Q92619 1136 aa16.67■□□□□ 0.26
PRKCSH-201ENST00000585325 WNK4Q96J92 1243 aa16.67■□□□□ 0.26
PRKCSH-201ENST00000585325 CEP126Q9P2H0 1117 aa16.67■□□□□ 0.26
PRKCSH-201ENST00000585325 MANSC4A6NHS7 340 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-201ENST00000585325 UNCXA6NJT0 531 aa16.66■□□□□ 0.26
PRKCSH-201ENST00000585325 ZBTB48P10074 688 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-201ENST00000585325 CDAN1Q8IWY9 1227 aa16.66■□□□□ 0.26
PRKCSH-201ENST00000585325 ANKRD13AQ8IZ07 590 aa16.66■□□□□ 0.26
PRKCSH-201ENST00000585325 TMEM39BQ9GZU3 492 aa16.66■□□□□ 0.26
PRKCSH-201ENST00000585325 PA2G4Q9UQ80 394 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-201ENST00000585325 OTOFQ9HC10 1997 aa16.66■□□□□ 0.26
PRKCSH-201ENST00000585325 IPO8O15397 1037 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-201ENST00000585325 GNAI3P08754 354 aa16.65■□□□□ 0.26
PRKCSH-201ENST00000585325 IL15P40933 162 aaPredicted RBP16.65■□□□□ 0.26
PRKCSH-201ENST00000585325 CACNB3P54284 484 aa16.65■□□□□ 0.26
PRKCSH-201ENST00000585325 NOM1Q5C9Z4 860 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-201ENST00000585325 INTS3Q68E01 1043 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-201ENST00000585325 WDR66Q8TBY9 1149 aa16.65■□□□□ 0.26
PRKCSH-201ENST00000585325 FRAT1Q92837 279 aaPredicted RBP16.65■□□□□ 0.26
PRKCSH-201ENST00000585325 ZDHHC15Q96MV8 337 aa16.65■□□□□ 0.26
PRKCSH-201ENST00000585325 TEPSINQ96N21 525 aa16.65■□□□□ 0.26
PRKCSH-201ENST00000585325 TMOD2Q9NZR1 351 aa16.65■□□□□ 0.26
PRKCSH-201ENST00000585325 SUGT1Q9Y2Z0 365 aa16.65■□□□□ 0.26
PRKCSH-201ENST00000585325 ALDH1A1P00352 501 aa16.64■□□□□ 0.25
PRKCSH-201ENST00000585325 INHBEP58166 350 aa16.64■□□□□ 0.25
PRKCSH-201ENST00000585325 ELP3Q9H9T3 547 aa16.64■□□□□ 0.25
PRKCSH-201ENST00000585325 COPRSQ9NQ92 184 aa16.64■□□□□ 0.25
PRKCSH-201ENST00000585325 GNL3LQ9NVN8 582 aaKnown RBP16.64■□□□□ 0.25
PRKCSH-201ENST00000585325 FKTNO75072 461 aa16.63■□□□□ 0.25
PRKCSH-201ENST00000585325 BCAR3O75815 825 aa16.63■□□□□ 0.25
PRKCSH-201ENST00000585325 IFNL1Q8IU54 200 aa16.63■□□□□ 0.25
PRKCSH-201ENST00000585325 MRIQ9BWK5 157 aa16.63■□□□□ 0.25
PRKCSH-201ENST00000585325 LAMB1P07942 1786 aa16.63■□□□□ 0.25
PRKCSH-201ENST00000585325 SRGAP3O43295 1099 aa16.62■□□□□ 0.25
PRKCSH-201ENST00000585325 TRIM27P14373 513 aa16.62■□□□□ 0.25
PRKCSH-201ENST00000585325 HNRNPUQ00839 825 aaKnown RBP eCLIP16.62■□□□□ 0.25
PRKCSH-201ENST00000585325 APOBEC3HQ6NTF7 200 aaKnown RBP16.62■□□□□ 0.25
PRKCSH-201ENST00000585325 HHIPL2Q6UWX4 724 aa16.62■□□□□ 0.25
PRKCSH-201ENST00000585325 ATF7IPQ6VMQ6 1270 aa16.62■□□□□ 0.25
PRKCSH-201ENST00000585325 MIER1Q8N108 512 aa16.62■□□□□ 0.25
PRKCSH-201ENST00000585325 CLUAP1Q96AJ1 413 aa16.62■□□□□ 0.25
PRKCSH-201ENST00000585325 OPTNQ96CV9 577 aa16.62■□□□□ 0.25
PRKCSH-201ENST00000585325 CFHR5Q9BXR6 569 aa16.62■□□□□ 0.25
PRKCSH-201ENST00000585325 TNNQ9UQP3 1299 aa16.62■□□□□ 0.25
PRKCSH-201ENST00000585325 IGF2BP3O00425 579 aaKnown RBP eCLIP16.61■□□□□ 0.25
PRKCSH-201ENST00000585325 GJA5P36382 358 aa16.61■□□□□ 0.25
PRKCSH-201ENST00000585325 PHKA1P46020 1223 aa16.61■□□□□ 0.25
PRKCSH-201ENST00000585325 DIEXFQ68CQ4 756 aaKnown RBP16.61■□□□□ 0.25
PRKCSH-201ENST00000585325 R3HDMLQ9H3Y0 253 aa16.61■□□□□ 0.25
PRKCSH-201ENST00000585325 DENND2AQ9ULE3 1009 aa16.61■□□□□ 0.25
PRKCSH-201ENST00000585325 POTEFA5A3E0 1075 aa16.6■□□□□ 0.25
PRKCSH-201ENST00000585325 SEMA3EO15041 775 aa16.6■□□□□ 0.25
PRKCSH-201ENST00000585325 LDHBP07195 334 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-201ENST00000585325 PRDX5P30044 214 aa16.6■□□□□ 0.25
PRKCSH-201ENST00000585325 ADORA1P30542 326 aa16.6■□□□□ 0.25
PRKCSH-201ENST00000585325 MAP3K9P80192 1104 aa16.6■□□□□ 0.25
PRKCSH-201ENST00000585325 VGLL4Q14135 290 aa16.6■□□□□ 0.25
PRKCSH-201ENST00000585325 DIXDC1Q155Q3 683 aa16.6■□□□□ 0.25
PRKCSH-201ENST00000585325 OTUD7BQ6GQQ9 843 aa16.6■□□□□ 0.25
PRKCSH-201ENST00000585325 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-201ENST00000585325 FAM83AQ86UY5 434 aa16.6■□□□□ 0.25
PRKCSH-201ENST00000585325 CSADQ9Y600 493 aa16.6■□□□□ 0.25
PRKCSH-201ENST00000585325 GNAI2P04899 355 aa16.59■□□□□ 0.25
PRKCSH-201ENST00000585325 FXR1P51114 621 aaKnown RBP eCLIP16.59■□□□□ 0.25
PRKCSH-201ENST00000585325 MTX1Q13505 466 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms