RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 RBM5P52756 815 aaKnown RBP eCLIP16.91■□□□□ 0.38e-14■■■■□ 26.3
TRAF4-215ENST00000584944 DACT2Q5SW24 774 aa16.91■□□□□ 0.3
TRAF4-215ENST00000584944 ERICH6BQ5W0A0 696 aa16.91■□□□□ 0.3
TRAF4-215ENST00000584944 KIAA0825Q8IV33 1275 aa16.91■□□□□ 0.3
TRAF4-215ENST00000584944 MICALL2Q8IY33 904 aa16.91■□□□□ 0.3
TRAF4-215ENST00000584944 SPATA5Q8NB90 893 aa16.91■□□□□ 0.3
TRAF4-215ENST00000584944 DPF2Q92785 391 aa16.91■□□□□ 0.3
TRAF4-215ENST00000584944 TLR7Q9NYK1 1049 aaKnown RBP16.91■□□□□ 0.3
TRAF4-215ENST00000584944 ABCF2Q9UG63 623 aa16.91■□□□□ 0.3
TRAF4-215ENST00000584944 FAM205AQ6ZU69 1335 aa16.91■□□□□ 0.3
TRAF4-215ENST00000584944 RASGRF1Q13972 1273 aa16.9■□□□□ 0.3
TRAF4-215ENST00000584944 PAXIP1Q6ZW49 1069 aaPredicted RBP16.9■□□□□ 0.3
TRAF4-215ENST00000584944 SAPCD2Q86UD0 394 aa16.9■□□□□ 0.3
TRAF4-215ENST00000584944 LRP2BPQ9P2M1 347 aa16.9■□□□□ 0.3
TRAF4-215ENST00000584944 MAST3O60307 1309 aa16.9■□□□□ 0.3
TRAF4-215ENST00000584944 ERC2O15083 957 aa16.89■□□□□ 0.29
TRAF4-215ENST00000584944 LDHBP07195 334 aaKnown RBP16.89■□□□□ 0.29
TRAF4-215ENST00000584944 ARID4AP29374 1257 aaPredicted RBP16.89■□□□□ 0.29
TRAF4-215ENST00000584944 MMP14P50281 582 aa16.89■□□□□ 0.29
TRAF4-215ENST00000584944 FKBP1AP62942 108 aaKnown RBP16.89■□□□□ 0.29
TRAF4-215ENST00000584944 RBM26Q5T8P6 1007 aaKnown RBP16.89■□□□□ 0.29
TRAF4-215ENST00000584944 CDC37L1Q7L3B6 337 aa16.89■□□□□ 0.29
TRAF4-215ENST00000584944 DZIP1Q86YF9 867 aaKnown RBP16.89■□□□□ 0.29
TRAF4-215ENST00000584944 SMC5Q8IY18 1101 aa16.89■□□□□ 0.29
TRAF4-215ENST00000584944 MXD3Q9BW11 206 aa16.89■□□□□ 0.29
TRAF4-215ENST00000584944 LNPKQ9C0E8 428 aa16.89■□□□□ 0.29
TRAF4-215ENST00000584944 SNRKQ9NRH2 765 aa16.89■□□□□ 0.29
TRAF4-215ENST00000584944 ECHDC1Q9NTX5 307 aa16.89■□□□□ 0.29
TRAF4-215ENST00000584944 MAP2K2P36507 400 aa16.88■□□□□ 0.29
TRAF4-215ENST00000584944 GRM1Q13255 1194 aa16.88■□□□□ 0.29
TRAF4-215ENST00000584944 CENPQQ7L2Z9 268 aaPredicted RBP16.88■□□□□ 0.29
TRAF4-215ENST00000584944 CHD1LQ86WJ1 897 aa16.88■□□□□ 0.29
TRAF4-215ENST00000584944 SLF2Q8IX21 1173 aa16.88■□□□□ 0.29
TRAF4-215ENST00000584944 HHIPL1Q96JK4 782 aa16.88■□□□□ 0.29
TRAF4-215ENST00000584944 ZNF512BQ96KM6 892 aaPredicted RBP16.88■□□□□ 0.29
TRAF4-215ENST00000584944 DNAJC2Q99543 621 aaKnown RBP16.88■□□□□ 0.29
TRAF4-215ENST00000584944 RAI14Q9P0K7 980 aa16.88■□□□□ 0.29
TRAF4-215ENST00000584944 TTF2Q9UNY4 1162 aaKnown RBP16.88■□□□□ 0.29
TRAF4-215ENST00000584944 SUGT1Q9Y2Z0 365 aa16.88■□□□□ 0.29
TRAF4-215ENST00000584944 PDS5AQ29RF7 1337 aaKnown RBP16.88■□□□□ 0.29
TRAF4-215ENST00000584944 MYO1BO43795 1136 aa16.87■□□□□ 0.29
TRAF4-215ENST00000584944 AOC2O75106 756 aa16.87■□□□□ 0.29
TRAF4-215ENST00000584944 MX1P20591 662 aa16.87■□□□□ 0.29
TRAF4-215ENST00000584944 NUCB1Q02818 461 aa16.87■□□□□ 0.29
TRAF4-215ENST00000584944 TTF1Q15361 905 aaPredicted RBP16.87■□□□□ 0.29
TRAF4-215ENST00000584944 ERICH6Q7L0X2 663 aa16.87■□□□□ 0.29
TRAF4-215ENST00000584944 HMG20BQ9P0W2 317 aa16.87■□□□□ 0.29
TRAF4-215ENST00000584944 ARAP2Q8WZ64 1704 aa16.87■□□□□ 0.29
TRAF4-215ENST00000584944 MCAMP43121 646 aa16.86■□□□□ 0.29
TRAF4-215ENST00000584944 DLGAP5Q15398 846 aa16.86■□□□□ 0.29
TRAF4-215ENST00000584944 KIF4BQ2VIQ3 1234 aa16.86■□□□□ 0.29
TRAF4-215ENST00000584944 TBC1D10BQ4KMP7 808 aaPredicted RBP16.86■□□□□ 0.29
TRAF4-215ENST00000584944 SAMD7Q7Z3H4 446 aa16.86■□□□□ 0.29
TRAF4-215ENST00000584944 TEKT1Q969V4 418 aa16.86■□□□□ 0.29
TRAF4-215ENST00000584944 NOL10Q9BSC4 688 aaKnown RBP16.86■□□□□ 0.29
TRAF4-215ENST00000584944 BEGAINQ9BUH8 593 aa16.86■□□□□ 0.29
TRAF4-215ENST00000584944 PPP4R2Q9NY27 417 aa16.86■□□□□ 0.29
TRAF4-215ENST00000584944 POLR2AP24928 1970 aaKnown RBP16.86■□□□□ 0.29
TRAF4-215ENST00000584944 ATP5JP18859 108 aa16.85■□□□□ 0.29
TRAF4-215ENST00000584944 GSTO1P78417 241 aa16.85■□□□□ 0.29
TRAF4-215ENST00000584944 PI16Q6UXB8 463 aa16.85■□□□□ 0.29
TRAF4-215ENST00000584944 USP48Q86UV5 1035 aa16.85■□□□□ 0.29
TRAF4-215ENST00000584944 ZNF408Q9H9D4 720 aa16.85■□□□□ 0.29
TRAF4-215ENST00000584944 MYOZ2Q9NPC6 264 aa16.85■□□□□ 0.29
TRAF4-215ENST00000584944 TTC41PQ6P2S7 1318 aa16.85■□□□□ 0.29
TRAF4-215ENST00000584944 IDH1O75874 414 aaKnown RBP16.84■□□□□ 0.29
TRAF4-215ENST00000584944 EGFRP00533 1210 aa16.84■□□□□ 0.29
TRAF4-215ENST00000584944 ZAP70P43403 619 aa16.84■□□□□ 0.29
TRAF4-215ENST00000584944 CERS5Q8N5B7 392 aa16.84■□□□□ 0.29
TRAF4-215ENST00000584944 BOLA2Q9H3K6 86 aa16.84■□□□□ 0.29
TRAF4-215ENST00000584944 SALL1Q9NSC2 1324 aa16.84■□□□□ 0.29
TRAF4-215ENST00000584944 SCN9AQ15858 1988 aa16.84■□□□□ 0.29
TRAF4-215ENST00000584944 GOLIM4O00461 696 aa16.83■□□□□ 0.28
TRAF4-215ENST00000584944 GLRX3O76003 335 aaKnown RBP16.83■□□□□ 0.28
TRAF4-215ENST00000584944 MAP3K12Q12852 859 aa16.83■□□□□ 0.28
TRAF4-215ENST00000584944 SCARF1Q14162 830 aa16.83■□□□□ 0.28
TRAF4-215ENST00000584944 LRRFIP1Q32MZ4 808 aaKnown RBP16.83■□□□□ 0.28
TRAF4-215ENST00000584944 DLK2Q6UY11 383 aa16.83■□□□□ 0.28
TRAF4-215ENST00000584944 TBC1D9Q6ZT07 1266 aa16.83■□□□□ 0.28
TRAF4-215ENST00000584944 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.83■□□□□ 0.28
TRAF4-215ENST00000584944 GMLQ99445 158 aa16.83■□□□□ 0.28
TRAF4-215ENST00000584944 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.83■□□□□ 0.282e-8■■□□□ 13.1
TRAF4-215ENST00000584944 PAG1Q9NWQ8 432 aa16.83■□□□□ 0.28
TRAF4-215ENST00000584944 SERPINA10Q9UK55 444 aa16.83■□□□□ 0.28
TRAF4-215ENST00000584944 MYH13Q9UKX3 1938 aa16.82■□□□□ 0.28
TRAF4-215ENST00000584944 ZBTB22O15209 634 aa16.82■□□□□ 0.28
TRAF4-215ENST00000584944 LDHCP07864 332 aa16.82■□□□□ 0.28
TRAF4-215ENST00000584944 PRDX5P30044 214 aa16.82■□□□□ 0.28
TRAF4-215ENST00000584944 ZNF280AP59817 542 aaPredicted RBP16.82■□□□□ 0.28
TRAF4-215ENST00000584944 CFAP100Q494V2 611 aa16.82■□□□□ 0.28
TRAF4-215ENST00000584944 KRT26Q7Z3Y9 468 aa16.82■□□□□ 0.28
TRAF4-215ENST00000584944 DCPSQ96C86 337 aaKnown RBP16.82■□□□□ 0.28
TRAF4-215ENST00000584944 ABHD8Q96I13 439 aa16.82■□□□□ 0.28
TRAF4-215ENST00000584944 TMOD2Q9NZR1 351 aa16.82■□□□□ 0.28
TRAF4-215ENST00000584944 CRKP46108 304 aa16.81■□□□□ 0.28
TRAF4-215ENST00000584944 HDLBPQ00341 1268 aaKnown RBP16.81■□□□□ 0.28
TRAF4-215ENST00000584944 TSHZ3Q63HK5 1081 aa16.81■□□□□ 0.28
TRAF4-215ENST00000584944 NAA16Q6N069 864 aaPredicted RBP16.81■□□□□ 0.28
TRAF4-215ENST00000584944 HAUS7Q99871 368 aa16.81■□□□□ 0.28
TRAF4-215ENST00000584944 TSKSQ9UJT2 592 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms