RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 TNNI2P48788 182 aa18.86■□□□□ 0.61
VAPA-209ENST00000585042 SOX10P56693 466 aa18.86■□□□□ 0.61
VAPA-209ENST00000585042 ANKRD44Q8N8A2 993 aa18.86■□□□□ 0.61
VAPA-209ENST00000585042 TDRD3Q9H7E2 651 aaKnown RBP18.86■□□□□ 0.61
VAPA-209ENST00000585042 SUGT1Q9Y2Z0 365 aa18.86■□□□□ 0.61
VAPA-209ENST00000585042 TESPA1A2RU30 521 aaPredicted RBP18.85■□□□□ 0.61
VAPA-209ENST00000585042 SLC34A2O95436 690 aa18.85■□□□□ 0.61
VAPA-209ENST00000585042 CRKP46108 304 aa18.85■□□□□ 0.61
VAPA-209ENST00000585042 METTL24Q5JXM2 366 aa18.85■□□□□ 0.61
VAPA-209ENST00000585042 VGLL2Q8N8G2 317 aa18.85■□□□□ 0.61
VAPA-209ENST00000585042 USP44Q9H0E7 712 aa18.85■□□□□ 0.61
VAPA-209ENST00000585042 R3HDMLQ9H3Y0 253 aa18.85■□□□□ 0.61
VAPA-209ENST00000585042 AOX1Q06278 1338 aa18.84■□□□□ 0.61
VAPA-209ENST00000585042 FRAT2O75474 233 aaPredicted RBP18.84■□□□□ 0.61
VAPA-209ENST00000585042 ALDH1L2Q3SY69 923 aa18.84■□□□□ 0.61
VAPA-209ENST00000585042 LRRC24Q50LG9 513 aa18.84■□□□□ 0.61
VAPA-209ENST00000585042 TEPSINQ96N21 525 aa18.84■□□□□ 0.61
VAPA-209ENST00000585042 IGF2BP3O00425 579 aaKnown RBP eCLIP18.83■□□□□ 0.6
VAPA-209ENST00000585042 SLFN5Q08AF3 891 aa18.83■□□□□ 0.6
VAPA-209ENST00000585042 SSH1Q8WYL5 1049 aa18.83■□□□□ 0.6
VAPA-209ENST00000585042 IFIT1P09914 478 aaKnown RBP18.82■□□□□ 0.6
VAPA-209ENST00000585042 FKBP1CQ5VVH2 108 aa18.82■□□□□ 0.6
VAPA-209ENST00000585042 TEKT1Q969V4 418 aa18.82■□□□□ 0.6
VAPA-209ENST00000585042 MAST3O60307 1309 aa18.81■□□□□ 0.6
VAPA-209ENST00000585042 ARAP2Q8WZ64 1704 aa18.81■□□□□ 0.6
VAPA-209ENST00000585042 FGFR2P21802 821 aa18.81■□□□□ 0.6
VAPA-209ENST00000585042 GJA5P36382 358 aa18.81■□□□□ 0.6
VAPA-209ENST00000585042 MAP3K9P80192 1104 aa18.81■□□□□ 0.6
VAPA-209ENST00000585042 PUM3Q15397 648 aaKnown RBP18.81■□□□□ 0.6
VAPA-209ENST00000585042 INTS3Q68E01 1043 aaKnown RBP18.81■□□□□ 0.6
VAPA-209ENST00000585042 HOOK2Q96ED9 719 aa18.81■□□□□ 0.6
VAPA-209ENST00000585042 ERO1AQ96HE7 468 aa18.81■□□□□ 0.6
VAPA-209ENST00000585042 ZDHHC15Q96MV8 337 aa18.81■□□□□ 0.6
VAPA-209ENST00000585042 FBXO3Q9UK99 471 aa18.81■□□□□ 0.6
VAPA-209ENST00000585042 PDE4DIPQ5VU43 2346 aa18.8■□□□□ 0.6
VAPA-209ENST00000585042 TCP10L2B9ZVM9 353 aa18.8■□□□□ 0.6
VAPA-209ENST00000585042 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.8■□□□□ 0.6
VAPA-209ENST00000585042 FAM83AQ86UY5 434 aa18.8■□□□□ 0.6
VAPA-209ENST00000585042 OPTNQ96CV9 577 aa18.8■□□□□ 0.6
VAPA-209ENST00000585042 MS4A4AQ96JQ5 239 aa18.8■□□□□ 0.6
VAPA-209ENST00000585042 HDAC5Q9UQL6 1122 aa18.8■□□□□ 0.6
VAPA-209ENST00000585042 CT47B1P0C2W7 299 aaPredicted RBP18.79■□□□□ 0.6
VAPA-209ENST00000585042 BCAMP50895 628 aa18.79■□□□□ 0.6
VAPA-209ENST00000585042 GTF2A2P52657 109 aa18.79■□□□□ 0.6
VAPA-209ENST00000585042 CHAF1AQ13111 956 aaPredicted RBP18.79■□□□□ 0.6
VAPA-209ENST00000585042 HHIPL2Q6UWX4 724 aa18.79■□□□□ 0.6
VAPA-209ENST00000585042 OTOP1Q7RTM1 612 aa18.79■□□□□ 0.6
VAPA-209ENST00000585042 LPIN2Q92539 896 aa18.79■□□□□ 0.6
VAPA-209ENST00000585042 PTPN18Q99952 460 aa18.79■□□□□ 0.6
VAPA-209ENST00000585042 TMEM39BQ9GZU3 492 aa18.79■□□□□ 0.6
VAPA-209ENST00000585042 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.79■□□□□ 0.6
VAPA-209ENST00000585042 IQSEC3Q9UPP2 1182 aaPredicted RBP18.79■□□□□ 0.6
VAPA-209ENST00000585042 EYA2O00167 538 aa18.78■□□□□ 0.6
VAPA-209ENST00000585042 CRHR2Q13324 411 aa18.78■□□□□ 0.6
VAPA-209ENST00000585042 GRIK5Q16478 980 aa18.78■□□□□ 0.6
VAPA-209ENST00000585042 TRMT2AQ8IZ69 625 aaKnown RBP18.78■□□□□ 0.6
VAPA-209ENST00000585042 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.78■□□□□ 0.6
VAPA-209ENST00000585042 WDR66Q8TBY9 1149 aa18.78■□□□□ 0.6
VAPA-209ENST00000585042 ELP3Q9H9T3 547 aa18.78■□□□□ 0.6
VAPA-209ENST00000585042 TMOD2Q9NZR1 351 aa18.78■□□□□ 0.6
VAPA-209ENST00000585042 TRIM17Q9Y577 477 aa18.78■□□□□ 0.6
VAPA-209ENST00000585042 CSADQ9Y600 493 aa18.78■□□□□ 0.6
VAPA-209ENST00000585042 RFX5P48382 616 aaPredicted RBP18.77■□□□□ 0.6
VAPA-209ENST00000585042 SP3Q02447 781 aa18.77■□□□□ 0.6
VAPA-209ENST00000585042 ARHGEF6Q15052 776 aa18.77■□□□□ 0.6
VAPA-209ENST00000585042 KLHDC4Q8TBB5 520 aa18.77■□□□□ 0.6
VAPA-209ENST00000585042 ZBTB22O15209 634 aa18.76■□□□□ 0.59
VAPA-209ENST00000585042 SLC5A1P13866 664 aa18.76■□□□□ 0.59
VAPA-209ENST00000585042 VGLL4Q14135 290 aa18.76■□□□□ 0.59
VAPA-209ENST00000585042 PRPF38BQ5VTL8 546 aaKnown RBP18.76■□□□□ 0.59
VAPA-209ENST00000585042 APOBEC3HQ6NTF7 200 aaKnown RBP18.76■□□□□ 0.59
VAPA-209ENST00000585042 PTPN22Q9Y2R2 807 aa18.76■□□□□ 0.59
VAPA-209ENST00000585042 CIAO1O76071 339 aa18.75■□□□□ 0.59
VAPA-209ENST00000585042 EFCC1Q9HA90 598 aa18.75■□□□□ 0.59
VAPA-209ENST00000585042 ZFYVE28Q9HCC9 887 aa18.75■□□□□ 0.59
VAPA-209ENST00000585042 ZCCHC17Q9NP64 241 aaKnown RBP18.75■□□□□ 0.59
VAPA-209ENST00000585042 SPDYE5A6NIY4 337 aa18.74■□□□□ 0.59
VAPA-209ENST00000585042 WDHD1O75717 1129 aaPredicted RBP18.74■□□□□ 0.59
VAPA-209ENST00000585042 DCAF15Q66K64 600 aa18.74■□□□□ 0.59
VAPA-209ENST00000585042 ATG9AQ7Z3C6 839 aa18.74■□□□□ 0.59
VAPA-209ENST00000585042 ERO1BQ86YB8 467 aa18.74■□□□□ 0.59
VAPA-209ENST00000585042 CDAN1Q8IWY9 1227 aa18.74■□□□□ 0.59
VAPA-209ENST00000585042 SMC4Q9NTJ3 1288 aa18.74■□□□□ 0.59
VAPA-209ENST00000585042 RNF216Q9NWF9 866 aaPredicted RBP18.74■□□□□ 0.59
VAPA-209ENST00000585042 OTOFQ9HC10 1997 aa18.73■□□□□ 0.59
VAPA-209ENST00000585042 RPAP1Q9BWH6 1393 aaPredicted RBP18.73■□□□□ 0.59
VAPA-209ENST00000585042 CCL15-CCL14A0A0B4J2E2 113 aa18.73■□□□□ 0.59
VAPA-209ENST00000585042 UBTFL1P0CB47 393 aaPredicted RBP18.73■□□□□ 0.59
VAPA-209ENST00000585042 CETPP11597 493 aa18.73■□□□□ 0.59
VAPA-209ENST00000585042 CCL15Q16663 113 aa18.73■□□□□ 0.59
VAPA-209ENST00000585042 CD99L2Q8TCZ2 262 aa18.73■□□□□ 0.59
VAPA-209ENST00000585042 BRI3BPQ8WY22 251 aa18.73■□□□□ 0.59
VAPA-209ENST00000585042 GNL3LQ9NVN8 582 aaKnown RBP18.73■□□□□ 0.59
VAPA-209ENST00000585042 CEP126Q9P2H0 1117 aa18.73■□□□□ 0.59
VAPA-209ENST00000585042 SEMA3EO15041 775 aa18.72■□□□□ 0.59
VAPA-209ENST00000585042 FAM151AQ8WW52 585 aa18.72■□□□□ 0.59
VAPA-209ENST00000585042 API5Q9BZZ5 524 aaKnown RBP18.72■□□□□ 0.59
VAPA-209ENST00000585042 CACNB3P54284 484 aa18.71■□□□□ 0.59
VAPA-209ENST00000585042 TAF1CQ15572 869 aaPredicted RBP18.71■□□□□ 0.59
VAPA-209ENST00000585042 ARMC5Q96C12 935 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms